RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 UIMC1Q96RL1 719 aa6.53□□□□□ -1.36
SF3B3-214ENST00000572365 SYT3Q9BQG1 590 aa6.53□□□□□ -1.36
SF3B3-214ENST00000572365 ZNF341Q9BYN7 854 aa6.53□□□□□ -1.36
SF3B3-214ENST00000572365 QRSL1Q9H0R6 528 aaKnown RBP6.53□□□□□ -1.36
SF3B3-214ENST00000572365 KCTD10Q9H3F6 313 aa6.53□□□□□ -1.36
SF3B3-214ENST00000572365 MTG2Q9H4K7 406 aa6.53□□□□□ -1.36
SF3B3-214ENST00000572365 KCNK12Q9HB15 430 aa6.53□□□□□ -1.36
SF3B3-214ENST00000572365 GCM1Q9NP62 436 aa6.53□□□□□ -1.36
SF3B3-214ENST00000572365 KCND1Q9NSA2 647 aa6.53□□□□□ -1.36
SF3B3-214ENST00000572365 DBF4Q9UBU7 674 aaPredicted RBP6.53□□□□□ -1.36
SF3B3-214ENST00000572365 EDARQ9UNE0 448 aa6.53□□□□□ -1.36
SF3B3-214ENST00000572365 MAP3K2Q9Y2U5 619 aa6.53□□□□□ -1.36
SF3B3-214ENST00000572365 GBF1Q92538 1859 aa6.53□□□□□ -1.36
SF3B3-214ENST00000572365 COL2A1P02458 1487 aaPredicted RBP6.53□□□□□ -1.36
SF3B3-214ENST00000572365 A0A0A6YYJ9 748 aa6.52□□□□□ -1.37
SF3B3-214ENST00000572365 MAFGO15525 162 aa6.52□□□□□ -1.37
SF3B3-214ENST00000572365 OPHN1O60890 802 aa6.52□□□□□ -1.37
SF3B3-214ENST00000572365 ZRANB2O95218 330 aaKnown RBP eCLIP6.52□□□□□ -1.37
SF3B3-214ENST00000572365 IGKV5-2P06315 115 aa6.52□□□□□ -1.37
SF3B3-214ENST00000572365 LPLP06858 475 aa6.52□□□□□ -1.37
SF3B3-214ENST00000572365 CT47B1P0C2W7 299 aaPredicted RBP6.52□□□□□ -1.37
SF3B3-214ENST00000572365 PF4V1P10720 104 aa6.52□□□□□ -1.37
SF3B3-214ENST00000572365 IL1R1P14778 569 aa6.52□□□□□ -1.37
SF3B3-214ENST00000572365 ITGB8P26012 769 aa6.52□□□□□ -1.37
SF3B3-214ENST00000572365 MMP14P50281 582 aa6.52□□□□□ -1.37
SF3B3-214ENST00000572365 EPHB3P54753 998 aa6.52□□□□□ -1.37
SF3B3-214ENST00000572365 LGALS4P56470 323 aa6.52□□□□□ -1.37
SF3B3-214ENST00000572365 IL13RA1P78552 427 aa6.52□□□□□ -1.37
SF3B3-214ENST00000572365 NFATC3Q12968 1075 aa6.52□□□□□ -1.37
SF3B3-214ENST00000572365 RTP5Q14D33 572 aa6.52□□□□□ -1.37
SF3B3-214ENST00000572365 ACAP2Q15057 778 aa6.52□□□□□ -1.37
SF3B3-214ENST00000572365 MUM1Q2TAK8 710 aa6.52□□□□□ -1.37
SF3B3-214ENST00000572365 GJC2Q5T442 439 aaPredicted RBP6.52□□□□□ -1.37
SF3B3-214ENST00000572365 CXXC5Q7LFL8 322 aaKnown RBP6.52□□□□□ -1.37
SF3B3-214ENST00000572365 ZNF804AQ7Z570 1209 aa6.52□□□□□ -1.37
SF3B3-214ENST00000572365 CCDC146Q8IYE0 955 aa6.52□□□□□ -1.37
SF3B3-214ENST00000572365 MAGEB6Q8N7X4 407 aa6.52□□□□□ -1.37
SF3B3-214ENST00000572365 CCDC191Q8NCU4 936 aa6.52□□□□□ -1.37
SF3B3-214ENST00000572365 ATXN2LQ8WWM7 1075 aaKnown RBP6.52□□□□□ -1.37
SF3B3-214ENST00000572365 AUTS2Q8WXX7 1259 aa6.52□□□□□ -1.37
SF3B3-214ENST00000572365 CLIC6Q96NY7 704 aa6.52□□□□□ -1.37
SF3B3-214ENST00000572365 C11orf84Q9BUA3 381 aaPredicted RBP6.52□□□□□ -1.37
SF3B3-214ENST00000572365 C1QTNF1Q9BXJ1 281 aa6.52□□□□□ -1.37
SF3B3-214ENST00000572365 ANKRD2Q9GZV1 360 aa6.52□□□□□ -1.37
SF3B3-214ENST00000572365 HYPKQ9NX55 129 aa6.52□□□□□ -1.37
SF3B3-214ENST00000572365 KCMF1Q9P0J7 381 aa6.52□□□□□ -1.37
SF3B3-214ENST00000572365 THEGQ9P2T0 379 aa6.52□□□□□ -1.37
SF3B3-214ENST00000572365 PRSS50Q9UI38 385 aa6.52□□□□□ -1.37
SF3B3-214ENST00000572365 ZFP69BQ9UJL9 534 aa6.52□□□□□ -1.37
SF3B3-214ENST00000572365 FRMPD3Q5JV73 1810 aa6.52□□□□□ -1.37
SF3B3-214ENST00000572365 PHIPQ8WWQ0 1821 aa6.51□□□□□ -1.37
SF3B3-214ENST00000572365 SPTBN4Q9H254 2564 aa6.51□□□□□ -1.37
SF3B3-214ENST00000572365 TRIM43BA6NCK2 446 aa6.51□□□□□ -1.37
SF3B3-214ENST00000572365 LRRC10BA6NIK2 292 aa6.51□□□□□ -1.37
SF3B3-214ENST00000572365 PRPF3O43395 683 aaKnown RBP6.51□□□□□ -1.37
SF3B3-214ENST00000572365 PCDH8O95206 1070 aa6.51□□□□□ -1.37
SF3B3-214ENST00000572365 CHGBP05060 677 aa6.51□□□□□ -1.37
SF3B3-214ENST00000572365 OSMP13725 252 aa6.51□□□□□ -1.37
SF3B3-214ENST00000572365 VCAM1P19320 739 aa6.51□□□□□ -1.37
SF3B3-214ENST00000572365 GLRBP48167 497 aa6.51□□□□□ -1.37
SF3B3-214ENST00000572365 GPR15P49685 360 aa6.51□□□□□ -1.37
SF3B3-214ENST00000572365 SLC5A3P53794 718 aa6.51□□□□□ -1.37
SF3B3-214ENST00000572365 FOXO4P98177 505 aa6.51□□□□□ -1.37
SF3B3-214ENST00000572365 MLANAQ16655 118 aa6.51□□□□□ -1.37
SF3B3-214ENST00000572365 ANO4Q32M45 955 aa6.51□□□□□ -1.37
SF3B3-214ENST00000572365 TMEM31Q5JXX7 168 aa6.51□□□□□ -1.37
SF3B3-214ENST00000572365 LCE3BQ5TA77 95 aa6.51□□□□□ -1.37
SF3B3-214ENST00000572365 KYQ8NBH2 561 aa6.51□□□□□ -1.37
SF3B3-214ENST00000572365 OR14C36Q8NHC7 312 aa6.51□□□□□ -1.37
SF3B3-214ENST00000572365 TSPEARQ8WU66 669 aa6.51□□□□□ -1.37
SF3B3-214ENST00000572365 TRIM43Q96BQ3 446 aaPredicted RBP6.51□□□□□ -1.37
SF3B3-214ENST00000572365 CCDC136Q96JN2 1154 aa6.51□□□□□ -1.37
SF3B3-214ENST00000572365 TACO1Q9BSH4 297 aaKnown RBP6.51□□□□□ -1.37
SF3B3-214ENST00000572365 SGPP1Q9BX95 441 aa6.51□□□□□ -1.37
SF3B3-214ENST00000572365 HAPLN2Q9GZV7 340 aa6.51□□□□□ -1.37
SF3B3-214ENST00000572365 FTSJ1Q9UET6 329 aa6.51□□□□□ -1.37
SF3B3-214ENST00000572365 DPP7Q9UHL4 492 aa6.51□□□□□ -1.37
SF3B3-214ENST00000572365 NOB1Q9ULX3 412 aaKnown RBP6.51□□□□□ -1.37
SF3B3-214ENST00000572365 MAPK8IP3Q9UPT6 1336 aa6.5□□□□□ -1.37
SF3B3-214ENST00000572365 RLFQ13129 1914 aa6.5□□□□□ -1.37
SF3B3-214ENST00000572365 A0A1B0GUL6 1792 aa6.5□□□□□ -1.37
SF3B3-214ENST00000572365 GOLGA6CA6NDK9 693 aa6.5□□□□□ -1.37
SF3B3-214ENST00000572365 GOLGA6BA6NDN3 693 aa6.5□□□□□ -1.37
SF3B3-214ENST00000572365 CHL1O00533 1208 aa6.5□□□□□ -1.37
SF3B3-214ENST00000572365 CELA3BP08861 270 aa6.5□□□□□ -1.37
SF3B3-214ENST00000572365 GOLGA6DP0CG33 693 aa6.5□□□□□ -1.37
SF3B3-214ENST00000572365 C5AR1P21730 350 aa6.5□□□□□ -1.37
SF3B3-214ENST00000572365 CYP2C19P33261 490 aa6.5□□□□□ -1.37
SF3B3-214ENST00000572365 TBX4P57082 545 aa6.5□□□□□ -1.37
SF3B3-214ENST00000572365 GTF2H3Q13889 308 aa6.5□□□□□ -1.37
SF3B3-214ENST00000572365 SPIDRQ14159 915 aa6.5□□□□□ -1.37
SF3B3-214ENST00000572365 MLC1Q15049 377 aa6.5□□□□□ -1.37
SF3B3-214ENST00000572365 CCDC178Q5BJE1 867 aa6.5□□□□□ -1.37
SF3B3-214ENST00000572365 PHF19Q5T6S3 580 aa6.5□□□□□ -1.37
SF3B3-214ENST00000572365 MBNL2Q5VZF2 373 aaKnown RBP6.5□□□□□ -1.37
SF3B3-214ENST00000572365 APOBEC3HQ6NTF7 200 aaKnown RBP6.5□□□□□ -1.37
SF3B3-214ENST00000572365 CCDC129Q6ZRS4 1044 aa6.5□□□□□ -1.37
SF3B3-214ENST00000572365 BMP8AQ7Z5Y6 402 aa6.5□□□□□ -1.37
SF3B3-214ENST00000572365 C14orf80Q86SX3 495 aa6.5□□□□□ -1.37
SF3B3-214ENST00000572365 STK32CQ86UX6 486 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms