RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 TBC1D10AQ9BXI6 508 aa15.37■□□□□ 0.05
VPS36-207ENST00000611132 ADA2Q9NZK5 511 aa15.37■□□□□ 0.05
VPS36-207ENST00000611132 GABBR1Q9UBS5 961 aa15.37■□□□□ 0.05
VPS36-207ENST00000611132 APRTP07741 180 aa15.37■□□□□ 0.05
VPS36-207ENST00000611132 SKIV2L2P42285 1042 aaKnown RBP15.37■□□□□ 0.05
VPS36-207ENST00000611132 COG2Q14746 738 aa15.37■□□□□ 0.05
VPS36-207ENST00000611132 C1orf228Q6PIY5 440 aa15.37■□□□□ 0.05
VPS36-207ENST00000611132 POTEAQ6S8J7 498 aa15.37■□□□□ 0.05
VPS36-207ENST00000611132 LNX1Q8TBB1 728 aaPredicted RBP15.37■□□□□ 0.05
VPS36-207ENST00000611132 HDAC11Q96DB2 347 aa15.37■□□□□ 0.05
VPS36-207ENST00000611132 CBWD1Q9BRT8 395 aa15.37■□□□□ 0.05
VPS36-207ENST00000611132 SLC12A6Q9UHW9 1150 aa15.37■□□□□ 0.05
VPS36-207ENST00000611132 C2CD2Q9Y426 696 aa15.37■□□□□ 0.05
VPS36-207ENST00000611132 PRPSAP1Q14558 356 aa15.36■□□□□ 0.05
VPS36-207ENST00000611132 THNSL1Q8IYQ7 743 aa15.36■□□□□ 0.05
VPS36-207ENST00000611132 NDUFAF2Q8N183 169 aa15.36■□□□□ 0.05
VPS36-207ENST00000611132 LRRC43Q8N309 656 aa15.36■□□□□ 0.05
VPS36-207ENST00000611132 NRBF2Q96F24 287 aa15.36■□□□□ 0.05
VPS36-207ENST00000611132 PAFAH2Q99487 392 aa15.36■□□□□ 0.05
VPS36-207ENST00000611132 NCANO14594 1321 aa15.36■□□□□ 0.05
VPS36-207ENST00000611132 AP1G2O75843 785 aa15.36■□□□□ 0.05
VPS36-207ENST00000611132 PROSCO94903 275 aa15.36■□□□□ 0.05
VPS36-207ENST00000611132 PAEPP09466 180 aa15.36■□□□□ 0.05
VPS36-207ENST00000611132 C2CD6Q53TS8 623 aa15.36■□□□□ 0.05
VPS36-207ENST00000611132 THEMIS2Q5TEJ8 643 aa15.36■□□□□ 0.05
VPS36-207ENST00000611132 TTC39BQ5VTQ0 682 aaPredicted RBP15.36■□□□□ 0.05
VPS36-207ENST00000611132 TM9SF1O15321 606 aa15.36■□□□□ 0.05
VPS36-207ENST00000611132 HLA-DRAP01903 254 aa15.36■□□□□ 0.05
VPS36-207ENST00000611132 PTDSS1P48651 473 aaKnown RBP15.36■□□□□ 0.05
VPS36-207ENST00000611132 MYBPC2Q14324 1141 aa15.36■□□□□ 0.05
VPS36-207ENST00000611132 LMTK3Q96Q04 1460 aa15.36■□□□□ 0.05
VPS36-207ENST00000611132 SERPINB9P50453 376 aa15.36■□□□□ 0.05
VPS36-207ENST00000611132 CASP5P51878 434 aa15.36■□□□□ 0.05
VPS36-207ENST00000611132 SLC45A4Q5BKX6 768 aa15.36■□□□□ 0.05
VPS36-207ENST00000611132 TEDDM1Q5T9Z0 273 aa15.36■□□□□ 0.05
VPS36-207ENST00000611132 CCDC138Q96M89 665 aa15.36■□□□□ 0.05
VPS36-207ENST00000611132 RIT2Q99578 217 aa15.36■□□□□ 0.05
VPS36-207ENST00000611132 KIAA1683Q9H0B3 1180 aa15.36■□□□□ 0.05
VPS36-207ENST00000611132 TAS2R14Q9NYV8 317 aa15.36■□□□□ 0.05
VPS36-207ENST00000611132 PRR12Q9ULL5 1215 aa15.36■□□□□ 0.05
VPS36-207ENST00000611132 ACTL7BQ9Y614 415 aa15.36■□□□□ 0.05
VPS36-207ENST00000611132 LOC100653049A0A140TA62 436 aa15.35■□□□□ 0.05
VPS36-207ENST00000611132 KRT34O76011 436 aa15.35■□□□□ 0.05
VPS36-207ENST00000611132 NOL4O94818 638 aa15.35■□□□□ 0.05
VPS36-207ENST00000611132 ATP6V1C1P21283 382 aa15.35■□□□□ 0.05
VPS36-207ENST00000611132 SREBF1P36956 1147 aa15.35■□□□□ 0.05
VPS36-207ENST00000611132 PTK6Q13882 451 aa15.35■□□□□ 0.05
VPS36-207ENST00000611132 PKN2Q16513 984 aaKnown RBP15.35■□□□□ 0.05
VPS36-207ENST00000611132 LDHDQ86WU2 507 aa15.35■□□□□ 0.05
VPS36-207ENST00000611132 EXD1Q8NHP7 514 aa15.35■□□□□ 0.05
VPS36-207ENST00000611132 ZNF75CPQ92670 426 aaPredicted RBP15.35■□□□□ 0.05
VPS36-207ENST00000611132 ART4Q93070 314 aa15.35■□□□□ 0.05
VPS36-207ENST00000611132 COPAP53621 1224 aa15.35■□□□□ 0.05
VPS36-207ENST00000611132 ROR2Q01974 943 aaKnown RBP15.35■□□□□ 0.05
VPS36-207ENST00000611132 NFIXQ14938 502 aa15.35■□□□□ 0.05
VPS36-207ENST00000611132 TMCO4Q5TGY1 634 aa15.35■□□□□ 0.05
VPS36-207ENST00000611132 TXNRD3Q86VQ6 643 aa15.35■□□□□ 0.05
VPS36-207ENST00000611132 LRRC6Q86X45 466 aa15.35■□□□□ 0.05
VPS36-207ENST00000611132 FBXO36Q8NEA4 188 aa15.35■□□□□ 0.05
VPS36-207ENST00000611132 B4GALNT2Q8NHY0 566 aa15.35■□□□□ 0.05
VPS36-207ENST00000611132 ARHGEF1Q92888 912 aaKnown RBP15.35■□□□□ 0.05
VPS36-207ENST00000611132 TLCD1Q96CP7 247 aa15.35■□□□□ 0.05
VPS36-207ENST00000611132 POLR3FQ9H1D9 316 aaPredicted RBP15.35■□□□□ 0.05
VPS36-207ENST00000611132 CCDC68Q9H2F9 335 aa15.35■□□□□ 0.05
VPS36-207ENST00000611132 TDRD3Q9H7E2 651 aaKnown RBP15.35■□□□□ 0.05
VPS36-207ENST00000611132 CHST7Q9NS84 486 aa15.35■□□□□ 0.05
VPS36-207ENST00000611132 FEM1BQ9UK73 627 aa15.35■□□□□ 0.05
VPS36-207ENST00000611132 A8MXQ7 604 aa15.35■□□□□ 0.05
VPS36-207ENST00000611132 LIN7AO14910 233 aaPredicted RBP15.35■□□□□ 0.05
VPS36-207ENST00000611132 KCNN4O15554 427 aa15.35■□□□□ 0.05
VPS36-207ENST00000611132 FKBP6O75344 327 aa15.35■□□□□ 0.05
VPS36-207ENST00000611132 SLC12A3P55017 1021 aa15.35■□□□□ 0.05
VPS36-207ENST00000611132 FAM102AQ5T9C2 384 aaPredicted RBP15.35■□□□□ 0.05
VPS36-207ENST00000611132 C16orf87Q6PH81 154 aa15.35■□□□□ 0.05
VPS36-207ENST00000611132 CBWD2Q8IUF1 395 aa15.35■□□□□ 0.05
VPS36-207ENST00000611132 CDKL3Q8IVW4 592 aaPredicted RBP15.35■□□□□ 0.05
VPS36-207ENST00000611132 C7orf31Q8N865 590 aa15.35■□□□□ 0.05
VPS36-207ENST00000611132 MCUQ8NE86 351 aa15.35■□□□□ 0.05
VPS36-207ENST00000611132 C5orf60A6NFR6 353 aa15.34■□□□□ 0.05
VPS36-207ENST00000611132 SRGAP2CP0DJJ0 459 aa15.34■□□□□ 0.05
VPS36-207ENST00000611132 ACOT2P49753 483 aa15.34■□□□□ 0.05
VPS36-207ENST00000611132 MARSP56192 900 aaKnown RBP15.34■□□□□ 0.05
VPS36-207ENST00000611132 ITPK1Q13572 414 aa15.34■□□□□ 0.05
VPS36-207ENST00000611132 TNFAIP1Q13829 316 aa15.34■□□□□ 0.05
VPS36-207ENST00000611132 HEATR6Q6AI08 1181 aaKnown RBP15.34■□□□□ 0.05
VPS36-207ENST00000611132 RSBN1LQ6PCB5 846 aaPredicted RBP15.34■□□□□ 0.05
VPS36-207ENST00000611132 ARHGAP22Q7Z5H3 698 aa15.34■□□□□ 0.05
VPS36-207ENST00000611132 TMPRSS6Q8IU80 811 aa15.34■□□□□ 0.05
VPS36-207ENST00000611132 DCLK2Q8N568 766 aa15.34■□□□□ 0.05
VPS36-207ENST00000611132 NKX2-3Q8TAU0 364 aa15.34■□□□□ 0.05
VPS36-207ENST00000611132 SPATA18Q8TC71 538 aa15.34■□□□□ 0.05
VPS36-207ENST00000611132 RPF1Q9H9Y2 349 aaKnown RBP15.34■□□□□ 0.05
VPS36-207ENST00000611132 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.34■□□□□ 0.05
VPS36-207ENST00000611132 AP1B1Q10567 949 aa15.34■□□□□ 0.05
VPS36-207ENST00000611132 CBWD6Q4V339 395 aa15.34■□□□□ 0.05
VPS36-207ENST00000611132 CBWD3Q5JTY5 395 aa15.34■□□□□ 0.05
VPS36-207ENST00000611132 CBWD5Q5RIA9 395 aa15.34■□□□□ 0.05
VPS36-207ENST00000611132 INTS5Q6P9B9 1019 aaKnown RBP15.34■□□□□ 0.05
VPS36-207ENST00000611132 CXorf38Q8TB03 319 aa15.34■□□□□ 0.05
VPS36-207ENST00000611132 AGR3Q8TD06 166 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms