RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 FRMD5Q7Z6J6 570 aa21.84■■□□□ 1.09
PTCD3-220ENST00000627371 GLYCTKQ8IVS8 523 aa21.84■■□□□ 1.09
PTCD3-220ENST00000627371 CASP10Q92851 521 aa21.84■■□□□ 1.09
PTCD3-220ENST00000627371 METTL14Q9HCE5 456 aaKnown RBP21.84■■□□□ 1.09
PTCD3-220ENST00000627371 THEGQ9P2T0 379 aa21.84■■□□□ 1.09
PTCD3-220ENST00000627371 ARMCX3Q9UH62 379 aaPredicted RBP21.84■■□□□ 1.09
PTCD3-220ENST00000627371 ADAM12O43184 909 aa21.83■■□□□ 1.09
PTCD3-220ENST00000627371 FGFR1OPO95684 399 aaKnown RBP21.83■■□□□ 1.09
PTCD3-220ENST00000627371 STAU1O95793 577 aaKnown RBP21.83■■□□□ 1.09
PTCD3-220ENST00000627371 GLUD1P00367 558 aa21.83■■□□□ 1.09
PTCD3-220ENST00000627371 EPCAMP16422 314 aa21.83■■□□□ 1.09
PTCD3-220ENST00000627371 GTF2H1P32780 548 aa21.83■■□□□ 1.09
PTCD3-220ENST00000627371 GCLMP48507 274 aa21.83■■□□□ 1.09
PTCD3-220ENST00000627371 DLX2Q07687 328 aaPredicted RBP21.83■■□□□ 1.09
PTCD3-220ENST00000627371 CTXN3Q4LDR2 81 aa21.83■■□□□ 1.09
PTCD3-220ENST00000627371 OVOS1Q6IE37 1185 aa21.83■■□□□ 1.09
PTCD3-220ENST00000627371 SLC8B1Q6J4K2 584 aa21.83■■□□□ 1.09
PTCD3-220ENST00000627371 RSPO2Q6UXX9 243 aaPredicted RBP21.83■■□□□ 1.09
PTCD3-220ENST00000627371 EP400NLQ6ZTU2 488 aa21.83■■□□□ 1.09
PTCD3-220ENST00000627371 SRRTQ9BXP5 876 aaKnown RBP21.83■■□□□ 1.09
PTCD3-220ENST00000627371 FBXL5Q9UKA1 691 aa21.83■■□□□ 1.09
PTCD3-220ENST00000627371 BARX2Q9UMQ3 279 aaPredicted RBP21.83■■□□□ 1.09
PTCD3-220ENST00000627371 SNX9Q9Y5X1 595 aa21.83■■□□□ 1.09
PTCD3-220ENST00000627371 CDY1Q9Y6F8 540 aa21.83■■□□□ 1.09
PTCD3-220ENST00000627371 STX10O60499 249 aa21.82■■□□□ 1.08
PTCD3-220ENST00000627371 VNN1O95497 513 aa21.82■■□□□ 1.08
PTCD3-220ENST00000627371 GNA14O95837 355 aa21.82■■□□□ 1.08
PTCD3-220ENST00000627371 KCNA5P22460 613 aa21.82■■□□□ 1.08
PTCD3-220ENST00000627371 ATICP31939 592 aa21.82■■□□□ 1.08
PTCD3-220ENST00000627371 OR1D2P34982 312 aa21.82■■□□□ 1.08
PTCD3-220ENST00000627371 MYL6P60660 151 aa21.82■■□□□ 1.08
PTCD3-220ENST00000627371 NCOA4Q13772 614 aa21.82■■□□□ 1.08
PTCD3-220ENST00000627371 RAB33AQ14088 237 aa21.82■■□□□ 1.08
PTCD3-220ENST00000627371 CCDC40Q4G0X9 1142 aa21.82■■□□□ 1.08
PTCD3-220ENST00000627371 DCAF17Q5H9S7 520 aaPredicted RBP21.82■■□□□ 1.08
PTCD3-220ENST00000627371 OXCT2Q9BYC2 517 aaPredicted RBP21.82■■□□□ 1.08
PTCD3-220ENST00000627371 XYLT2Q9H1B5 865 aa21.82■■□□□ 1.08
PTCD3-220ENST00000627371 VRTNQ9H8Y1 702 aa21.82■■□□□ 1.08
PTCD3-220ENST00000627371 TMEM8AQ9HCN3 771 aa21.82■■□□□ 1.08
PTCD3-220ENST00000627371 CLEC1BQ9P126 229 aa21.82■■□□□ 1.08
PTCD3-220ENST00000627371 TGM5O43548 720 aa21.81■■□□□ 1.08
PTCD3-220ENST00000627371 HUS1O60921 280 aa21.81■■□□□ 1.08
PTCD3-220ENST00000627371 MARSP56192 900 aaKnown RBP21.81■■□□□ 1.08
PTCD3-220ENST00000627371 STX1AQ16623 288 aa21.81■■□□□ 1.08
PTCD3-220ENST00000627371 TCERG1LQ5VWI1 586 aa21.81■■□□□ 1.08
PTCD3-220ENST00000627371 WSCD1Q658N2 575 aa21.81■■□□□ 1.08
PTCD3-220ENST00000627371 METTL23Q86XA0 190 aa21.81■■□□□ 1.08
PTCD3-220ENST00000627371 PALB2Q86YC2 1186 aa21.81■■□□□ 1.08
PTCD3-220ENST00000627371 TOP6BLQ8N6T0 577 aa21.81■■□□□ 1.08
PTCD3-220ENST00000627371 SLC35C1Q96A29 364 aa21.81■■□□□ 1.08
PTCD3-220ENST00000627371 MSLNLQ96KJ4 702 aa21.81■■□□□ 1.08
PTCD3-220ENST00000627371 MMRN2Q9H8L6 949 aa21.81■■□□□ 1.08
PTCD3-220ENST00000627371 DZANK1Q9NVP4 752 aa21.81■■□□□ 1.08
PTCD3-220ENST00000627371 ANO10Q9NW15 660 aa21.81■■□□□ 1.08
PTCD3-220ENST00000627371 L1RE1Q9UN81 338 aa21.81■■□□□ 1.08
PTCD3-220ENST00000627371 C2orf16Q68DN1 1984 aa21.8■■□□□ 1.08
PTCD3-220ENST00000627371 PIK3CAP42336 1068 aa21.8■■□□□ 1.08
PTCD3-220ENST00000627371 MXI1P50539 228 aa21.8■■□□□ 1.08
PTCD3-220ENST00000627371 ROR1Q01973 937 aa21.8■■□□□ 1.08
PTCD3-220ENST00000627371 ZNF699Q32M78 642 aa21.8■■□□□ 1.08
PTCD3-220ENST00000627371 KRT39Q6A163 491 aa21.8■■□□□ 1.08
PTCD3-220ENST00000627371 ANKRD54Q6NXT1 300 aa21.8■■□□□ 1.08
PTCD3-220ENST00000627371 LILRA6Q6PI73 481 aa21.8■■□□□ 1.08
PTCD3-220ENST00000627371 DPH6Q7L8W6 267 aa21.8■■□□□ 1.08
PTCD3-220ENST00000627371 TMEM86AQ8N2M4 240 aa21.8■■□□□ 1.08
PTCD3-220ENST00000627371 PDCL2Q8N4E4 241 aa21.8■■□□□ 1.08
PTCD3-220ENST00000627371 SPATA18Q8TC71 538 aa21.8■■□□□ 1.08
PTCD3-220ENST00000627371 OR6C75A6NL08 312 aa21.79■■□□□ 1.08
PTCD3-220ENST00000627371 H3BQ06 376 aaPredicted RBP21.79■■□□□ 1.08
PTCD3-220ENST00000627371 HLA-DRAP01903 254 aa21.79■■□□□ 1.08
PTCD3-220ENST00000627371 CCDC192P0DO97 292 aa21.79■■□□□ 1.08
PTCD3-220ENST00000627371 TFF2Q03403 129 aa21.79■■□□□ 1.08
PTCD3-220ENST00000627371 SOWAHAQ2M3V2 549 aa21.79■■□□□ 1.08
PTCD3-220ENST00000627371 WDR72Q3MJ13 1102 aa21.79■■□□□ 1.08
PTCD3-220ENST00000627371 LEXMQ3ZCV2 418 aa21.79■■□□□ 1.08
PTCD3-220ENST00000627371 LIMS2Q7Z4I7 341 aa21.79■■□□□ 1.08
PTCD3-220ENST00000627371 TAS1R2Q8TE23 839 aa21.79■■□□□ 1.08
PTCD3-220ENST00000627371 HDAC7Q8WUI4 952 aa21.79■■□□□ 1.08
PTCD3-220ENST00000627371 TAF4BQ92750 862 aa21.79■■□□□ 1.08
PTCD3-220ENST00000627371 MAN1C1Q9NR34 630 aa21.79■■□□□ 1.08
PTCD3-220ENST00000627371 DPP7Q9UHL4 492 aa21.79■■□□□ 1.08
PTCD3-220ENST00000627371 FBXW11Q9UKB1 542 aa21.79■■□□□ 1.08
PTCD3-220ENST00000627371 WDR27A2RRH5 827 aa21.78■■□□□ 1.08
PTCD3-220ENST00000627371 ASS1P00966 412 aaKnown RBP21.78■■□□□ 1.08
PTCD3-220ENST00000627371 HOXB8P17481 243 aaPredicted RBP21.78■■□□□ 1.08
PTCD3-220ENST00000627371 TNNC1P63316 161 aa21.78■■□□□ 1.08
PTCD3-220ENST00000627371 TPD52L1Q16890 204 aaPredicted RBP21.78■■□□□ 1.08
PTCD3-220ENST00000627371 SGSM1Q2NKQ1 1148 aa21.78■■□□□ 1.08
PTCD3-220ENST00000627371 SKOR2Q2VWA4 1001 aaPredicted RBP21.78■■□□□ 1.08
PTCD3-220ENST00000627371 ELMSAN1Q6PJG2 1045 aa21.78■■□□□ 1.08
PTCD3-220ENST00000627371 TRIM59Q8IWR1 403 aa21.78■■□□□ 1.08
PTCD3-220ENST00000627371 ADGRF2Q8IZF7 708 aa21.78■■□□□ 1.08
PTCD3-220ENST00000627371 THEM5Q8N1Q8 247 aa21.78■■□□□ 1.08
PTCD3-220ENST00000627371 ATXN2LQ8WWM7 1075 aaKnown RBP21.78■■□□□ 1.08
PTCD3-220ENST00000627371 CNOT6LQ96LI5 555 aaKnown RBP21.78■■□□□ 1.08
PTCD3-220ENST00000627371 RTP3Q9BQQ7 232 aa21.78■■□□□ 1.08
PTCD3-220ENST00000627371 PLEKHA4Q9H4M7 779 aa21.78■■□□□ 1.08
PTCD3-220ENST00000627371 CD207Q9UJ71 328 aa21.78■■□□□ 1.08
PTCD3-220ENST00000627371 ABLIM3O94929 683 aa21.77■■□□□ 1.08
PTCD3-220ENST00000627371 ARPP19P56211 112 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms