RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 C21orf59P57076 290 aa6.64□□□□□ -1.35
SMAD4-212ENST00000591126 TPI1P60174 286 aa6.64□□□□□ -1.35
SMAD4-212ENST00000591126 PSMC1P62191 440 aaKnown RBP6.64□□□□□ -1.35
SMAD4-212ENST00000591126 RCN2Q14257 317 aa6.64□□□□□ -1.35
SMAD4-212ENST00000591126 PSMD5Q16401 504 aa6.64□□□□□ -1.35
SMAD4-212ENST00000591126 SNRNP35Q16560 246 aaKnown RBP6.64□□□□□ -1.35
SMAD4-212ENST00000591126 PTF1AQ7RTS3 328 aa6.64□□□□□ -1.35
SMAD4-212ENST00000591126 FRMD8P1Q9BZ68 369 aaPredicted RBP6.64□□□□□ -1.35
SMAD4-212ENST00000591126 PLEKHA4Q9H4M7 779 aa6.64□□□□□ -1.35
SMAD4-212ENST00000591126 CDH9Q9ULB4 789 aa6.64□□□□□ -1.35
SMAD4-212ENST00000591126 BRPF3Q9ULD4 1205 aa6.64□□□□□ -1.35
SMAD4-212ENST00000591126 KCPQ6ZWJ8 1503 aa6.64□□□□□ -1.35
SMAD4-212ENST00000591126 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.64□□□□□ -1.35
SMAD4-212ENST00000591126 ZSCAN5CA6NGD5 496 aaPredicted RBP6.64□□□□□ -1.35
SMAD4-212ENST00000591126 C2CD2LO14523 706 aa6.64□□□□□ -1.35
SMAD4-212ENST00000591126 TREHO43280 583 aa6.64□□□□□ -1.35
SMAD4-212ENST00000591126 ADCY5O95622 1261 aa6.64□□□□□ -1.35
SMAD4-212ENST00000591126 KRT1P04264 644 aa6.64□□□□□ -1.35
SMAD4-212ENST00000591126 BEX3Q00994 111 aa6.64□□□□□ -1.35
SMAD4-212ENST00000591126 C6orf118Q5T5N4 469 aa6.64□□□□□ -1.35
SMAD4-212ENST00000591126 LZTR1Q8N653 840 aa6.64□□□□□ -1.35
SMAD4-212ENST00000591126 DNAAF3Q8N9W5 541 aa6.64□□□□□ -1.35
SMAD4-212ENST00000591126 C7orf43Q8WVR3 580 aa6.64□□□□□ -1.35
SMAD4-212ENST00000591126 HPS3Q969F9 1004 aa6.64□□□□□ -1.35
SMAD4-212ENST00000591126 FDXACB1Q9BRP7 624 aaPredicted RBP6.64□□□□□ -1.35
SMAD4-212ENST00000591126 MCOLN1Q9GZU1 580 aa6.64□□□□□ -1.35
SMAD4-212ENST00000591126 NDST4Q9H3R1 872 aa6.64□□□□□ -1.35
SMAD4-212ENST00000591126 PPANQ9NQ55 473 aaKnown RBP6.64□□□□□ -1.35
SMAD4-212ENST00000591126 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.64□□□□□ -1.35
SMAD4-212ENST00000591126 BTBD7Q9P203 1132 aa6.64□□□□□ -1.35
SMAD4-212ENST00000591126 TOPAZ1Q8N9V7 1692 aa6.64□□□□□ -1.35
SMAD4-212ENST00000591126 PITPNM1O00562 1244 aa6.64□□□□□ -1.35
SMAD4-212ENST00000591126 ERBB2P04626 1255 aa6.64□□□□□ -1.35
SMAD4-212ENST00000591126 PYGLP06737 847 aa6.64□□□□□ -1.35
SMAD4-212ENST00000591126 SKILP12757 684 aa6.64□□□□□ -1.35
SMAD4-212ENST00000591126 CLCN3P51790 818 aa6.64□□□□□ -1.35
SMAD4-212ENST00000591126 MNAT1P51948 309 aa6.64□□□□□ -1.35
SMAD4-212ENST00000591126 PDE1BQ01064 536 aa6.64□□□□□ -1.35
SMAD4-212ENST00000591126 ZBTB16Q05516 673 aa6.64□□□□□ -1.35
SMAD4-212ENST00000591126 TMEM62Q0P6H9 643 aa6.64□□□□□ -1.35
SMAD4-212ENST00000591126 GRSF1Q12849 480 aaKnown RBP eCLIP6.64□□□□□ -1.35
SMAD4-212ENST00000591126 AARS2Q5JTZ9 985 aaKnown RBP6.64□□□□□ -1.35
SMAD4-212ENST00000591126 RASEFQ8IZ41 740 aa6.64□□□□□ -1.35
SMAD4-212ENST00000591126 FAXDC2Q96IV6 333 aa6.64□□□□□ -1.35
SMAD4-212ENST00000591126 PAWRQ96IZ0 340 aaKnown RBP6.64□□□□□ -1.35
SMAD4-212ENST00000591126 GMLQ99445 158 aa6.64□□□□□ -1.35
SMAD4-212ENST00000591126 NAPGQ99747 312 aaPredicted RBP6.64□□□□□ -1.35
SMAD4-212ENST00000591126 GUCA1BQ9UMX6 200 aa6.64□□□□□ -1.35
SMAD4-212ENST00000591126 SPACA6W5XKT8 324 aa6.64□□□□□ -1.35
SMAD4-212ENST00000591126 GOLGA8IPA6NC78 632 aa6.64□□□□□ -1.35
SMAD4-212ENST00000591126 PODXLO00592 558 aa6.64□□□□□ -1.35
SMAD4-212ENST00000591126 MAPK13O15264 365 aa6.64□□□□□ -1.35
SMAD4-212ENST00000591126 COBLO75128 1261 aa6.64□□□□□ -1.35
SMAD4-212ENST00000591126 PIGHQ14442 188 aaPredicted RBP6.64□□□□□ -1.35
SMAD4-212ENST00000591126 P3H1Q32P28 736 aa6.64□□□□□ -1.35
SMAD4-212ENST00000591126 ADCK5Q3MIX3 580 aa6.64□□□□□ -1.35
SMAD4-212ENST00000591126 TREML2Q5T2D2 321 aa6.64□□□□□ -1.35
SMAD4-212ENST00000591126 SLC30A10Q6XR72 485 aa6.64□□□□□ -1.35
SMAD4-212ENST00000591126 PBKQ96KB5 322 aa6.64□□□□□ -1.35
SMAD4-212ENST00000591126 SMC6Q96SB8 1091 aa6.64□□□□□ -1.35
SMAD4-212ENST00000591126 KRT12Q99456 494 aa6.64□□□□□ -1.35
SMAD4-212ENST00000591126 BCO2Q9BYV7 579 aa6.64□□□□□ -1.35
SMAD4-212ENST00000591126 NSMCE4AQ9NXX6 385 aa6.64□□□□□ -1.35
SMAD4-212ENST00000591126 HDAC6Q9UBN7 1215 aa6.64□□□□□ -1.35
SMAD4-212ENST00000591126 PGAP2Q9UHJ9 254 aa6.64□□□□□ -1.35
SMAD4-212ENST00000591126 C2CD2Q9Y426 696 aa6.64□□□□□ -1.35
SMAD4-212ENST00000591126 MORC2Q9Y6X9 1032 aaPredicted RBP6.64□□□□□ -1.35
SMAD4-212ENST00000591126 AK9Q5TCS8 1911 aa6.63□□□□□ -1.35
SMAD4-212ENST00000591126 CHEK2O96017 543 aa6.63□□□□□ -1.35
SMAD4-212ENST00000591126 RPN2P04844 631 aa6.63□□□□□ -1.35
SMAD4-212ENST00000591126 CES1P23141 567 aa6.63□□□□□ -1.35
SMAD4-212ENST00000591126 HIRAP54198 1017 aaPredicted RBP6.63□□□□□ -1.35
SMAD4-212ENST00000591126 NRLP54845 237 aa6.63□□□□□ -1.35
SMAD4-212ENST00000591126 TAF3Q5VWG9 929 aa6.63□□□□□ -1.35
SMAD4-212ENST00000591126 VSTM1Q6UX27 236 aa6.63□□□□□ -1.35
SMAD4-212ENST00000591126 CMTR2Q8IYT2 770 aaKnown RBP6.63□□□□□ -1.35
SMAD4-212ENST00000591126 NLNQ9BYT8 704 aa6.63□□□□□ -1.35
SMAD4-212ENST00000591126 DNAJC12Q9UKB3 198 aa6.63□□□□□ -1.35
SMAD4-212ENST00000591126 PCDHB2Q9Y5E7 798 aa6.63□□□□□ -1.35
SMAD4-212ENST00000591126 CLIC4Q9Y696 253 aa6.63□□□□□ -1.35
SMAD4-212ENST00000591126 LTN1O94822 1766 aa6.63□□□□□ -1.35
SMAD4-212ENST00000591126 AP1G2O75843 785 aa6.63□□□□□ -1.35
SMAD4-212ENST00000591126 POLR2EP19388 210 aaKnown RBP6.63□□□□□ -1.35
SMAD4-212ENST00000591126 SOX5P35711 763 aa6.63□□□□□ -1.35
SMAD4-212ENST00000591126 HSPA9P38646 679 aaKnown RBP6.63□□□□□ -1.35
SMAD4-212ENST00000591126 SOX10P56693 466 aa6.63□□□□□ -1.35
SMAD4-212ENST00000591126 DEUP1Q05D60 604 aa6.63□□□□□ -1.35
SMAD4-212ENST00000591126 PNOCQ13519 176 aa6.63□□□□□ -1.35
SMAD4-212ENST00000591126 SKIDA1Q1XH10 827 aa6.63□□□□□ -1.35
SMAD4-212ENST00000591126 ZSCAN23Q3MJ62 389 aa6.63□□□□□ -1.35
SMAD4-212ENST00000591126 ILDR2Q71H61 639 aa6.63□□□□□ -1.35
SMAD4-212ENST00000591126 INPP4AQ96PE3 977 aaPredicted RBP6.63□□□□□ -1.35
SMAD4-212ENST00000591126 SYT15Q9BQS2 421 aa6.63□□□□□ -1.35
SMAD4-212ENST00000591126 FAM107BQ9H098 131 aa6.63□□□□□ -1.35
SMAD4-212ENST00000591126 PORCNQ9H237 461 aa6.63□□□□□ -1.35
SMAD4-212ENST00000591126 ELAC1Q9H777 363 aaKnown RBP6.63□□□□□ -1.35
SMAD4-212ENST00000591126 SUSD2Q9UGT4 822 aa6.63□□□□□ -1.35
SMAD4-212ENST00000591126 ZNF148Q9UQR1 794 aa6.63□□□□□ -1.35
SMAD4-212ENST00000591126 CYP3A7-CYP3A51PA0A087WV96 503 aa6.63□□□□□ -1.35
SMAD4-212ENST00000591126 BNIP3LO60238 219 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms