RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 OR6C75A6NL08 312 aa14.87□□□□□ -0.03
HDAC5-208ENST00000588419 MAN2B1O00754 1011 aa14.87□□□□□ -0.03
HDAC5-208ENST00000588419 VNN2O95498 520 aa14.87□□□□□ -0.03
HDAC5-208ENST00000588419 CYP3A5P20815 502 aa14.87□□□□□ -0.03
HDAC5-208ENST00000588419 CCNE1P24864 410 aa14.87□□□□□ -0.03
HDAC5-208ENST00000588419 ACOT2P49753 483 aa14.87□□□□□ -0.03
HDAC5-208ENST00000588419 TMEM132DQ14C87 1099 aa14.87□□□□□ -0.03
HDAC5-208ENST00000588419 LPAL2Q16609 132 aa14.87□□□□□ -0.03
HDAC5-208ENST00000588419 KYAT1Q16773 422 aa14.87□□□□□ -0.03
HDAC5-208ENST00000588419 LARP1BQ659C4 914 aaKnown RBP14.87□□□□□ -0.03
HDAC5-208ENST00000588419 ARMCX5Q6P1M9 558 aa14.87□□□□□ -0.03
HDAC5-208ENST00000588419 KCTD17Q8N5Z5 321 aa14.87□□□□□ -0.03
HDAC5-208ENST00000588419 SUMF1Q8NBK3 374 aa14.87□□□□□ -0.03
HDAC5-208ENST00000588419 ATAD1Q8NBU5 361 aa14.87□□□□□ -0.03
HDAC5-208ENST00000588419 RAD54LQ92698 747 aa14.87□□□□□ -0.03
HDAC5-208ENST00000588419 CLDN23Q96B33 292 aa14.87□□□□□ -0.03
HDAC5-208ENST00000588419 SENP8Q96LD8 212 aa14.87□□□□□ -0.03
HDAC5-208ENST00000588419 BLOC1S4Q9NUP1 217 aa14.87□□□□□ -0.03
HDAC5-208ENST00000588419 ZSCAN32Q9NX65 697 aa14.87□□□□□ -0.03
HDAC5-208ENST00000588419 PCDHGA2Q9Y5H1 932 aa14.87□□□□□ -0.03
HDAC5-208ENST00000588419 DCHS1Q96JQ0 3298 aa14.87□□□□□ -0.03
HDAC5-208ENST00000588419 OTOGLQ3ZCN5 2332 aa14.87□□□□□ -0.03
HDAC5-208ENST00000588419 F5P12259 2224 aa14.86□□□□□ -0.03
HDAC5-208ENST00000588419 SLC38A8A6NNN8 435 aa14.86□□□□□ -0.03
HDAC5-208ENST00000588419 TISP43B9A030 160 aa14.86□□□□□ -0.03
HDAC5-208ENST00000588419 DPYSL4O14531 572 aa14.86□□□□□ -0.03
HDAC5-208ENST00000588419 MICAL2O94851 1124 aa14.86□□□□□ -0.03
HDAC5-208ENST00000588419 OAZ2O95190 189 aa14.86□□□□□ -0.03
HDAC5-208ENST00000588419 RPS9P46781 194 aaKnown RBP14.86□□□□□ -0.03
HDAC5-208ENST00000588419 SOX9P48436 509 aa14.86□□□□□ -0.03
HDAC5-208ENST00000588419 KPNA1P52294 538 aaPredicted RBP14.86□□□□□ -0.03
HDAC5-208ENST00000588419 ZBTB6Q15916 424 aa14.86□□□□□ -0.03
HDAC5-208ENST00000588419 MGAT5BQ3V5L5 792 aa14.86□□□□□ -0.03
HDAC5-208ENST00000588419 SLC39A12Q504Y0 691 aa14.86□□□□□ -0.03
HDAC5-208ENST00000588419 ZC2HC1CQ53FD0 456 aaPredicted RBP14.86□□□□□ -0.03
HDAC5-208ENST00000588419 SLC39A4Q6P5W5 647 aa14.86□□□□□ -0.03
HDAC5-208ENST00000588419 TMC8Q8IU68 726 aa14.86□□□□□ -0.03
HDAC5-208ENST00000588419 LARP4BQ92615 738 aaKnown RBP14.86□□□□□ -0.03
HDAC5-208ENST00000588419 SECISBP2LQ93073 1101 aaKnown RBP14.86□□□□□ -0.03
HDAC5-208ENST00000588419 LPIN3Q9BQK8 851 aa14.86□□□□□ -0.03
HDAC5-208ENST00000588419 DNAJC25Q9H1X3 360 aa14.86□□□□□ -0.03
HDAC5-208ENST00000588419 ATXN3LQ9H3M9 355 aa14.86□□□□□ -0.03
HDAC5-208ENST00000588419 LMAN1LQ9HAT1 526 aa14.86□□□□□ -0.03
HDAC5-208ENST00000588419 PRMT8Q9NR22 394 aaPredicted RBP14.86□□□□□ -0.03
HDAC5-208ENST00000588419 MAFFQ9ULX9 164 aa14.86□□□□□ -0.03
HDAC5-208ENST00000588419 SHISA7A6NL88 538 aa14.85□□□□□ -0.03
HDAC5-208ENST00000588419 ANKRD63C9JTQ0 380 aa14.85□□□□□ -0.03
HDAC5-208ENST00000588419 FAM189A1O60320 539 aa14.85□□□□□ -0.03
HDAC5-208ENST00000588419 PIGRP01833 764 aa14.85□□□□□ -0.03
HDAC5-208ENST00000588419 GABRR2P28476 465 aa14.85□□□□□ -0.03
HDAC5-208ENST00000588419 AARSP49588 968 aaKnown RBP eCLIP14.85□□□□□ -0.03
HDAC5-208ENST00000588419 EPHA5P54756 1037 aa14.85□□□□□ -0.03
HDAC5-208ENST00000588419 CYP4F8P98187 520 aa14.85□□□□□ -0.03
HDAC5-208ENST00000588419 GPR17Q13304 367 aa14.85□□□□□ -0.03
HDAC5-208ENST00000588419 SF3A1Q15459 793 aaKnown RBP14.85□□□□□ -0.03
HDAC5-208ENST00000588419 ARHGAP15Q53QZ3 475 aa14.85□□□□□ -0.03
HDAC5-208ENST00000588419 GPR158Q5T848 1215 aa14.85□□□□□ -0.03
HDAC5-208ENST00000588419 SPATA1Q5VX52 437 aa14.85□□□□□ -0.03
HDAC5-208ENST00000588419 C9orf57Q5W0N0 161 aa14.85□□□□□ -0.03
HDAC5-208ENST00000588419 ADALQ6DHV7 355 aa14.85□□□□□ -0.03
HDAC5-208ENST00000588419 PRR23BQ6ZRT6 265 aa14.85□□□□□ -0.03
HDAC5-208ENST00000588419 DYMQ7RTS9 669 aa14.85□□□□□ -0.03
HDAC5-208ENST00000588419 MAP4K3Q8IVH8 894 aa14.85□□□□□ -0.03
HDAC5-208ENST00000588419 MFSD6LQ8IWD5 586 aa14.85□□□□□ -0.03
HDAC5-208ENST00000588419 OR10T2Q8NGX3 314 aa14.85□□□□□ -0.03
HDAC5-208ENST00000588419 NOC3LQ8WTT2 800 aaKnown RBP14.85□□□□□ -0.03
HDAC5-208ENST00000588419 RSPRY1Q96DX4 576 aa14.85□□□□□ -0.03
HDAC5-208ENST00000588419 ZFYVE19Q96K21 471 aa14.85□□□□□ -0.03
HDAC5-208ENST00000588419 PYM1Q9BRP8 204 aaKnown RBP14.85□□□□□ -0.03
HDAC5-208ENST00000588419 OXCT2Q9BYC2 517 aaPredicted RBP14.85□□□□□ -0.03
HDAC5-208ENST00000588419 CHRDQ9H2X0 955 aa14.85□□□□□ -0.03
HDAC5-208ENST00000588419 CPSF3Q9UKF6 684 aaKnown RBP14.85□□□□□ -0.03
HDAC5-208ENST00000588419 USP18Q9UMW8 372 aa14.85□□□□□ -0.03
HDAC5-208ENST00000588419 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.85□□□□□ -0.03
HDAC5-208ENST00000588419 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.85□□□□□ -0.03
HDAC5-208ENST00000588419 A0A0B4J269 797 aa14.84□□□□□ -0.03
HDAC5-208ENST00000588419 MED19A0JLT2 244 aaPredicted RBP14.84□□□□□ -0.03
HDAC5-208ENST00000588419 TYMPP19971 482 aa14.84□□□□□ -0.03
HDAC5-208ENST00000588419 LONP1P36776 959 aaKnown RBP14.84□□□□□ -0.03
HDAC5-208ENST00000588419 ZNF131P52739 623 aa14.84□□□□□ -0.03
HDAC5-208ENST00000588419 LILRA4P59901 499 aa14.84□□□□□ -0.03
HDAC5-208ENST00000588419 FZD5Q13467 585 aa14.84□□□□□ -0.03
HDAC5-208ENST00000588419 MYBPC2Q14324 1141 aa14.84□□□□□ -0.03
HDAC5-208ENST00000588419 PPP2R5DQ14738 602 aa14.84□□□□□ -0.03
HDAC5-208ENST00000588419 VEPH1Q14D04 833 aa14.84□□□□□ -0.03
HDAC5-208ENST00000588419 TAF12Q16514 161 aa14.84□□□□□ -0.03
HDAC5-208ENST00000588419 RSPO4Q2I0M5 234 aaPredicted RBP14.84□□□□□ -0.03
HDAC5-208ENST00000588419 CENPPQ6IPU0 288 aa14.84□□□□□ -0.03
HDAC5-208ENST00000588419 METTL23Q86XA0 190 aa14.84□□□□□ -0.03
HDAC5-208ENST00000588419 SFR1Q86XK3 245 aa14.84□□□□□ -0.03
HDAC5-208ENST00000588419 KRI1Q8N9T8 703 aaKnown RBP14.84□□□□□ -0.03
HDAC5-208ENST00000588419 GCNAQ96QF7 691 aa14.84□□□□□ -0.03
HDAC5-208ENST00000588419 LRRC3Q9BY71 257 aa14.84□□□□□ -0.03
HDAC5-208ENST00000588419 GPR88Q9GZN0 384 aa14.84□□□□□ -0.03
HDAC5-208ENST00000588419 IKZF4Q9H2S9 585 aa14.84□□□□□ -0.03
HDAC5-208ENST00000588419 RBM12Q9NTZ6 932 aaKnown RBP14.84□□□□□ -0.03
HDAC5-208ENST00000588419 GMEB2Q9UKD1 530 aa14.84□□□□□ -0.03
HDAC5-208ENST00000588419 RAB23Q9ULC3 237 aa14.84□□□□□ -0.03
HDAC5-208ENST00000588419 CYB561D2O14569 222 aa14.83□□□□□ -0.04
HDAC5-208ENST00000588419 SLC26A4O43511 780 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms