RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 DNM2P50570 870 aa6.26□□□□□ -1.41
DNMT1-220ENST00000589351 NLRP11P59045 1033 aaKnown RBP6.26□□□□□ -1.41
DNMT1-220ENST00000589351 KIZQ2M2Z5 673 aa6.26□□□□□ -1.41
DNMT1-220ENST00000589351 TMTC3Q6ZXV5 915 aa6.26□□□□□ -1.41
DNMT1-220ENST00000589351 SGMS1Q86VZ5 419 aa6.26□□□□□ -1.41
DNMT1-220ENST00000589351 PPFIBP1Q86W92 1011 aa6.26□□□□□ -1.41
DNMT1-220ENST00000589351 NT5DC4Q86YG4 428 aa6.26□□□□□ -1.41
DNMT1-220ENST00000589351 GALNT12Q8IXK2 581 aa6.26□□□□□ -1.41
DNMT1-220ENST00000589351 SMAP1Q8IYB5 467 aaPredicted RBP6.26□□□□□ -1.41
DNMT1-220ENST00000589351 MRPL43Q8N983 215 aaKnown RBP6.26□□□□□ -1.41
DNMT1-220ENST00000589351 RNF169Q8NCN4 708 aa6.26□□□□□ -1.41
DNMT1-220ENST00000589351 EXOC6Q8TAG9 804 aa6.26□□□□□ -1.41
DNMT1-220ENST00000589351 ZBTB10Q96DT7 871 aa6.26□□□□□ -1.41
DNMT1-220ENST00000589351 HEXIM2Q96MH2 286 aaKnown RBP6.26□□□□□ -1.41
DNMT1-220ENST00000589351 ZNF577Q9BSK1 485 aa6.26□□□□□ -1.41
DNMT1-220ENST00000589351 APOL5Q9BWW9 433 aa6.26□□□□□ -1.41
DNMT1-220ENST00000589351 INO80BQ9C086 356 aaPredicted RBP6.26□□□□□ -1.41
DNMT1-220ENST00000589351 IL25Q9H293 177 aa6.26□□□□□ -1.41
DNMT1-220ENST00000589351 ADAM7Q9H2U9 754 aa6.26□□□□□ -1.41
DNMT1-220ENST00000589351 CWH43Q9H720 699 aa6.26□□□□□ -1.41
DNMT1-220ENST00000589351 C6orf50Q9HD87 102 aa6.26□□□□□ -1.41
DNMT1-220ENST00000589351 FAM86C1Q9NVL1 165 aa6.26□□□□□ -1.41
DNMT1-220ENST00000589351 DBR1Q9UK59 544 aaKnown RBP6.26□□□□□ -1.41
DNMT1-220ENST00000589351 PCDHGC5Q9Y5F6 944 aa6.26□□□□□ -1.41
DNMT1-220ENST00000589351 LOXHD1Q8IVV2 1947 aa6.26□□□□□ -1.41
DNMT1-220ENST00000589351 A0A0U1RQF3 1178 aa6.25□□□□□ -1.41
DNMT1-220ENST00000589351 HIDE1A8MVS5 230 aa6.25□□□□□ -1.41
DNMT1-220ENST00000589351 RBAK-RBAKDNI3L0D1 243 aa6.25□□□□□ -1.41
DNMT1-220ENST00000589351 ZBTB43O43298 467 aa6.25□□□□□ -1.41
DNMT1-220ENST00000589351 ZNF862O60290 1169 aa6.25□□□□□ -1.41
DNMT1-220ENST00000589351 FZD6O60353 706 aa6.25□□□□□ -1.41
DNMT1-220ENST00000589351 MGEA5O60502 916 aa6.25□□□□□ -1.41
DNMT1-220ENST00000589351 VTNP04004 478 aa6.25□□□□□ -1.41
DNMT1-220ENST00000589351 INHBBP09529 407 aa6.25□□□□□ -1.41
DNMT1-220ENST00000589351 SLFN14P0C7P3 912 aa6.25□□□□□ -1.41
DNMT1-220ENST00000589351 FGFR1P11362 822 aa6.25□□□□□ -1.41
DNMT1-220ENST00000589351 GSPT1P15170 499 aaKnown RBP6.25□□□□□ -1.41
DNMT1-220ENST00000589351 SP100P23497 879 aaPredicted RBP6.25□□□□□ -1.41
DNMT1-220ENST00000589351 GNA11P29992 359 aa6.25□□□□□ -1.41
DNMT1-220ENST00000589351 CLCN5P51795 746 aa6.25□□□□□ -1.41
DNMT1-220ENST00000589351 POLGP54098 1239 aaPredicted RBP6.25□□□□□ -1.41
DNMT1-220ENST00000589351 VCPP55072 806 aaKnown RBP6.25□□□□□ -1.41
DNMT1-220ENST00000589351 AKAP17AQ02040 695 aaKnown RBP6.25□□□□□ -1.41
DNMT1-220ENST00000589351 APOBRQ0VD83 1088 aa6.25□□□□□ -1.41
DNMT1-220ENST00000589351 ITGB3BPQ13352 177 aaPredicted RBP6.25□□□□□ -1.41
DNMT1-220ENST00000589351 KCNC3Q14003 757 aa6.25□□□□□ -1.41
DNMT1-220ENST00000589351 NONOQ15233 471 aaKnown RBP eCLIP6.25□□□□□ -1.41
DNMT1-220ENST00000589351 WWC2Q6AWC2 1192 aa6.25□□□□□ -1.41
DNMT1-220ENST00000589351 EFCAB12Q6NXP0 572 aa6.25□□□□□ -1.41
DNMT1-220ENST00000589351 SYCE2Q6PIF2 218 aa6.25□□□□□ -1.41
DNMT1-220ENST00000589351 MPZL3Q6UWV2 235 aa6.25□□□□□ -1.41
DNMT1-220ENST00000589351 TRMT1LQ7Z2T5 733 aaKnown RBP6.25□□□□□ -1.41
DNMT1-220ENST00000589351 FAM228AQ86W67 206 aa6.25□□□□□ -1.41
DNMT1-220ENST00000589351 MICU3Q86XE3 530 aa6.25□□□□□ -1.41
DNMT1-220ENST00000589351 ECHDC2Q86YB7 292 aa6.25□□□□□ -1.41
DNMT1-220ENST00000589351 CCDC60Q8IWA6 550 aaPredicted RBP6.25□□□□□ -1.41
DNMT1-220ENST00000589351 ZDHHC14Q8IZN3 488 aa6.25□□□□□ -1.41
DNMT1-220ENST00000589351 TOP6BLQ8N6T0 577 aa6.25□□□□□ -1.41
DNMT1-220ENST00000589351 TDRD5Q8NAT2 981 aaKnown RBP6.25□□□□□ -1.41
DNMT1-220ENST00000589351 CYP2W1Q8TAV3 490 aa6.25□□□□□ -1.41
DNMT1-220ENST00000589351 BICD2Q8TD16 824 aa6.25□□□□□ -1.41
DNMT1-220ENST00000589351 NKD2Q969F2 451 aaPredicted RBP6.25□□□□□ -1.41
DNMT1-220ENST00000589351 PKNOX2Q96KN3 472 aa6.25□□□□□ -1.41
DNMT1-220ENST00000589351 CASD1Q96PB1 797 aa6.25□□□□□ -1.41
DNMT1-220ENST00000589351 RTP3Q9BQQ7 232 aa6.25□□□□□ -1.41
DNMT1-220ENST00000589351 GCOM2Q9BZD3 368 aaPredicted RBP6.25□□□□□ -1.41
DNMT1-220ENST00000589351 CYP26B1Q9NR63 512 aa6.25□□□□□ -1.41
DNMT1-220ENST00000589351 CHST12Q9NRB3 414 aa6.25□□□□□ -1.41
DNMT1-220ENST00000589351 BARHL2Q9NY43 387 aa6.25□□□□□ -1.41
DNMT1-220ENST00000589351 DPP7Q9UHL4 492 aa6.25□□□□□ -1.41
DNMT1-220ENST00000589351 PCOLCE2Q9UKZ9 415 aa6.25□□□□□ -1.41
DNMT1-220ENST00000589351 PLXNA4Q9HCM2 1894 aa6.25□□□□□ -1.41
DNMT1-220ENST00000589351 TECTAO75443 2155 aa6.25□□□□□ -1.41
DNMT1-220ENST00000589351 C5orf42Q9H799 3197 aa6.24□□□□□ -1.41
DNMT1-220ENST00000589351 ZNF318Q5VUA4 2279 aa6.24□□□□□ -1.41
DNMT1-220ENST00000589351 FNDC1Q4ZHG4 1894 aaPredicted RBP6.24□□□□□ -1.41
DNMT1-220ENST00000589351 WDFY4Q6ZS81 3184 aa6.24□□□□□ -1.41
DNMT1-220ENST00000589351 C2orf71A6NGG8 1288 aa6.24□□□□□ -1.41
DNMT1-220ENST00000589351 NPIPB6E9PJ23 425 aa6.24□□□□□ -1.41
DNMT1-220ENST00000589351 SLC27A2O14975 620 aa6.24□□□□□ -1.41
DNMT1-220ENST00000589351 CREB3O43889 395 aa6.24□□□□□ -1.41
DNMT1-220ENST00000589351 GPR32O75388 356 aa6.24□□□□□ -1.41
DNMT1-220ENST00000589351 C22orf31O95567 290 aa6.24□□□□□ -1.41
DNMT1-220ENST00000589351 CCNE2O96020 404 aa6.24□□□□□ -1.41
DNMT1-220ENST00000589351 CYP3A4P08684 503 aa6.24□□□□□ -1.41
DNMT1-220ENST00000589351 NPR3P17342 541 aa6.24□□□□□ -1.41
DNMT1-220ENST00000589351 ITPKAP23677 461 aa6.24□□□□□ -1.41
DNMT1-220ENST00000589351 SFNP31947 248 aa6.24□□□□□ -1.41
DNMT1-220ENST00000589351 NBL1P41271 181 aa6.24□□□□□ -1.41
DNMT1-220ENST00000589351 RBM10P98175 930 aaKnown RBP6.24□□□□□ -1.41
DNMT1-220ENST00000589351 RNASELQ05823 741 aaKnown RBP6.24□□□□□ -1.41
DNMT1-220ENST00000589351 KRT32Q14532 448 aa6.24□□□□□ -1.41
DNMT1-220ENST00000589351 DSC3Q14574 896 aa6.24□□□□□ -1.41
DNMT1-220ENST00000589351 NECTIN1Q15223 517 aa6.24□□□□□ -1.41
DNMT1-220ENST00000589351 RARS2Q5T160 578 aaKnown RBP6.24□□□□□ -1.41
DNMT1-220ENST00000589351 JAKMIP3Q5VZ66 844 aa6.24□□□□□ -1.41
DNMT1-220ENST00000589351 CREB3L3Q68CJ9 461 aa6.24□□□□□ -1.41
DNMT1-220ENST00000589351 KRTAP5-3Q6L8H2 238 aa6.24□□□□□ -1.41
DNMT1-220ENST00000589351 APOA5Q6Q788 366 aa6.24□□□□□ -1.41
DNMT1-220ENST00000589351 GLB1LQ6UWU2 654 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms