RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 HNRNPA1P09651 372 aaKnown RBP eCLIP18.61■□□□□ 0.57
SHKBP1-212ENST00000596163 KRT13P13646 458 aa18.61■□□□□ 0.57
SHKBP1-212ENST00000596163 SSTR3P32745 418 aaPredicted RBP18.61■□□□□ 0.57
SHKBP1-212ENST00000596163 PSMC2P35998 433 aaKnown RBP18.61■□□□□ 0.57
SHKBP1-212ENST00000596163 ROR1Q01973 937 aa18.61■□□□□ 0.57
SHKBP1-212ENST00000596163 BFSP1Q12934 665 aa18.61■□□□□ 0.57
SHKBP1-212ENST00000596163 TRPC3Q13507 836 aa18.61■□□□□ 0.57
SHKBP1-212ENST00000596163 PPM1LQ5SGD2 360 aa18.61■□□□□ 0.57
SHKBP1-212ENST00000596163 TMC2Q8TDI7 906 aa18.61■□□□□ 0.57
SHKBP1-212ENST00000596163 PARD3BQ8TEW8 1205 aa18.61■□□□□ 0.57
SHKBP1-212ENST00000596163 DHTKD1Q96HY7 919 aaPredicted RBP18.61■□□□□ 0.57
SHKBP1-212ENST00000596163 HPDLQ96IR7 371 aa18.61■□□□□ 0.57
SHKBP1-212ENST00000596163 PIDD1Q9HB75 910 aa18.61■□□□□ 0.57
SHKBP1-212ENST00000596163 MAN1B1Q9UKM7 699 aa18.61■□□□□ 0.57
SHKBP1-212ENST00000596163 XYLBO75191 536 aa18.6■□□□□ 0.57
SHKBP1-212ENST00000596163 ABLIM3O94929 683 aa18.6■□□□□ 0.57
SHKBP1-212ENST00000596163 C8AP07357 584 aa18.6■□□□□ 0.57
SHKBP1-212ENST00000596163 CPB1P15086 417 aa18.6■□□□□ 0.57
SHKBP1-212ENST00000596163 HOXA9P31269 272 aa18.6■□□□□ 0.57
SHKBP1-212ENST00000596163 ENPEPQ07075 957 aa18.6■□□□□ 0.57
SHKBP1-212ENST00000596163 ZCWPW2Q504Y3 356 aa18.6■□□□□ 0.57
SHKBP1-212ENST00000596163 CENPPQ6IPU0 288 aa18.6■□□□□ 0.57
SHKBP1-212ENST00000596163 INTS8Q75QN2 995 aaKnown RBP18.6■□□□□ 0.57
SHKBP1-212ENST00000596163 ADSSL1Q8N142 457 aa18.6■□□□□ 0.57
SHKBP1-212ENST00000596163 GJD3Q8N144 294 aa18.6■□□□□ 0.57
SHKBP1-212ENST00000596163 TMEM86AQ8N2M4 240 aa18.6■□□□□ 0.57
SHKBP1-212ENST00000596163 TRIML1Q8N9V2 468 aa18.6■□□□□ 0.57
SHKBP1-212ENST00000596163 SPATA18Q8TC71 538 aa18.6■□□□□ 0.57
SHKBP1-212ENST00000596163 BORCS6Q96GS4 357 aa18.6■□□□□ 0.57
SHKBP1-212ENST00000596163 PRKD2Q9BZL6 878 aa18.6■□□□□ 0.57
SHKBP1-212ENST00000596163 GDAP2Q9NXN4 497 aa18.6■□□□□ 0.57
SHKBP1-212ENST00000596163 AFF4Q9UHB7 1163 aaKnown RBP18.6■□□□□ 0.57
SHKBP1-212ENST00000596163 NR2E1Q9Y466 385 aa18.6■□□□□ 0.57
SHKBP1-212ENST00000596163 PDCD11Q14690 1871 aaKnown RBP18.6■□□□□ 0.57
SHKBP1-212ENST00000596163 REV3LO60673 3130 aa18.59■□□□□ 0.57
SHKBP1-212ENST00000596163 PTPRJQ12913 1337 aa18.59■□□□□ 0.57
SHKBP1-212ENST00000596163 TNFRSF10AO00220 468 aa18.59■□□□□ 0.57
SHKBP1-212ENST00000596163 PRRG1O14668 218 aa18.59■□□□□ 0.57
SHKBP1-212ENST00000596163 IKBKBO14920 756 aa18.59■□□□□ 0.57
SHKBP1-212ENST00000596163 PAPLNO95428 1278 aa18.59■□□□□ 0.57
SHKBP1-212ENST00000596163 ATF2P15336 505 aa18.59■□□□□ 0.57
SHKBP1-212ENST00000596163 ATICP31939 592 aa18.59■□□□□ 0.57
SHKBP1-212ENST00000596163 CASP4P49662 377 aa18.59■□□□□ 0.57
SHKBP1-212ENST00000596163 CLDN10P78369 228 aa18.59■□□□□ 0.57
SHKBP1-212ENST00000596163 FKBP3Q00688 224 aaKnown RBP18.59■□□□□ 0.57
SHKBP1-212ENST00000596163 ZP2Q05996 745 aa18.59■□□□□ 0.57
SHKBP1-212ENST00000596163 LRRC63Q05C16 580 aa18.59■□□□□ 0.57
SHKBP1-212ENST00000596163 ISM2Q6H9L7 571 aa18.59■□□□□ 0.57
SHKBP1-212ENST00000596163 DPH6Q7L8W6 267 aa18.59■□□□□ 0.57
SHKBP1-212ENST00000596163 FAM186BQ8IYM0 893 aa18.59■□□□□ 0.57
SHKBP1-212ENST00000596163 CXorf38Q8TB03 319 aa18.59■□□□□ 0.57
SHKBP1-212ENST00000596163 SMG7Q92540 1137 aaKnown RBP18.59■□□□□ 0.57
SHKBP1-212ENST00000596163 MKNK1Q9BUB5 465 aa18.59■□□□□ 0.57
SHKBP1-212ENST00000596163 KIAA1468Q9P260 1216 aa18.59■□□□□ 0.57
SHKBP1-212ENST00000596163 SIX4Q9UIU6 781 aa18.59■□□□□ 0.57
SHKBP1-212ENST00000596163 SNX9Q9Y5X1 595 aa18.59■□□□□ 0.57
SHKBP1-212ENST00000596163 WDR27A2RRH5 827 aa18.58■□□□□ 0.56
SHKBP1-212ENST00000596163 C19orf67A6NJJ6 358 aa18.58■□□□□ 0.56
SHKBP1-212ENST00000596163 LRRIQ3A6PVS8 624 aaPredicted RBP18.58■□□□□ 0.56
SHKBP1-212ENST00000596163 RFPL2O75678 378 aa18.58■□□□□ 0.56
SHKBP1-212ENST00000596163 EPB41P11171 864 aaKnown RBP18.58■□□□□ 0.56
SHKBP1-212ENST00000596163 CCNE1P24864 410 aa18.58■□□□□ 0.56
SHKBP1-212ENST00000596163 VAMP7P51809 220 aa18.58■□□□□ 0.56
SHKBP1-212ENST00000596163 SMARCB1Q12824 385 aa18.58■□□□□ 0.56
SHKBP1-212ENST00000596163 GPR17Q13304 367 aa18.58■□□□□ 0.56
SHKBP1-212ENST00000596163 BIRC3Q13489 604 aa18.58■□□□□ 0.56
SHKBP1-212ENST00000596163 MORC3Q14149 939 aa18.58■□□□□ 0.56
SHKBP1-212ENST00000596163 CAMK4Q16566 473 aa18.58■□□□□ 0.56
SHKBP1-212ENST00000596163 WSCD1Q658N2 575 aa18.58■□□□□ 0.56
SHKBP1-212ENST00000596163 TCEAL8Q8IYN2 117 aa18.58■□□□□ 0.56
SHKBP1-212ENST00000596163 TOP6BLQ8N6T0 577 aa18.58■□□□□ 0.56
SHKBP1-212ENST00000596163 SLC7A14Q8TBB6 771 aa18.58■□□□□ 0.56
SHKBP1-212ENST00000596163 ZNF516Q92618 1163 aa18.58■□□□□ 0.56
SHKBP1-212ENST00000596163 NECAB3Q96P71 396 aaPredicted RBP18.58■□□□□ 0.56
SHKBP1-212ENST00000596163 CYP4F11Q9HBI6 524 aa18.58■□□□□ 0.56
SHKBP1-212ENST00000596163 CUL9Q8IWT3 2517 aa18.58■□□□□ 0.56
SHKBP1-212ENST00000596163 BICDL2A1A5D9 508 aa18.57■□□□□ 0.56
SHKBP1-212ENST00000596163 STX10O60499 249 aa18.57■□□□□ 0.56
SHKBP1-212ENST00000596163 AKAP3O75969 853 aa18.57■□□□□ 0.56
SHKBP1-212ENST00000596163 LRG1P02750 347 aa18.57■□□□□ 0.56
SHKBP1-212ENST00000596163 POU2F2P09086 479 aa18.57■□□□□ 0.56
SHKBP1-212ENST00000596163 WEE2P0C1S8 567 aa18.57■□□□□ 0.56
SHKBP1-212ENST00000596163 FAM163BP0C2L3 166 aa18.57■□□□□ 0.56
SHKBP1-212ENST00000596163 LHX1P48742 406 aa18.57■□□□□ 0.56
SHKBP1-212ENST00000596163 MYL7Q01449 175 aa18.57■□□□□ 0.56
SHKBP1-212ENST00000596163 ADCY1Q08828 1119 aa18.57■□□□□ 0.56
SHKBP1-212ENST00000596163 DCP1BQ8IZD4 617 aaKnown RBP18.57■□□□□ 0.56
SHKBP1-212ENST00000596163 SYAP1Q96A49 352 aaPredicted RBP18.57■□□□□ 0.56
SHKBP1-212ENST00000596163 RPGRIP1Q96KN7 1286 aa18.57■□□□□ 0.56
SHKBP1-212ENST00000596163 POMKQ9H5K3 350 aa18.57■□□□□ 0.56
SHKBP1-212ENST00000596163 LMBRD1Q9NUN5 540 aa18.57■□□□□ 0.56
SHKBP1-212ENST00000596163 SPTBN5Q9NRC6 3674 aaKnown RBP18.56■□□□□ 0.56
SHKBP1-212ENST00000596163 LOC730098B7Z3J9 87 aa18.56■□□□□ 0.56
SHKBP1-212ENST00000596163 BIN1O00499 593 aa18.56■□□□□ 0.56
SHKBP1-212ENST00000596163 STAU1O95793 577 aaKnown RBP18.56■□□□□ 0.56
SHKBP1-212ENST00000596163 CST3P01034 146 aaPredicted RBP18.56■□□□□ 0.56
SHKBP1-212ENST00000596163 C4BPAP04003 597 aaKnown RBP18.56■□□□□ 0.56
SHKBP1-212ENST00000596163 TSPY1Q01534 308 aa18.56■□□□□ 0.56
SHKBP1-212ENST00000596163 ANKRD40Q6AI12 368 aa18.56■□□□□ 0.56
SHKBP1-212ENST00000596163 FOXR2Q6PJQ5 311 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms