RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 MXRA8Q9BRK3 442 aa13.83□□□□□ -0.2
COL1A1-201ENST00000225964 VCPKMTQ9H867 229 aa13.83□□□□□ -0.2
COL1A1-201ENST00000225964 ZNF229Q9UJW7 825 aa13.83□□□□□ -0.2
COL1A1-201ENST00000225964 ITIH6Q6UXX5 1313 aa13.83□□□□□ -0.2
COL1A1-201ENST00000225964 PGM1P36871 562 aa13.83□□□□□ -0.2
COL1A1-201ENST00000225964 TRPC1P48995 793 aa13.83□□□□□ -0.2
COL1A1-201ENST00000225964 ZNF200P98182 395 aaPredicted RBP13.83□□□□□ -0.2
COL1A1-201ENST00000225964 PDIA5Q14554 519 aa13.83□□□□□ -0.2
COL1A1-201ENST00000225964 CALML6Q8TD86 181 aa13.83□□□□□ -0.2
COL1A1-201ENST00000225964 NFKBIZQ9BYH8 718 aa13.83□□□□□ -0.2
COL1A1-201ENST00000225964 ETNK1Q9HBU6 452 aa13.83□□□□□ -0.2
COL1A1-201ENST00000225964 DPP3Q9NY33 737 aa13.83□□□□□ -0.2
COL1A1-201ENST00000225964 CHD1O14646 1710 aa13.83□□□□□ -0.2
COL1A1-201ENST00000225964 PREX2Q70Z35 1606 aa13.83□□□□□ -0.2
COL1A1-201ENST00000225964 TCP11X1B4DZS4 312 aa13.83□□□□□ -0.2
COL1A1-201ENST00000225964 YY1P25490 414 aa13.83□□□□□ -0.2
COL1A1-201ENST00000225964 MKRN4PQ13434 485 aaPredicted RBP13.83□□□□□ -0.2
COL1A1-201ENST00000225964 E4F1Q66K89 784 aaPredicted RBP13.83□□□□□ -0.2
COL1A1-201ENST00000225964 SHC4Q6S5L8 630 aa13.83□□□□□ -0.2
COL1A1-201ENST00000225964 TEX9Q8N6V9 391 aa13.83□□□□□ -0.2
COL1A1-201ENST00000225964 AGBL1Q96MI9 1066 aa13.83□□□□□ -0.2
COL1A1-201ENST00000225964 PI4K2AQ9BTU6 479 aa13.83□□□□□ -0.2
COL1A1-201ENST00000225964 RFX7Q2KHR2 1363 aa13.82□□□□□ -0.2
COL1A1-201ENST00000225964 PRR23D1E9PI22 279 aaPredicted RBP13.82□□□□□ -0.2
COL1A1-201ENST00000225964 PRR23D2P0DMB1 279 aaPredicted RBP13.82□□□□□ -0.2
COL1A1-201ENST00000225964 ALOX15P16050 662 aaPredicted RBP13.82□□□□□ -0.2
COL1A1-201ENST00000225964 DPEP1P16444 411 aa13.82□□□□□ -0.2
COL1A1-201ENST00000225964 SLC11A2P49281 568 aa13.82□□□□□ -0.2
COL1A1-201ENST00000225964 RAD23BP54727 409 aa13.82□□□□□ -0.2
COL1A1-201ENST00000225964 POLD3Q15054 466 aaPredicted RBP13.82□□□□□ -0.2
COL1A1-201ENST00000225964 EFHC1Q5JVL4 640 aa13.82□□□□□ -0.2
COL1A1-201ENST00000225964 GPAT2Q6NUI2 795 aa13.82□□□□□ -0.2
COL1A1-201ENST00000225964 PLD3Q8IV08 490 aa13.82□□□□□ -0.2
COL1A1-201ENST00000225964 TMEM169Q96HH4 297 aa13.82□□□□□ -0.2
COL1A1-201ENST00000225964 NDEL1Q9GZM8 345 aa13.82□□□□□ -0.2
COL1A1-201ENST00000225964 PGK2P07205 417 aa13.82□□□□□ -0.2
COL1A1-201ENST00000225964 CDH2P19022 906 aaPredicted RBP13.82□□□□□ -0.2
COL1A1-201ENST00000225964 AVPR1AP37288 418 aa13.82□□□□□ -0.2
COL1A1-201ENST00000225964 TBL3Q12788 808 aaKnown RBP13.82□□□□□ -0.2
COL1A1-201ENST00000225964 STX3Q13277 289 aa13.82□□□□□ -0.2
COL1A1-201ENST00000225964 LONRF1Q17RB8 773 aa13.82□□□□□ -0.2
COL1A1-201ENST00000225964 JADE3Q92613 823 aa13.82□□□□□ -0.2
COL1A1-201ENST00000225964 PRMT7Q9NVM4 692 aaPredicted RBP13.82□□□□□ -0.2
COL1A1-201ENST00000225964 WWOXQ9NZC7 414 aa13.82□□□□□ -0.2
COL1A1-201ENST00000225964 ENTPD3O75355 529 aa13.82□□□□□ -0.2
COL1A1-201ENST00000225964 TAF6P49848 677 aa13.82□□□□□ -0.2
COL1A1-201ENST00000225964 MAPRE1Q15691 268 aaKnown RBP13.82□□□□□ -0.2
COL1A1-201ENST00000225964 TRIM60Q495X7 471 aa13.82□□□□□ -0.2
COL1A1-201ENST00000225964 ANKRD13AQ8IZ07 590 aa13.82□□□□□ -0.2
COL1A1-201ENST00000225964 SCFD2Q8WU76 684 aa13.82□□□□□ -0.2
COL1A1-201ENST00000225964 ATP6V1G3Q96LB4 118 aa13.82□□□□□ -0.2
COL1A1-201ENST00000225964 MARCOQ9UEW3 520 aaPredicted RBP13.82□□□□□ -0.2
COL1A1-201ENST00000225964 LIMA1Q9UHB6 759 aaKnown RBP13.82□□□□□ -0.2
COL1A1-201ENST00000225964 GGT7Q9UJ14 662 aa13.82□□□□□ -0.2
COL1A1-201ENST00000225964 CHMP2BQ9UQN3 213 aa13.82□□□□□ -0.2
COL1A1-201ENST00000225964 ABCA8O94911 1581 aa13.82□□□□□ -0.2
COL1A1-201ENST00000225964 LRRIQ3A6PVS8 624 aaPredicted RBP13.82□□□□□ -0.2
COL1A1-201ENST00000225964 ANKRD65E5RJM6 399 aa13.82□□□□□ -0.2
COL1A1-201ENST00000225964 ZNF185O15231 689 aa13.82□□□□□ -0.2
COL1A1-201ENST00000225964 TRIM16O95361 564 aa13.82□□□□□ -0.2
COL1A1-201ENST00000225964 GLRA4Q5JXX5 417 aa13.82□□□□□ -0.2
COL1A1-201ENST00000225964 TTC39BQ5VTQ0 682 aaPredicted RBP13.82□□□□□ -0.2
COL1A1-201ENST00000225964 SFSWAPQ12872 951 aaKnown RBP13.82□□□□□ -0.2
COL1A1-201ENST00000225964 CCDC142Q17RM4 750 aa13.82□□□□□ -0.2
COL1A1-201ENST00000225964 C1orf131Q8NDD1 294 aaKnown RBP13.82□□□□□ -0.2
COL1A1-201ENST00000225964 WDCPQ9H6R7 721 aa13.82□□□□□ -0.2
COL1A1-201ENST00000225964 QRICH2Q9H0J4 1663 aa13.82□□□□□ -0.2
COL1A1-201ENST00000225964 JCADQ9P266 1359 aa13.81□□□□□ -0.2
COL1A1-201ENST00000225964 CROCC2H7BZ55 1655 aa13.81□□□□□ -0.2
COL1A1-201ENST00000225964 GPR182O15218 404 aa13.81□□□□□ -0.2
COL1A1-201ENST00000225964 RNASEH1O60930 286 aaKnown RBP13.81□□□□□ -0.2
COL1A1-201ENST00000225964 KRT16P08779 473 aa13.81□□□□□ -0.2
COL1A1-201ENST00000225964 SERPINB9P50453 376 aa13.81□□□□□ -0.2
COL1A1-201ENST00000225964 ANGPT1Q15389 498 aa13.81□□□□□ -0.2
COL1A1-201ENST00000225964 MTFR1Q15390 333 aa13.81□□□□□ -0.2
COL1A1-201ENST00000225964 UGT3A1Q6NUS8 523 aa13.81□□□□□ -0.2
COL1A1-201ENST00000225964 DIS3LQ8TF46 1054 aaKnown RBP13.81□□□□□ -0.2
COL1A1-201ENST00000225964 TRIM51Q9BSJ1 452 aa13.81□□□□□ -0.2
COL1A1-201ENST00000225964 FAM167BQ9BTA0 163 aa13.81□□□□□ -0.2
COL1A1-201ENST00000225964 NMRK2Q9NPI5 230 aa13.81□□□□□ -0.2
COL1A1-201ENST00000225964 PNMA8BQ9ULN7 279 aaPredicted RBP13.81□□□□□ -0.2
COL1A1-201ENST00000225964 NEU2Q9Y3R4 380 aa13.81□□□□□ -0.2
COL1A1-201ENST00000225964 V9GYQ6 96 aa13.81□□□□□ -0.2
COL1A1-201ENST00000225964 DCDC2CA8MYV0 355 aa13.81□□□□□ -0.2
COL1A1-201ENST00000225964 ATMINO43313 823 aaPredicted RBP13.81□□□□□ -0.2
COL1A1-201ENST00000225964 POLBP06746 335 aa13.81□□□□□ -0.2
COL1A1-201ENST00000225964 CDC16Q13042 620 aa13.81□□□□□ -0.2
COL1A1-201ENST00000225964 EIF2B5Q13144 721 aaKnown RBP13.81□□□□□ -0.2
COL1A1-201ENST00000225964 PTK6Q13882 451 aa13.81□□□□□ -0.2
COL1A1-201ENST00000225964 IFNEQ86WN2 208 aa13.81□□□□□ -0.2
COL1A1-201ENST00000225964 IPPQ9Y573 584 aa13.81□□□□□ -0.2
COL1A1-201ENST00000225964 FAM47E-STBD1D6RA91 191 aa13.81□□□□□ -0.2
COL1A1-201ENST00000225964 PTK7Q13308 1070 aa13.81□□□□□ -0.2
COL1A1-201ENST00000225964 C16orf89Q6UX73 402 aa13.81□□□□□ -0.2
COL1A1-201ENST00000225964 CATSPER1Q8NEC5 780 aa13.81□□□□□ -0.2
COL1A1-201ENST00000225964 F5H5T6 163 aa13.81□□□□□ -0.2
COL1A1-201ENST00000225964 POU4F1Q01851 419 aa13.81□□□□□ -0.2
COL1A1-201ENST00000225964 PNKPQ96T60 521 aa13.81□□□□□ -0.2
COL1A1-201ENST00000225964 USE1Q9NZ43 259 aa13.81□□□□□ -0.2
COL1A1-201ENST00000225964 ATP11BQ9Y2G3 1177 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms