RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 SLITRK1Q96PX8 696 aa26.53■■□□□ 1.84
ROM1-201ENST00000278833 NIF3L1Q9GZT8 377 aa26.53■■□□□ 1.84
ROM1-201ENST00000278833 ABT1Q9ULW3 272 aaKnown RBP26.53■■□□□ 1.84
ROM1-201ENST00000278833 DRG1Q9Y295 367 aaKnown RBP26.53■■□□□ 1.84
ROM1-201ENST00000278833 CCT8L1PA6NM43 557 aa26.52■■□□□ 1.84
ROM1-201ENST00000278833 O00370 1275 aa26.52■■□□□ 1.84
ROM1-201ENST00000278833 LONRF1Q17RB8 773 aa26.52■■□□□ 1.84
ROM1-201ENST00000278833 IZUMO3Q5VZ72 239 aa26.52■■□□□ 1.84
ROM1-201ENST00000278833 UHMK1Q8TAS1 419 aaKnown RBP26.52■■□□□ 1.84
ROM1-201ENST00000278833 TCP11Q8WWU5 503 aa26.52■■□□□ 1.84
ROM1-201ENST00000278833 FAXDC2Q96IV6 333 aa26.52■■□□□ 1.84
ROM1-201ENST00000278833 PRMT1Q99873 361 aaKnown RBP26.52■■□□□ 1.84
ROM1-201ENST00000278833 SAMD15Q9P1V8 674 aa26.52■■□□□ 1.84
ROM1-201ENST00000278833 TLL2Q9Y6L7 1015 aa26.52■■□□□ 1.84
ROM1-201ENST00000278833 ABLIM1O14639 778 aa26.51■■□□□ 1.83
ROM1-201ENST00000278833 OGTO15294 1046 aa26.51■■□□□ 1.83
ROM1-201ENST00000278833 LIASO43766 372 aa26.51■■□□□ 1.83
ROM1-201ENST00000278833 STAT5BP51692 787 aa26.51■■□□□ 1.83
ROM1-201ENST00000278833 METTL7BQ6UX53 244 aa26.51■■□□□ 1.83
ROM1-201ENST00000278833 ANKRD35Q8N283 1001 aa26.51■■□□□ 1.83
ROM1-201ENST00000278833 DDX56Q9NY93 547 aaKnown RBP26.51■■□□□ 1.83
ROM1-201ENST00000278833 ANK1P16157 1881 aa26.51■■□□□ 1.83
ROM1-201ENST00000278833 DNM1LO00429 736 aa26.51■■□□□ 1.83
ROM1-201ENST00000278833 CDH16O75309 829 aa26.51■■□□□ 1.83
ROM1-201ENST00000278833 EIF4BP23588 611 aaKnown RBP26.51■■□□□ 1.83
ROM1-201ENST00000278833 SCTRP47872 440 aa26.51■■□□□ 1.83
ROM1-201ENST00000278833 HUNKP57058 714 aa26.51■■□□□ 1.83
ROM1-201ENST00000278833 CNTN2Q02246 1040 aa26.51■■□□□ 1.83
ROM1-201ENST00000278833 XRCC4Q13426 336 aa26.51■■□□□ 1.83
ROM1-201ENST00000278833 CCDC142Q17RM4 750 aa26.51■■□□□ 1.83
ROM1-201ENST00000278833 TMEM35BQ8NCS4 154 aa26.51■■□□□ 1.83
ROM1-201ENST00000278833 PHACTR1Q9C0D0 580 aa26.51■■□□□ 1.83
ROM1-201ENST00000278833 C2orf40Q9H1Z8 148 aa26.51■■□□□ 1.83
ROM1-201ENST00000278833 IGKV6-21A0A0C4DH24 114 aa26.5■■□□□ 1.83
ROM1-201ENST00000278833 LGR5O75473 907 aa26.5■■□□□ 1.83
ROM1-201ENST00000278833 TJP3O95049 919 aa26.5■■□□□ 1.83
ROM1-201ENST00000278833 GSCP56915 257 aaPredicted RBP26.5■■□□□ 1.83
ROM1-201ENST00000278833 ZNF252P-AS1Q0IIN9 211 aa26.5■■□□□ 1.83
ROM1-201ENST00000278833 PIGHQ14442 188 aaPredicted RBP26.5■■□□□ 1.83
ROM1-201ENST00000278833 SGSM1Q2NKQ1 1148 aa26.5■■□□□ 1.83
ROM1-201ENST00000278833 C2CD6Q53TS8 623 aa26.5■■□□□ 1.83
ROM1-201ENST00000278833 SWT1Q5T5J6 900 aaKnown RBP26.5■■□□□ 1.83
ROM1-201ENST00000278833 SEPT14Q6ZU15 432 aa26.5■■□□□ 1.83
ROM1-201ENST00000278833 SEPT1Q8WYJ6 367 aa26.5■■□□□ 1.83
ROM1-201ENST00000278833 ACO2Q99798 780 aaKnown RBP26.5■■□□□ 1.83
ROM1-201ENST00000278833 CPSF3Q9UKF6 684 aaKnown RBP26.5■■□□□ 1.83
ROM1-201ENST00000278833 EFR3BQ9Y2G0 817 aa26.5■■□□□ 1.83
ROM1-201ENST00000278833 OTOFQ9HC10 1997 aa26.5■■□□□ 1.83
ROM1-201ENST00000278833 DNALI1O14645 258 aaPredicted RBP26.49■■□□□ 1.83
ROM1-201ENST00000278833 IREB2P48200 963 aaKnown RBP26.49■■□□□ 1.83
ROM1-201ENST00000278833 MKRN3Q13064 507 aaKnown RBP26.49■■□□□ 1.83
ROM1-201ENST00000278833 MXD4Q14582 209 aaPredicted RBP26.49■■□□□ 1.83
ROM1-201ENST00000278833 KYNUQ16719 465 aa26.49■■□□□ 1.83
ROM1-201ENST00000278833 POLNQ7Z5Q5 900 aa26.49■■□□□ 1.83
ROM1-201ENST00000278833 ANKS1BQ7Z6G8 1248 aa26.49■■□□□ 1.83
ROM1-201ENST00000278833 PHLDB2Q86SQ0 1253 aa26.49■■□□□ 1.83
ROM1-201ENST00000278833 TTC25Q96NG3 672 aa26.49■■□□□ 1.83
ROM1-201ENST00000278833 CCDC77Q9BR77 488 aa26.49■■□□□ 1.83
ROM1-201ENST00000278833 HEMGNQ9BXL5 484 aa26.49■■□□□ 1.83
ROM1-201ENST00000278833 TMEM120BA0PK00 339 aa26.49■■□□□ 1.83
ROM1-201ENST00000278833 PROZP22891 400 aa26.49■■□□□ 1.83
ROM1-201ENST00000278833 YWHAEP62258 255 aaKnown RBP26.49■■□□□ 1.83
ROM1-201ENST00000278833 LDLRAD1Q5T700 205 aa26.49■■□□□ 1.83
ROM1-201ENST00000278833 DNAJC24Q6P3W2 148 aa26.49■■□□□ 1.83
ROM1-201ENST00000278833 TDRPQ86YL5 185 aa26.49■■□□□ 1.83
ROM1-201ENST00000278833 ALLCQ8N6M5 410 aa26.49■■□□□ 1.83
ROM1-201ENST00000278833 NKD2Q969F2 451 aaPredicted RBP26.49■■□□□ 1.83
ROM1-201ENST00000278833 FRMD8P1Q9BZ68 369 aaPredicted RBP26.49■■□□□ 1.83
ROM1-201ENST00000278833 PPCSQ9HAB8 311 aa26.49■■□□□ 1.83
ROM1-201ENST00000278833 ZSWIM8A7E2V4 1837 aa26.48■■□□□ 1.83
ROM1-201ENST00000278833 CD58P19256 250 aa26.48■■□□□ 1.83
ROM1-201ENST00000278833 DUOXA2Q1HG44 320 aa26.48■■□□□ 1.83
ROM1-201ENST00000278833 SPRED3Q2MJR0 410 aa26.48■■□□□ 1.83
ROM1-201ENST00000278833 CKAP2Q8WWK9 683 aa26.48■■□□□ 1.83
ROM1-201ENST00000278833 SLC40A1Q9NP59 571 aa26.48■■□□□ 1.83
ROM1-201ENST00000278833 SLC12A4Q9UP95 1085 aa26.48■■□□□ 1.83
ROM1-201ENST00000278833 SOWAHBA6NEL2 793 aa26.47■■□□□ 1.83
ROM1-201ENST00000278833 SNX3O60493 162 aa26.47■■□□□ 1.83
ROM1-201ENST00000278833 NR1H3Q13133 447 aa26.47■■□□□ 1.83
ROM1-201ENST00000278833 RASA2Q15283 850 aa26.47■■□□□ 1.83
ROM1-201ENST00000278833 LLGL1Q15334 1064 aa26.47■■□□□ 1.83
ROM1-201ENST00000278833 TRIP13Q15645 432 aaPredicted RBP26.47■■□□□ 1.83
ROM1-201ENST00000278833 DAB2IPQ5VWQ8 1189 aa26.47■■□□□ 1.83
ROM1-201ENST00000278833 SPOCD1Q6ZMY3 1216 aa26.47■■□□□ 1.83
ROM1-201ENST00000278833 ZBTB8OSQ8IWT0 167 aa26.47■■□□□ 1.83
ROM1-201ENST00000278833 PRPF31Q8WWY3 499 aaKnown RBP26.47■■□□□ 1.83
ROM1-201ENST00000278833 STRIP2Q9ULQ0 834 aa26.47■■□□□ 1.83
ROM1-201ENST00000278833 SNCAIPQ9Y6H5 919 aa26.47■■□□□ 1.83
ROM1-201ENST00000278833 KRT1P04264 644 aa26.47■■□□□ 1.83
ROM1-201ENST00000278833 OASLQ15646 514 aaKnown RBP26.47■■□□□ 1.83
ROM1-201ENST00000278833 CLMNQ96JQ2 1002 aa26.47■■□□□ 1.83
ROM1-201ENST00000278833 PLCD4Q9BRC7 762 aa26.47■■□□□ 1.83
ROM1-201ENST00000278833 CISHQ9NSE2 258 aa26.47■■□□□ 1.83
ROM1-201ENST00000278833 hCG_1818297A0A087WSY0 165 aa26.46■■□□□ 1.83
ROM1-201ENST00000278833 B4GALT4O60513 344 aa26.46■■□□□ 1.83
ROM1-201ENST00000278833 CST3P01034 146 aaPredicted RBP26.46■■□□□ 1.83
ROM1-201ENST00000278833 TNFSF9P41273 254 aa26.46■■□□□ 1.83
ROM1-201ENST00000278833 SLC18A1P54219 525 aa26.46■■□□□ 1.83
ROM1-201ENST00000278833 RPL7AP62424 266 aaKnown RBP26.46■■□□□ 1.83
ROM1-201ENST00000278833 MORF4L2Q15014 288 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 138.8 ms