RNA–Protein interactions for RNA: ENST00000592186.5

SMAD4-214, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,306 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-214ENST00000592186 USP41Q3LFD5 358 aa11.43□□□□□ -0.58
SMAD4-214ENST00000592186 PHLDB3Q6NSJ2 640 aa11.43□□□□□ -0.58
SMAD4-214ENST00000592186 CD300LGQ6UXG3 332 aa11.43□□□□□ -0.58
SMAD4-214ENST00000592186 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.43□□□□□ -0.58
SMAD4-214ENST00000592186 LIMS2Q7Z4I7 341 aa11.43□□□□□ -0.58
SMAD4-214ENST00000592186 PPM1KQ8N3J5 372 aa11.43□□□□□ -0.58
SMAD4-214ENST00000592186 C3orf58Q8NDZ4 430 aa11.43□□□□□ -0.58
SMAD4-214ENST00000592186 RABGGTAQ92696 567 aa11.43□□□□□ -0.58
SMAD4-214ENST00000592186 TATDN2Q93075 761 aa11.43□□□□□ -0.58
SMAD4-214ENST00000592186 PI4K2AQ9BTU6 479 aa11.43□□□□□ -0.58
SMAD4-214ENST00000592186 LSM14BQ9BX40 385 aaKnown RBP11.43□□□□□ -0.58
SMAD4-214ENST00000592186 BCO2Q9BYV7 579 aa11.43□□□□□ -0.58
SMAD4-214ENST00000592186 MARCH5Q9NX47 278 aa11.43□□□□□ -0.58
SMAD4-214ENST00000592186 COLQQ9Y215 455 aaPredicted RBP11.43□□□□□ -0.58
SMAD4-214ENST00000592186 RALGAPA2Q2PPJ7 1873 aa11.43□□□□□ -0.58
SMAD4-214ENST00000592186 NT5C1B-RDH14C9J2C7 533 aa11.42□□□□□ -0.58
SMAD4-214ENST00000592186 H7C4K7 107 aa11.42□□□□□ -0.58
SMAD4-214ENST00000592186 OAZ2O95190 189 aa11.42□□□□□ -0.58
SMAD4-214ENST00000592186 LINC00271P0C7V0 271 aa11.42□□□□□ -0.58
SMAD4-214ENST00000592186 UCHL3P15374 230 aa11.42□□□□□ -0.58
SMAD4-214ENST00000592186 FGFR3P22607 806 aa11.42□□□□□ -0.58
SMAD4-214ENST00000592186 CTNNB1P35222 781 aa11.42□□□□□ -0.58
SMAD4-214ENST00000592186 CREMQ03060 361 aa11.42□□□□□ -0.58
SMAD4-214ENST00000592186 LRMPQ12912 555 aa11.42□□□□□ -0.58
SMAD4-214ENST00000592186 TRIM14Q14142 442 aa11.42□□□□□ -0.58
SMAD4-214ENST00000592186 SOWAHAQ2M3V2 549 aa11.42□□□□□ -0.58
SMAD4-214ENST00000592186 FAM171A1Q5VUB5 890 aa11.42□□□□□ -0.58
SMAD4-214ENST00000592186 PPP2R2DQ66LE6 453 aa11.42□□□□□ -0.58
SMAD4-214ENST00000592186 PDE12Q6L8Q7 609 aaKnown RBP11.42□□□□□ -0.58
SMAD4-214ENST00000592186 KIAA1841Q6NSI8 718 aa11.42□□□□□ -0.58
SMAD4-214ENST00000592186 FUT10Q6P4F1 479 aa11.42□□□□□ -0.58
SMAD4-214ENST00000592186 ANKS3Q6ZW76 656 aa11.42□□□□□ -0.58
SMAD4-214ENST00000592186 CACNA2D4Q7Z3S7 1137 aa11.42□□□□□ -0.58
SMAD4-214ENST00000592186 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.42□□□□□ -0.58
SMAD4-214ENST00000592186 PPFIBP1Q86W92 1011 aa11.42□□□□□ -0.58
SMAD4-214ENST00000592186 UNC93AQ86WB7 457 aa11.42□□□□□ -0.58
SMAD4-214ENST00000592186 VSTM4Q8IW00 320 aa11.42□□□□□ -0.58
SMAD4-214ENST00000592186 THEM5Q8N1Q8 247 aa11.42□□□□□ -0.58
SMAD4-214ENST00000592186 KLHL23Q8NBE8 558 aa11.42□□□□□ -0.58
SMAD4-214ENST00000592186 ZNF397Q8NF99 534 aaPredicted RBP11.42□□□□□ -0.58
SMAD4-214ENST00000592186 TIFAQ96CG3 184 aa11.42□□□□□ -0.58
SMAD4-214ENST00000592186 STK33Q9BYT3 514 aa11.42□□□□□ -0.58
SMAD4-214ENST00000592186 GPR62Q9BZJ7 368 aa11.42□□□□□ -0.58
SMAD4-214ENST00000592186 NUCKS1Q9H1E3 243 aaKnown RBP11.42□□□□□ -0.58
SMAD4-214ENST00000592186 SNX25Q9H3E2 840 aa11.42□□□□□ -0.58
SMAD4-214ENST00000592186 APOBEC3GQ9HC16 384 aaKnown RBP11.42□□□□□ -0.58
SMAD4-214ENST00000592186 SIX2Q9NPC8 291 aa11.42□□□□□ -0.58
SMAD4-214ENST00000592186 CHST7Q9NS84 486 aa11.42□□□□□ -0.58
SMAD4-214ENST00000592186 FAM207AQ9NSI2 230 aaPredicted RBP11.42□□□□□ -0.58
SMAD4-214ENST00000592186 CEP72Q9P209 647 aa11.42□□□□□ -0.58
SMAD4-214ENST00000592186 HCSTQ9UBK5 93 aa11.42□□□□□ -0.58
SMAD4-214ENST00000592186 CACNG4Q9UBN1 327 aa11.42□□□□□ -0.58
SMAD4-214ENST00000592186 DNAJC12Q9UKB3 198 aa11.42□□□□□ -0.58
SMAD4-214ENST00000592186 KIAA1257Q9ULG3 409 aa11.42□□□□□ -0.58
SMAD4-214ENST00000592186 MYO6Q9UM54 1294 aa11.42□□□□□ -0.58
SMAD4-214ENST00000592186 YBX2Q9Y2T7 364 aaKnown RBP11.42□□□□□ -0.58
SMAD4-214ENST00000592186 TMEM265A0A087WTH1 108 aa11.41□□□□□ -0.58
SMAD4-214ENST00000592186 A0A1W2PQJ5 194 aa11.41□□□□□ -0.58
SMAD4-214ENST00000592186 H3BNC9 293 aa11.41□□□□□ -0.58
SMAD4-214ENST00000592186 AP5Z1O43299 807 aa11.41□□□□□ -0.58
SMAD4-214ENST00000592186 ADCY5O95622 1261 aa11.41□□□□□ -0.58
SMAD4-214ENST00000592186 SOD2P04179 222 aa11.41□□□□□ -0.58
SMAD4-214ENST00000592186 ITGB1P05556 798 aa11.41□□□□□ -0.58
SMAD4-214ENST00000592186 CCDC172P0C7W6 258 aa11.41□□□□□ -0.58
SMAD4-214ENST00000592186 WARSP23381 471 aaKnown RBP11.41□□□□□ -0.58
SMAD4-214ENST00000592186 DNAJB2P25686 324 aa11.41□□□□□ -0.58
SMAD4-214ENST00000592186 CDC25BP30305 580 aa11.41□□□□□ -0.58
SMAD4-214ENST00000592186 GNL1P36915 607 aaPredicted RBP11.41□□□□□ -0.58
SMAD4-214ENST00000592186 PBX2P40425 430 aa11.41□□□□□ -0.58
SMAD4-214ENST00000592186 PBX3P40426 434 aa11.41□□□□□ -0.58
SMAD4-214ENST00000592186 ASPAP45381 313 aa11.41□□□□□ -0.58
SMAD4-214ENST00000592186 BRCC3P46736 316 aa11.41□□□□□ -0.58
SMAD4-214ENST00000592186 YWHAHQ04917 246 aaPredicted RBP11.41□□□□□ -0.58
SMAD4-214ENST00000592186 SCARA3Q6AZY7 606 aa11.41□□□□□ -0.58
SMAD4-214ENST00000592186 SPOPLQ6IQ16 392 aa11.41□□□□□ -0.58
SMAD4-214ENST00000592186 DPY19L2P1Q6NXN4 242 aa11.41□□□□□ -0.58
SMAD4-214ENST00000592186 RRAGAQ7L523 313 aa11.41□□□□□ -0.58
SMAD4-214ENST00000592186 RNF168Q8IYW5 571 aaPredicted RBP11.41□□□□□ -0.58
SMAD4-214ENST00000592186 PDCL2Q8N4E4 241 aa11.41□□□□□ -0.58
SMAD4-214ENST00000592186 FBXO22Q8NEZ5 403 aa11.41□□□□□ -0.58
SMAD4-214ENST00000592186 HASPINQ8TF76 798 aa11.41□□□□□ -0.58
SMAD4-214ENST00000592186 C17orf80Q9BSJ5 609 aa11.41□□□□□ -0.58
SMAD4-214ENST00000592186 TTPALQ9BTX7 342 aa11.41□□□□□ -0.58
SMAD4-214ENST00000592186 NKX2-4Q9H2Z4 354 aa11.41□□□□□ -0.58
SMAD4-214ENST00000592186 BARX2Q9UMQ3 279 aaPredicted RBP11.41□□□□□ -0.58
SMAD4-214ENST00000592186 ANK1P16157 1881 aa11.41□□□□□ -0.58
SMAD4-214ENST00000592186 FNDC1Q4ZHG4 1894 aaPredicted RBP11.41□□□□□ -0.58
SMAD4-214ENST00000592186 GOLGA6L6A8MZA4 724 aa11.4□□□□□ -0.58
SMAD4-214ENST00000592186 GABRDO14764 452 aa11.4□□□□□ -0.58
SMAD4-214ENST00000592186 LRRN2O75325 713 aa11.4□□□□□ -0.58
SMAD4-214ENST00000592186 NOL4O94818 638 aa11.4□□□□□ -0.58
SMAD4-214ENST00000592186 WEE2P0C1S8 567 aa11.4□□□□□ -0.58
SMAD4-214ENST00000592186 IGFBP6P24592 240 aaPredicted RBP11.4□□□□□ -0.58
SMAD4-214ENST00000592186 PCSK1P29120 753 aa11.4□□□□□ -0.58
SMAD4-214ENST00000592186 BPIFB4P59827 614 aa11.4□□□□□ -0.58
SMAD4-214ENST00000592186 POLR2FP61218 127 aaKnown RBP11.4□□□□□ -0.58
SMAD4-214ENST00000592186 INCA1Q0VD86 236 aa11.4□□□□□ -0.58
SMAD4-214ENST00000592186 MRPL58Q14197 206 aaKnown RBP11.4□□□□□ -0.58
SMAD4-214ENST00000592186 WSCD1Q658N2 575 aa11.4□□□□□ -0.58
SMAD4-214ENST00000592186 OVOS1Q6IE37 1185 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms