RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 DUSP9Q99956 384 aaKnown RBP21.16■□□□□ 0.98
SHKBP1-214ENST00000597396 CLSTN3Q9BQT9 956 aa21.16■□□□□ 0.98
SHKBP1-214ENST00000597396 DSEQ9UL01 958 aa21.16■□□□□ 0.98
SHKBP1-214ENST00000597396 CDY1Q9Y6F8 540 aa21.16■□□□□ 0.98
SHKBP1-214ENST00000597396 NCOR1O75376 2440 aa21.16■□□□□ 0.98
SHKBP1-214ENST00000597396 IKBKBO14920 756 aa21.15■□□□□ 0.98
SHKBP1-214ENST00000597396 HUS1O60921 280 aa21.15■□□□□ 0.98
SHKBP1-214ENST00000597396 OR1D2P34982 312 aa21.15■□□□□ 0.98
SHKBP1-214ENST00000597396 MRPL58Q14197 206 aaKnown RBP21.15■□□□□ 0.98
SHKBP1-214ENST00000597396 CLUL1Q15846 466 aa21.15■□□□□ 0.98
SHKBP1-214ENST00000597396 DPCR1Q3MIW9 517 aa21.15■□□□□ 0.98
SHKBP1-214ENST00000597396 CCDC40Q4G0X9 1142 aa21.15■□□□□ 0.98
SHKBP1-214ENST00000597396 TDRD10Q5VZ19 366 aaKnown RBP21.15■□□□□ 0.98
SHKBP1-214ENST00000597396 SCARA3Q6AZY7 606 aa21.15■□□□□ 0.98
SHKBP1-214ENST00000597396 OVOS1Q6IE37 1185 aa21.15■□□□□ 0.98
SHKBP1-214ENST00000597396 ELMSAN1Q6PJG2 1045 aa21.15■□□□□ 0.98
SHKBP1-214ENST00000597396 TMEM184AQ6ZMB5 413 aa21.15■□□□□ 0.98
SHKBP1-214ENST00000597396 RBM43Q6ZSC3 357 aaKnown RBP21.15■□□□□ 0.98
SHKBP1-214ENST00000597396 FILIP1Q7Z7B0 1213 aa21.15■□□□□ 0.98
SHKBP1-214ENST00000597396 SYAP1Q96A49 352 aaPredicted RBP21.15■□□□□ 0.98
SHKBP1-214ENST00000597396 BORCS6Q96GS4 357 aa21.15■□□□□ 0.98
SHKBP1-214ENST00000597396 MMRN2Q9H8L6 949 aa21.15■□□□□ 0.98
SHKBP1-214ENST00000597396 DZANK1Q9NVP4 752 aa21.15■□□□□ 0.98
SHKBP1-214ENST00000597396 RWDD2AQ9UIY3 292 aa21.15■□□□□ 0.98
SHKBP1-214ENST00000597396 SNX9Q9Y5X1 595 aa21.15■□□□□ 0.98
SHKBP1-214ENST00000597396 TCF20Q9UGU0 1960 aaKnown RBP21.15■□□□□ 0.98
SHKBP1-214ENST00000597396 ADAM12O43184 909 aa21.14■□□□□ 0.97
SHKBP1-214ENST00000597396 FGFR1OPO95684 399 aaKnown RBP21.14■□□□□ 0.97
SHKBP1-214ENST00000597396 CST3P01034 146 aaPredicted RBP21.14■□□□□ 0.97
SHKBP1-214ENST00000597396 C4BPAP04003 597 aaKnown RBP21.14■□□□□ 0.97
SHKBP1-214ENST00000597396 ARPP19P56211 112 aa21.14■□□□□ 0.97
SHKBP1-214ENST00000597396 DCAF17Q5H9S7 520 aaPredicted RBP21.14■□□□□ 0.97
SHKBP1-214ENST00000597396 C1orf220Q5T0J3 134 aa21.14■□□□□ 0.97
SHKBP1-214ENST00000597396 TCERG1LQ5VWI1 586 aa21.14■□□□□ 0.97
SHKBP1-214ENST00000597396 ANKRD54Q6NXT1 300 aa21.14■□□□□ 0.97
SHKBP1-214ENST00000597396 SASS6Q6UVJ0 657 aa21.14■□□□□ 0.97
SHKBP1-214ENST00000597396 CLEC1BQ9P126 229 aa21.14■□□□□ 0.97
SHKBP1-214ENST00000597396 ARMCX3Q9UH62 379 aaPredicted RBP21.14■□□□□ 0.97
SHKBP1-214ENST00000597396 DPP7Q9UHL4 492 aa21.14■□□□□ 0.97
SHKBP1-214ENST00000597396 CD207Q9UJ71 328 aa21.14■□□□□ 0.97
SHKBP1-214ENST00000597396 FBXL5Q9UKA1 691 aa21.14■□□□□ 0.97
SHKBP1-214ENST00000597396 TGM5O43548 720 aa21.13■□□□□ 0.97
SHKBP1-214ENST00000597396 STX10O60499 249 aa21.13■□□□□ 0.97
SHKBP1-214ENST00000597396 OAZ2O95190 189 aa21.13■□□□□ 0.97
SHKBP1-214ENST00000597396 CYP11A1P05108 521 aa21.13■□□□□ 0.97
SHKBP1-214ENST00000597396 GCLMP48507 274 aa21.13■□□□□ 0.97
SHKBP1-214ENST00000597396 MYL6P60660 151 aa21.13■□□□□ 0.97
SHKBP1-214ENST00000597396 NCOA4Q13772 614 aa21.13■□□□□ 0.97
SHKBP1-214ENST00000597396 RAB33AQ14088 237 aa21.13■□□□□ 0.97
SHKBP1-214ENST00000597396 TPD52L1Q16890 204 aaPredicted RBP21.13■□□□□ 0.97
SHKBP1-214ENST00000597396 LEXMQ3ZCV2 418 aa21.13■□□□□ 0.97
SHKBP1-214ENST00000597396 ZACNQ401N2 412 aa21.13■□□□□ 0.97
SHKBP1-214ENST00000597396 WSCD1Q658N2 575 aa21.13■□□□□ 0.97
SHKBP1-214ENST00000597396 CAVIN1Q6NZI2 390 aaKnown RBP21.13■□□□□ 0.97
SHKBP1-214ENST00000597396 RSPO2Q6UXX9 243 aaPredicted RBP21.13■□□□□ 0.97
SHKBP1-214ENST00000597396 SV2AQ7L0J3 742 aa21.13■□□□□ 0.97
SHKBP1-214ENST00000597396 SRRTQ9BXP5 876 aaKnown RBP21.13■□□□□ 0.97
SHKBP1-214ENST00000597396 OXCT2Q9BYC2 517 aaPredicted RBP21.13■□□□□ 0.97
SHKBP1-214ENST00000597396 METTL14Q9HCE5 456 aaKnown RBP21.13■□□□□ 0.97
SHKBP1-214ENST00000597396 MAN1C1Q9NR34 630 aa21.13■□□□□ 0.97
SHKBP1-214ENST00000597396 GDAP2Q9NXN4 497 aa21.13■□□□□ 0.97
SHKBP1-214ENST00000597396 TMEM63CQ9P1W3 806 aa21.13■□□□□ 0.97
SHKBP1-214ENST00000597396 C2orf16Q68DN1 1984 aa21.12■□□□□ 0.97
SHKBP1-214ENST00000597396 C1RP00736 705 aa21.12■□□□□ 0.97
SHKBP1-214ENST00000597396 SPATA31D3P0C874 917 aa21.12■□□□□ 0.97
SHKBP1-214ENST00000597396 CPB1P15086 417 aa21.12■□□□□ 0.97
SHKBP1-214ENST00000597396 HOXB8P17481 243 aaPredicted RBP21.12■□□□□ 0.97
SHKBP1-214ENST00000597396 ATICP31939 592 aa21.12■□□□□ 0.97
SHKBP1-214ENST00000597396 PIK3CAP42336 1068 aa21.12■□□□□ 0.97
SHKBP1-214ENST00000597396 ROR1Q01973 937 aa21.12■□□□□ 0.97
SHKBP1-214ENST00000597396 PPP3CAQ08209 521 aa21.12■□□□□ 0.97
SHKBP1-214ENST00000597396 SLC8B1Q6J4K2 584 aa21.12■□□□□ 0.97
SHKBP1-214ENST00000597396 SPATA31D4Q6ZUB0 917 aa21.12■□□□□ 0.97
SHKBP1-214ENST00000597396 FRMD5Q7Z6J6 570 aa21.12■□□□□ 0.97
SHKBP1-214ENST00000597396 THEM5Q8N1Q8 247 aa21.12■□□□□ 0.97
SHKBP1-214ENST00000597396 MSLNLQ96KJ4 702 aa21.12■□□□□ 0.97
SHKBP1-214ENST00000597396 TMEM8AQ9HCN3 771 aa21.12■□□□□ 0.97
SHKBP1-214ENST00000597396 OR6C75A6NL08 312 aa21.11■□□□□ 0.97
SHKBP1-214ENST00000597396 TBC1D4O60343 1298 aa21.11■□□□□ 0.97
SHKBP1-214ENST00000597396 VNN1O95497 513 aa21.11■□□□□ 0.97
SHKBP1-214ENST00000597396 GNA14O95837 355 aa21.11■□□□□ 0.97
SHKBP1-214ENST00000597396 HLA-DRAP01903 254 aa21.11■□□□□ 0.97
SHKBP1-214ENST00000597396 GTF2H1P32780 548 aa21.11■□□□□ 0.97
SHKBP1-214ENST00000597396 TNNC1P63316 161 aa21.11■□□□□ 0.97
SHKBP1-214ENST00000597396 ZNF699Q32M78 642 aa21.11■□□□□ 0.97
SHKBP1-214ENST00000597396 LILRA6Q6PI73 481 aa21.11■□□□□ 0.97
SHKBP1-214ENST00000597396 TMEM86AQ8N2M4 240 aa21.11■□□□□ 0.97
SHKBP1-214ENST00000597396 PDCL2Q8N4E4 241 aa21.11■□□□□ 0.97
SHKBP1-214ENST00000597396 TOP6BLQ8N6T0 577 aa21.11■□□□□ 0.97
SHKBP1-214ENST00000597396 KREMEN2Q8NCW0 462 aa21.11■□□□□ 0.97
SHKBP1-214ENST00000597396 HDAC7Q8WUI4 952 aa21.11■□□□□ 0.97
SHKBP1-214ENST00000597396 MMS19Q96T76 1030 aa21.11■□□□□ 0.97
SHKBP1-214ENST00000597396 APOL5Q9BWW9 433 aa21.11■□□□□ 0.97
SHKBP1-214ENST00000597396 PLEKHA4Q9H4M7 779 aa21.11■□□□□ 0.97
SHKBP1-214ENST00000597396 FBXW11Q9UKB1 542 aa21.11■□□□□ 0.97
SHKBP1-214ENST00000597396 L1RE1Q9UN81 338 aa21.11■□□□□ 0.97
SHKBP1-214ENST00000597396 XIRP2A4UGR9 3374 aa21.1■□□□□ 0.97
SHKBP1-214ENST00000597396 STAU1O95793 577 aaKnown RBP21.1■□□□□ 0.97
SHKBP1-214ENST00000597396 ERCC5P28715 1186 aaPredicted RBP21.1■□□□□ 0.97
SHKBP1-214ENST00000597396 MXI1P50539 228 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms