RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 C17orf75Q9HAS0 396 aa9.53□□□□□ -0.88
SMAD4-215ENST00000592911 THG1LQ9NWX6 298 aaKnown RBP9.53□□□□□ -0.88
SMAD4-215ENST00000592911 CNTN3Q9P232 1028 aa9.53□□□□□ -0.88
SMAD4-215ENST00000592911 CACNG4Q9UBN1 327 aa9.53□□□□□ -0.88
SMAD4-215ENST00000592911 EBF1Q9UH73 591 aa9.53□□□□□ -0.88
SMAD4-215ENST00000592911 FBXL5Q9UKA1 691 aa9.53□□□□□ -0.88
SMAD4-215ENST00000592911 ZMIZ1Q9ULJ6 1067 aa9.53□□□□□ -0.88
SMAD4-215ENST00000592911 MYH11P35749 1972 aa9.53□□□□□ -0.88
SMAD4-215ENST00000592911 THADAQ6YHU6 1953 aa9.53□□□□□ -0.88
SMAD4-215ENST00000592911 PLXND1Q9Y4D7 1925 aa9.52□□□□□ -0.88
SMAD4-215ENST00000592911 GON4LQ3T8J9 2241 aa9.52□□□□□ -0.88
SMAD4-215ENST00000592911 ABCA7Q8IZY2 2146 aa9.52□□□□□ -0.89
SMAD4-215ENST00000592911 OR6C75A6NL08 312 aa9.52□□□□□ -0.89
SMAD4-215ENST00000592911 PODXLO00592 558 aa9.52□□□□□ -0.89
SMAD4-215ENST00000592911 ZBTB39O15060 712 aa9.52□□□□□ -0.89
SMAD4-215ENST00000592911 NEMFO60524 1076 aa9.52□□□□□ -0.89
SMAD4-215ENST00000592911 USO1O60763 962 aaKnown RBP9.52□□□□□ -0.89
SMAD4-215ENST00000592911 CCDC192P0DO97 292 aa9.52□□□□□ -0.89
SMAD4-215ENST00000592911 MPLP40238 635 aa9.52□□□□□ -0.89
SMAD4-215ENST00000592911 EPHB3P54753 998 aa9.52□□□□□ -0.89
SMAD4-215ENST00000592911 TWF1Q12792 350 aa9.52□□□□□ -0.89
SMAD4-215ENST00000592911 SMARCB1Q12824 385 aa9.52□□□□□ -0.89
SMAD4-215ENST00000592911 CACNA1EQ15878 2313 aa9.52□□□□□ -0.89
SMAD4-215ENST00000592911 PROX2Q3B8N5 592 aa9.52□□□□□ -0.89
SMAD4-215ENST00000592911 CTXN3Q4LDR2 81 aa9.52□□□□□ -0.89
SMAD4-215ENST00000592911 ARHGAP15Q53QZ3 475 aa9.52□□□□□ -0.89
SMAD4-215ENST00000592911 ATF7IP2Q5U623 682 aa9.52□□□□□ -0.89
SMAD4-215ENST00000592911 PIK3AP1Q6ZUJ8 805 aa9.52□□□□□ -0.89
SMAD4-215ENST00000592911 ITIH5Q86UX2 942 aa9.52□□□□□ -0.89
SMAD4-215ENST00000592911 CDR2LQ86X02 465 aaPredicted RBP9.52□□□□□ -0.89
SMAD4-215ENST00000592911 NOSTRINQ8IVI9 506 aa9.52□□□□□ -0.89
SMAD4-215ENST00000592911 C3orf58Q8NDZ4 430 aa9.52□□□□□ -0.89
SMAD4-215ENST00000592911 SHKBP1Q8TBC3 707 aa9.52□□□□□ -0.89
SMAD4-215ENST00000592911 ZSWIM3Q96MP5 696 aa9.52□□□□□ -0.89
SMAD4-215ENST00000592911 ARRDC1-AS1Q9H2J1 176 aa9.52□□□□□ -0.89
SMAD4-215ENST00000592911 SLITRK6Q9H5Y7 841 aa9.52□□□□□ -0.89
SMAD4-215ENST00000592911 TMEM134Q9H6X4 195 aa9.52□□□□□ -0.89
SMAD4-215ENST00000592911 NCOA5Q9HCD5 579 aaKnown RBP9.52□□□□□ -0.89
SMAD4-215ENST00000592911 CEP72Q9P209 647 aa9.52□□□□□ -0.89
SMAD4-215ENST00000592911 WASF3Q9UPY6 502 aa9.52□□□□□ -0.89
SMAD4-215ENST00000592911 NUB1Q9Y5A7 615 aa9.52□□□□□ -0.89
SMAD4-215ENST00000592911 KIAA1549LQ6ZVL6 1849 aa9.52□□□□□ -0.89
SMAD4-215ENST00000592911 SPEGQ15772 3267 aa9.51□□□□□ -0.89
SMAD4-215ENST00000592911 M0QZQ0 153 aa9.51□□□□□ -0.89
SMAD4-215ENST00000592911 TRDMT1O14717 391 aaKnown RBP9.51□□□□□ -0.89
SMAD4-215ENST00000592911 SEC24AO95486 1093 aa9.51□□□□□ -0.89
SMAD4-215ENST00000592911 MCF2P10911 925 aa9.51□□□□□ -0.89
SMAD4-215ENST00000592911 DRD1P21728 446 aa9.51□□□□□ -0.89
SMAD4-215ENST00000592911 FECHP22830 423 aa9.51□□□□□ -0.89
SMAD4-215ENST00000592911 DDX6P26196 483 aaKnown RBP eCLIP9.51□□□□□ -0.89
SMAD4-215ENST00000592911 RPA1P27694 616 aa9.51□□□□□ -0.89
SMAD4-215ENST00000592911 CDC25CP30307 473 aa9.51□□□□□ -0.89
SMAD4-215ENST00000592911 VIPR2P41587 438 aa9.51□□□□□ -0.89
SMAD4-215ENST00000592911 MCM2P49736 904 aa9.51□□□□□ -0.89
SMAD4-215ENST00000592911 PRSS12P56730 875 aa9.51□□□□□ -0.89
SMAD4-215ENST00000592911 GRSF1Q12849 480 aaKnown RBP eCLIP9.51□□□□□ -0.89
SMAD4-215ENST00000592911 GPR17Q13304 367 aa9.51□□□□□ -0.89
SMAD4-215ENST00000592911 TOB2Q14106 344 aaPredicted RBP9.51□□□□□ -0.89
SMAD4-215ENST00000592911 MYBPC2Q14324 1141 aa9.51□□□□□ -0.89
SMAD4-215ENST00000592911 TEAD2Q15562 447 aa9.51□□□□□ -0.89
SMAD4-215ENST00000592911 ITPRIPL2Q3MIP1 535 aa9.51□□□□□ -0.89
SMAD4-215ENST00000592911 TMEM196Q5HYL7 178 aa9.51□□□□□ -0.89
SMAD4-215ENST00000592911 HAUS3Q68CZ6 603 aa9.51□□□□□ -0.89
SMAD4-215ENST00000592911 TMC8Q8IU68 726 aa9.51□□□□□ -0.89
SMAD4-215ENST00000592911 ARID3BQ8IVW6 561 aaPredicted RBP9.51□□□□□ -0.89
SMAD4-215ENST00000592911 BPIFB1Q8TDL5 484 aa9.51□□□□□ -0.89
SMAD4-215ENST00000592911 PSMG2Q969U7 264 aa9.51□□□□□ -0.89
SMAD4-215ENST00000592911 ACDQ96AP0 544 aa9.51□□□□□ -0.89
SMAD4-215ENST00000592911 MTMR9Q96QG7 549 aa9.51□□□□□ -0.89
SMAD4-215ENST00000592911 TMEM209Q96SK2 561 aa9.51□□□□□ -0.89
SMAD4-215ENST00000592911 SLC4A5Q9BY07 1137 aa9.51□□□□□ -0.89
SMAD4-215ENST00000592911 LRRC3Q9BY71 257 aa9.51□□□□□ -0.89
SMAD4-215ENST00000592911 KIF9Q9HAQ2 790 aa9.51□□□□□ -0.89
SMAD4-215ENST00000592911 PLEKHA5Q9HAU0 1116 aa9.51□□□□□ -0.89
SMAD4-215ENST00000592911 PTPRHQ9HD43 1115 aa9.51□□□□□ -0.89
SMAD4-215ENST00000592911 SLC8A2Q9UPR5 921 aa9.51□□□□□ -0.89
SMAD4-215ENST00000592911 GDAQ9Y2T3 454 aa9.51□□□□□ -0.89
SMAD4-215ENST00000592911 RBM19Q9Y4C8 960 aaKnown RBP9.51□□□□□ -0.89
SMAD4-215ENST00000592911 NEUROG3Q9Y4Z2 214 aa9.51□□□□□ -0.89
SMAD4-215ENST00000592911 YIPF1Q9Y548 306 aa9.51□□□□□ -0.89
SMAD4-215ENST00000592911 CYP46A1Q9Y6A2 500 aa9.51□□□□□ -0.89
SMAD4-215ENST00000592911 SLC38A8A6NNN8 435 aa9.5□□□□□ -0.89
SMAD4-215ENST00000592911 UPK3BL1B0FP48 263 aa9.5□□□□□ -0.89
SMAD4-215ENST00000592911 UPK3BL2E5RIL1 263 aa9.5□□□□□ -0.89
SMAD4-215ENST00000592911 H0Y626 953 aa9.5□□□□□ -0.89
SMAD4-215ENST00000592911 K7ERI5 159 aa9.5□□□□□ -0.89
SMAD4-215ENST00000592911 AXIN1O15169 862 aa9.5□□□□□ -0.89
SMAD4-215ENST00000592911 TRIM16O95361 564 aa9.5□□□□□ -0.89
SMAD4-215ENST00000592911 SPATA31C1P0DKV0 1188 aa9.5□□□□□ -0.89
SMAD4-215ENST00000592911 MYL4P12829 197 aa9.5□□□□□ -0.89
SMAD4-215ENST00000592911 CPA1P15085 419 aa9.5□□□□□ -0.89
SMAD4-215ENST00000592911 CPB1P15086 417 aa9.5□□□□□ -0.89
SMAD4-215ENST00000592911 TYMPP19971 482 aa9.5□□□□□ -0.89
SMAD4-215ENST00000592911 CYP3A5P20815 502 aa9.5□□□□□ -0.89
SMAD4-215ENST00000592911 SCP2P22307 547 aa9.5□□□□□ -0.89
SMAD4-215ENST00000592911 PROZP22891 400 aa9.5□□□□□ -0.89
SMAD4-215ENST00000592911 MARCKSP29966 332 aaPredicted RBP9.5□□□□□ -0.89
SMAD4-215ENST00000592911 KRT2P35908 639 aa9.5□□□□□ -0.89
SMAD4-215ENST00000592911 BRCC3P46736 316 aa9.5□□□□□ -0.89
SMAD4-215ENST00000592911 ALDH1A3P47895 512 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms