RNA–Protein interactions for RNA: ENST00000620511.1

TRIO-224, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2 BASIC

Gene TRIO, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-224ENST00000620511 HERC2P3Q9BVR0 1158 aa10.33□□□□□ -0.76
TRIO-224ENST00000620511 SPTLC3Q9NUV7 552 aa10.33□□□□□ -0.76
TRIO-224ENST00000620511 GDAP2Q9NXN4 497 aa10.33□□□□□ -0.76
TRIO-224ENST00000620511 IMPACTQ9P2X3 320 aa10.33□□□□□ -0.76
TRIO-224ENST00000620511 NME7Q9Y5B8 376 aa10.33□□□□□ -0.76
TRIO-224ENST00000620511 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.33□□□□□ -0.76
TRIO-224ENST00000620511 IRAK3Q9Y616 596 aa10.33□□□□□ -0.76
TRIO-224ENST00000620511 PLXNA3P51805 1871 aa10.32□□□□□ -0.76
TRIO-224ENST00000620511 SF3B1O75533 1304 aaKnown RBP eCLIP10.32□□□□□ -0.76
TRIO-224ENST00000620511 UNC80Q8N2C7 3258 aa10.32□□□□□ -0.76
TRIO-224ENST00000620511 ADAM12O43184 909 aa10.32□□□□□ -0.76
TRIO-224ENST00000620511 CBFA2T2O43439 604 aa10.32□□□□□ -0.76
TRIO-224ENST00000620511 CYP11A1P05108 521 aa10.32□□□□□ -0.76
TRIO-224ENST00000620511 EEF1GP26641 437 aaKnown RBP10.32□□□□□ -0.76
TRIO-224ENST00000620511 TAF6P49848 677 aa10.32□□□□□ -0.76
TRIO-224ENST00000620511 GSDMDP57764 484 aa10.32□□□□□ -0.76
TRIO-224ENST00000620511 DSG1Q02413 1049 aa10.32□□□□□ -0.76
TRIO-224ENST00000620511 PTPN14Q15678 1187 aa10.32□□□□□ -0.76
TRIO-224ENST00000620511 SOWAHAQ2M3V2 549 aa10.32□□□□□ -0.76
TRIO-224ENST00000620511 CCDC186Q7Z3E2 898 aa10.32□□□□□ -0.76
TRIO-224ENST00000620511 ADGRD2Q7Z7M1 963 aa10.32□□□□□ -0.76
TRIO-224ENST00000620511 USP37Q86T82 979 aa10.32□□□□□ -0.76
TRIO-224ENST00000620511 DEFB123Q8N688 67 aa10.32□□□□□ -0.76
TRIO-224ENST00000620511 MRPL43Q8N983 215 aaKnown RBP10.32□□□□□ -0.76
TRIO-224ENST00000620511 LNX1Q8TBB1 728 aaPredicted RBP10.32□□□□□ -0.76
TRIO-224ENST00000620511 MRPL38Q96DV4 380 aaKnown RBP10.32□□□□□ -0.76
TRIO-224ENST00000620511 RTP3Q9BQQ7 232 aa10.32□□□□□ -0.76
TRIO-224ENST00000620511 TLR9Q9NR96 1032 aa10.32□□□□□ -0.76
TRIO-224ENST00000620511 LIMA1Q9UHB6 759 aaKnown RBP10.32□□□□□ -0.76
TRIO-224ENST00000620511 PCDHB8Q9UN66 801 aa10.32□□□□□ -0.76
TRIO-224ENST00000620511 L1RE1Q9UN81 338 aa10.32□□□□□ -0.76
TRIO-224ENST00000620511 POLIQ9UNA4 740 aa10.32□□□□□ -0.76
TRIO-224ENST00000620511 NUB1Q9Y5A7 615 aa10.32□□□□□ -0.76
TRIO-224ENST00000620511 TIMM13Q9Y5L4 95 aaPredicted RBP10.32□□□□□ -0.76
TRIO-224ENST00000620511 MTCH2Q9Y6C9 303 aa10.32□□□□□ -0.76
TRIO-224ENST00000620511 MTCL1Q9Y4B5 1905 aaKnown RBP10.32□□□□□ -0.76
TRIO-224ENST00000620511 C2orf71A6NGG8 1288 aa10.31□□□□□ -0.76
TRIO-224ENST00000620511 OAZ2O95190 189 aa10.31□□□□□ -0.76
TRIO-224ENST00000620511 AFPP02771 609 aaKnown RBP10.31□□□□□ -0.76
TRIO-224ENST00000620511 ATICP31939 592 aa10.31□□□□□ -0.76
TRIO-224ENST00000620511 PNPLA4P41247 253 aa10.31□□□□□ -0.76
TRIO-224ENST00000620511 MTIF2P46199 727 aaKnown RBP10.31□□□□□ -0.76
TRIO-224ENST00000620511 BIRC3Q13489 604 aa10.31□□□□□ -0.76
TRIO-224ENST00000620511 MAN2A1Q16706 1144 aa10.31□□□□□ -0.76
TRIO-224ENST00000620511 USP41Q3LFD5 358 aa10.31□□□□□ -0.76
TRIO-224ENST00000620511 SV2CQ496J9 727 aa10.31□□□□□ -0.76
TRIO-224ENST00000620511 VWA3BQ502W6 1294 aa10.31□□□□□ -0.76
TRIO-224ENST00000620511 WSCD1Q658N2 575 aa10.31□□□□□ -0.76
TRIO-224ENST00000620511 PRSS55Q6UWB4 352 aaPredicted RBP10.31□□□□□ -0.76
TRIO-224ENST00000620511 CREBRFQ8IUR6 639 aa10.31□□□□□ -0.76
TRIO-224ENST00000620511 FAM114A1Q8IWE2 563 aa10.31□□□□□ -0.76
TRIO-224ENST00000620511 PDCL2Q8N4E4 241 aa10.31□□□□□ -0.76
TRIO-224ENST00000620511 FBXL13Q8NEE6 735 aa10.31□□□□□ -0.76
TRIO-224ENST00000620511 KIAA1524Q8TCG1 905 aa10.31□□□□□ -0.76
TRIO-224ENST00000620511 KBTBD7Q8WVZ9 684 aa10.31□□□□□ -0.76
TRIO-224ENST00000620511 PIK3R5Q8WYR1 880 aa10.31□□□□□ -0.76
TRIO-224ENST00000620511 TATDN2Q93075 761 aa10.31□□□□□ -0.76
TRIO-224ENST00000620511 ZNF830Q96NB3 372 aaPredicted RBP10.31□□□□□ -0.76
TRIO-224ENST00000620511 TCF25Q9BQ70 676 aa10.31□□□□□ -0.76
TRIO-224ENST00000620511 CLSTN3Q9BQT9 956 aa10.31□□□□□ -0.76
TRIO-224ENST00000620511 TTPALQ9BTX7 342 aa10.31□□□□□ -0.76
TRIO-224ENST00000620511 LMAN2LQ9H0V9 348 aa10.31□□□□□ -0.76
TRIO-224ENST00000620511 SDCBP2Q9H190 292 aa10.31□□□□□ -0.76
TRIO-224ENST00000620511 NDST4Q9H3R1 872 aa10.31□□□□□ -0.76
TRIO-224ENST00000620511 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.31□□□□□ -0.76
TRIO-224ENST00000620511 RAB20Q9NX57 234 aa10.31□□□□□ -0.76
TRIO-224ENST00000620511 TAB2Q9NYJ8 693 aa10.31□□□□□ -0.76
TRIO-224ENST00000620511 PUF60Q9UHX1 559 aaKnown RBP10.31□□□□□ -0.76
TRIO-224ENST00000620511 SNX9Q9Y5X1 595 aa10.31□□□□□ -0.76
TRIO-224ENST00000620511 DOCK6Q96HP0 2047 aa10.3□□□□□ -0.76
TRIO-224ENST00000620511 C2CD2LO14523 706 aa10.3□□□□□ -0.76
TRIO-224ENST00000620511 CYB561D2O14569 222 aa10.3□□□□□ -0.76
TRIO-224ENST00000620511 GABRDO14764 452 aa10.3□□□□□ -0.76
TRIO-224ENST00000620511 SYN3O14994 580 aa10.3□□□□□ -0.76
TRIO-224ENST00000620511 P4HA2O15460 535 aa10.3□□□□□ -0.76
TRIO-224ENST00000620511 HCRTO43612 131 aa10.3□□□□□ -0.76
TRIO-224ENST00000620511 TRAPPC3O43617 180 aa10.3□□□□□ -0.76
TRIO-224ENST00000620511 STX10O60499 249 aa10.3□□□□□ -0.76
TRIO-224ENST00000620511 PHACTR2O75167 634 aa10.3□□□□□ -0.76
TRIO-224ENST00000620511 CSPG5O95196 566 aa10.3□□□□□ -0.76
TRIO-224ENST00000620511 CXCL14O95715 111 aa10.3□□□□□ -0.76
TRIO-224ENST00000620511 CNPP09543 421 aaKnown RBP10.3□□□□□ -0.76
TRIO-224ENST00000620511 TYMPP19971 482 aa10.3□□□□□ -0.76
TRIO-224ENST00000620511 PAX3P23760 479 aa10.3□□□□□ -0.76
TRIO-224ENST00000620511 PIK3CAP42336 1068 aa10.3□□□□□ -0.76
TRIO-224ENST00000620511 ASPAP45381 313 aa10.3□□□□□ -0.76
TRIO-224ENST00000620511 GLUD2P49448 558 aa10.3□□□□□ -0.76
TRIO-224ENST00000620511 CDH8P55286 799 aa10.3□□□□□ -0.76
TRIO-224ENST00000620511 MYL7Q01449 175 aa10.3□□□□□ -0.76
TRIO-224ENST00000620511 APBA1Q02410 837 aa10.3□□□□□ -0.76
TRIO-224ENST00000620511 KCNMA1Q12791 1236 aa10.3□□□□□ -0.76
TRIO-224ENST00000620511 ELAVL2Q12926 359 aaKnown RBP10.3□□□□□ -0.76
TRIO-224ENST00000620511 TRPC3Q13507 836 aa10.3□□□□□ -0.76
TRIO-224ENST00000620511 SGSM1Q2NKQ1 1148 aa10.3□□□□□ -0.76
TRIO-224ENST00000620511 WDR72Q3MJ13 1102 aa10.3□□□□□ -0.76
TRIO-224ENST00000620511 VARS2Q5ST30 1063 aaKnown RBP10.3□□□□□ -0.76
TRIO-224ENST00000620511 PLPP4Q5VZY2 271 aa10.3□□□□□ -0.76
TRIO-224ENST00000620511 TMC7Q7Z402 723 aa10.3□□□□□ -0.76
TRIO-224ENST00000620511 OSTM1Q86WC4 334 aa10.3□□□□□ -0.76
TRIO-224ENST00000620511 GPR65Q8IYL9 337 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms