RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 COLEC11Q9BWP8 271 aa19.87■□□□□ 0.77
SSBP4-212ENST00000601919 DEF6Q9H4E7 631 aa19.87■□□□□ 0.77
SSBP4-212ENST00000601919 CYB561D2O14569 222 aa19.86■□□□□ 0.77
SSBP4-212ENST00000601919 TRAPPC3O43617 180 aa19.86■□□□□ 0.77
SSBP4-212ENST00000601919 TACC1O75410 805 aa19.86■□□□□ 0.77
SSBP4-212ENST00000601919 ALDH2P05091 517 aa19.86■□□□□ 0.77
SSBP4-212ENST00000601919 CD58P19256 250 aa19.86■□□□□ 0.77
SSBP4-212ENST00000601919 ACO1P21399 889 aaKnown RBP19.86■□□□□ 0.77
SSBP4-212ENST00000601919 CYLC1P35663 651 aaPredicted RBP19.86■□□□□ 0.77
SSBP4-212ENST00000601919 OR1G1P47890 313 aa19.86■□□□□ 0.77
SSBP4-212ENST00000601919 GATMP50440 423 aa19.86■□□□□ 0.77
SSBP4-212ENST00000601919 PDE6CP51160 858 aa19.86■□□□□ 0.77
SSBP4-212ENST00000601919 DEFB103AP81534 67 aa19.86■□□□□ 0.77
SSBP4-212ENST00000601919 TMEM139Q8IV31 216 aa19.86■□□□□ 0.77
SSBP4-212ENST00000601919 CMTR2Q8IYT2 770 aaKnown RBP19.86■□□□□ 0.77
SSBP4-212ENST00000601919 UBR7Q8N806 425 aa19.86■□□□□ 0.77
SSBP4-212ENST00000601919 RBBP8NLQ8NC74 664 aaPredicted RBP19.86■□□□□ 0.77
SSBP4-212ENST00000601919 SPATA18Q8TC71 538 aa19.86■□□□□ 0.77
SSBP4-212ENST00000601919 SLC9A7Q96T83 725 aa19.86■□□□□ 0.77
SSBP4-212ENST00000601919 KCNF1Q9H3M0 494 aa19.86■□□□□ 0.77
SSBP4-212ENST00000601919 SMYD3Q9H7B4 428 aa19.86■□□□□ 0.77
SSBP4-212ENST00000601919 NRDE2Q9H7Z3 1164 aa19.86■□□□□ 0.77
SSBP4-212ENST00000601919 DSEQ9UL01 958 aa19.86■□□□□ 0.77
SSBP4-212ENST00000601919 BARX2Q9UMQ3 279 aaPredicted RBP19.86■□□□□ 0.77
SSBP4-212ENST00000601919 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.86■□□□□ 0.77
SSBP4-212ENST00000601919 SPTLC1O15269 473 aa19.85■□□□□ 0.77
SSBP4-212ENST00000601919 CYP26A1O43174 497 aa19.85■□□□□ 0.77
SSBP4-212ENST00000601919 IPO7O95373 1038 aaKnown RBP19.85■□□□□ 0.77
SSBP4-212ENST00000601919 PNMA6AP0CW24 399 aaPredicted RBP19.85■□□□□ 0.77
SSBP4-212ENST00000601919 ODC1P11926 461 aa19.85■□□□□ 0.77
SSBP4-212ENST00000601919 AARSP49588 968 aaKnown RBP eCLIP19.85■□□□□ 0.77
SSBP4-212ENST00000601919 INCA1Q0VD86 236 aa19.85■□□□□ 0.77
SSBP4-212ENST00000601919 MAPK8IP2Q13387 824 aaPredicted RBP19.85■□□□□ 0.77
SSBP4-212ENST00000601919 PAN2Q504Q3 1202 aaKnown RBP19.85■□□□□ 0.77
SSBP4-212ENST00000601919 E4F1Q66K89 784 aaPredicted RBP19.85■□□□□ 0.77
SSBP4-212ENST00000601919 TMEM86AQ8N2M4 240 aa19.85■□□□□ 0.77
SSBP4-212ENST00000601919 PHOSPHO2Q8TCD6 241 aa19.85■□□□□ 0.77
SSBP4-212ENST00000601919 SENP8Q96LD8 212 aa19.85■□□□□ 0.77
SSBP4-212ENST00000601919 YME1L1Q96TA2 773 aa19.85■□□□□ 0.77
SSBP4-212ENST00000601919 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.85■□□□□ 0.774e-8■□□□□ 9.4
SSBP4-212ENST00000601919 SNX25Q9H3E2 840 aa19.85■□□□□ 0.77
SSBP4-212ENST00000601919 HAUS4Q9H6D7 363 aa19.85■□□□□ 0.77
SSBP4-212ENST00000601919 NHEJ1Q9H9Q4 299 aaPredicted RBP19.85■□□□□ 0.77
SSBP4-212ENST00000601919 FAN1Q9Y2M0 1017 aa19.85■□□□□ 0.77
SSBP4-212ENST00000601919 SLC4A7Q9Y6M7 1214 aa19.85■□□□□ 0.77
SSBP4-212ENST00000601919 AKR1B10O60218 316 aa19.84■□□□□ 0.77
SSBP4-212ENST00000601919 PAEPP09466 180 aa19.84■□□□□ 0.77
SSBP4-212ENST00000601919 CLCN1P35523 988 aa19.84■□□□□ 0.77
SSBP4-212ENST00000601919 RAP1GAPP47736 663 aa19.84■□□□□ 0.77
SSBP4-212ENST00000601919 CDH8P55286 799 aa19.84■□□□□ 0.77
SSBP4-212ENST00000601919 SOWAHAQ2M3V2 549 aa19.84■□□□□ 0.77
SSBP4-212ENST00000601919 HGSNATQ68CP4 663 aa19.84■□□□□ 0.77
SSBP4-212ENST00000601919 LIMS2Q7Z4I7 341 aa19.84■□□□□ 0.77
SSBP4-212ENST00000601919 UNC93AQ86WB7 457 aa19.84■□□□□ 0.77
SSBP4-212ENST00000601919 METTL23Q86XA0 190 aa19.84■□□□□ 0.77
SSBP4-212ENST00000601919 ZNF689Q96CS4 500 aaPredicted RBP19.84■□□□□ 0.77
SSBP4-212ENST00000601919 CHP1Q99653 195 aa19.84■□□□□ 0.77
SSBP4-212ENST00000601919 PAAF1Q9BRP4 392 aa19.84■□□□□ 0.77
SSBP4-212ENST00000601919 ARHGAP20Q9P2F6 1191 aa19.84■□□□□ 0.77
SSBP4-212ENST00000601919 CACNG4Q9UBN1 327 aa19.84■□□□□ 0.77
SSBP4-212ENST00000601919 CILPO75339 1184 aa19.83■□□□□ 0.77
SSBP4-212ENST00000601919 TADA2AO75478 443 aa19.83■□□□□ 0.77
SSBP4-212ENST00000601919 KIF4AO95239 1232 aa19.83■□□□□ 0.77
SSBP4-212ENST00000601919 CYP11B1P15538 503 aa19.83■□□□□ 0.77
SSBP4-212ENST00000601919 EIF4A3P38919 411 aaKnown RBP19.83■□□□□ 0.77
SSBP4-212ENST00000601919 ALDH7A1P49419 539 aaKnown RBP19.83■□□□□ 0.77
SSBP4-212ENST00000601919 ZNF132P52740 706 aa19.83■□□□□ 0.77
SSBP4-212ENST00000601919 EPHB4P54760 987 aa19.83■□□□□ 0.77
SSBP4-212ENST00000601919 ELAVL2Q12926 359 aaKnown RBP19.83■□□□□ 0.77
SSBP4-212ENST00000601919 BTG3Q14201 252 aaPredicted RBP19.83■□□□□ 0.77
SSBP4-212ENST00000601919 FAM117BQ6P1L5 589 aa19.83■□□□□ 0.77
SSBP4-212ENST00000601919 ZNF677Q86XU0 584 aa19.83■□□□□ 0.77
SSBP4-212ENST00000601919 ADGRF2Q8IZF7 708 aa19.83■□□□□ 0.77
SSBP4-212ENST00000601919 C3orf58Q8NDZ4 430 aa19.83■□□□□ 0.77
SSBP4-212ENST00000601919 OR6B3Q8NGW1 331 aa19.83■□□□□ 0.77
SSBP4-212ENST00000601919 SUSD3Q96L08 255 aa19.83■□□□□ 0.77
SSBP4-212ENST00000601919 ZBED2Q9BTP6 218 aa19.83■□□□□ 0.77
SSBP4-212ENST00000601919 NT5C1AQ9BXI3 368 aa19.83■□□□□ 0.77
SSBP4-212ENST00000601919 SDCBP2Q9H190 292 aa19.83■□□□□ 0.77
SSBP4-212ENST00000601919 DNAJB4Q9UDY4 337 aa19.83■□□□□ 0.77
SSBP4-212ENST00000601919 KIAA1257Q9ULG3 409 aa19.83■□□□□ 0.77
SSBP4-212ENST00000601919 PTPRSQ13332 1948 aa19.82■□□□□ 0.76
SSBP4-212ENST00000601919 SOWAHDA6NJG2 315 aa19.82■□□□□ 0.76
SSBP4-212ENST00000601919 M0QZQ0 153 aa19.82■□□□□ 0.76
SSBP4-212ENST00000601919 NRP1O14786 923 aa19.82■□□□□ 0.76
SSBP4-212ENST00000601919 GJB5O95377 273 aa19.82■□□□□ 0.76
SSBP4-212ENST00000601919 TNFAIP3P21580 790 aa19.82■□□□□ 0.76
SSBP4-212ENST00000601919 WARSP23381 471 aaKnown RBP19.82■□□□□ 0.76
SSBP4-212ENST00000601919 GNL1P36915 607 aaPredicted RBP19.82■□□□□ 0.76
SSBP4-212ENST00000601919 LHX1P48742 406 aa19.82■□□□□ 0.76
SSBP4-212ENST00000601919 BMS1Q14692 1282 aaKnown RBP19.82■□□□□ 0.76
SSBP4-212ENST00000601919 SPA17Q15506 151 aa19.82■□□□□ 0.76
SSBP4-212ENST00000601919 TIGD5Q53EQ6 642 aa19.82■□□□□ 0.76
SSBP4-212ENST00000601919 SPOUT1Q5T280 376 aaKnown RBP19.82■□□□□ 0.76
SSBP4-212ENST00000601919 SLC47A2Q86VL8 602 aa19.82■□□□□ 0.76
SSBP4-212ENST00000601919 PDCL2Q8N4E4 241 aa19.82■□□□□ 0.76
SSBP4-212ENST00000601919 EPS8L1Q8TE68 723 aa19.82■□□□□ 0.76
SSBP4-212ENST00000601919 RABGGTAQ92696 567 aa19.82■□□□□ 0.76
SSBP4-212ENST00000601919 TMEM176AQ96HP8 235 aa19.82■□□□□ 0.76
SSBP4-212ENST00000601919 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 184.6 ms