RNA–Protein interactions for RNA: ENST00000558655.5

ZEB1-212, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 2,773 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-212ENST00000558655 SETD4Q9NVD3 440 aa4.4□□□□□ -1.71
ZEB1-212ENST00000558655 UTP6Q9NYH9 597 aaKnown RBP4.4□□□□□ -1.71
ZEB1-212ENST00000558655 TBC1D7Q9P0N9 293 aa4.4□□□□□ -1.71
ZEB1-212ENST00000558655 SUCLA2Q9P2R7 463 aaPredicted RBP4.4□□□□□ -1.71
ZEB1-212ENST00000558655 RWDD2AQ9UIY3 292 aa4.4□□□□□ -1.71
ZEB1-212ENST00000558655 ZMYND8Q9ULU4 1186 aaPredicted RBP4.4□□□□□ -1.71
ZEB1-212ENST00000558655 TRAF3IP3Q9Y228 551 aa4.4□□□□□ -1.71
ZEB1-212ENST00000558655 TRPV2Q9Y5S1 764 aa4.4□□□□□ -1.71
ZEB1-212ENST00000558655 ADGRA3Q8IWK6 1321 aa4.39□□□□□ -1.71
ZEB1-212ENST00000558655 CNTNAP2Q9UHC6 1331 aa4.39□□□□□ -1.71
ZEB1-212ENST00000558655 A0A0U1RQJ8 604 aa4.39□□□□□ -1.71
ZEB1-212ENST00000558655 PDXKO00764 312 aa4.39□□□□□ -1.71
ZEB1-212ENST00000558655 DYNC1I1O14576 645 aa4.39□□□□□ -1.71
ZEB1-212ENST00000558655 ABLIM1O14639 778 aa4.39□□□□□ -1.71
ZEB1-212ENST00000558655 IKBKBO14920 756 aa4.39□□□□□ -1.71
ZEB1-212ENST00000558655 TLR3O15455 904 aaKnown RBP4.39□□□□□ -1.71
ZEB1-212ENST00000558655 ARHGAP6O43182 974 aa4.39□□□□□ -1.71
ZEB1-212ENST00000558655 TREHO43280 583 aa4.39□□□□□ -1.71
ZEB1-212ENST00000558655 IPO7O95373 1038 aaKnown RBP4.39□□□□□ -1.71
ZEB1-212ENST00000558655 ADRB2P07550 413 aa4.39□□□□□ -1.71
ZEB1-212ENST00000558655 CYP2C9P11712 490 aa4.39□□□□□ -1.71
ZEB1-212ENST00000558655 IDEP14735 1019 aa4.39□□□□□ -1.71
ZEB1-212ENST00000558655 MARK3P27448 753 aa4.39□□□□□ -1.71
ZEB1-212ENST00000558655 AXLP30530 894 aa4.39□□□□□ -1.71
ZEB1-212ENST00000558655 PHKA2P46019 1235 aa4.39□□□□□ -1.71
ZEB1-212ENST00000558655 MBTD1Q05BQ5 628 aa4.39□□□□□ -1.71
ZEB1-212ENST00000558655 LRRC63Q05C16 580 aa4.39□□□□□ -1.71
ZEB1-212ENST00000558655 DMP1Q13316 513 aaPredicted RBP4.39□□□□□ -1.71
ZEB1-212ENST00000558655 SLMAPQ14BN4 828 aa4.39□□□□□ -1.71
ZEB1-212ENST00000558655 NCAPHQ15003 741 aa4.39□□□□□ -1.71
ZEB1-212ENST00000558655 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.39□□□□□ -1.71
ZEB1-212ENST00000558655 RSPH3Q86UC2 560 aa4.39□□□□□ -1.71
ZEB1-212ENST00000558655 TTC13Q8NBP0 860 aa4.39□□□□□ -1.71
ZEB1-212ENST00000558655 NOC3LQ8WTT2 800 aaKnown RBP4.39□□□□□ -1.71
ZEB1-212ENST00000558655 SCFD1Q8WVM8 642 aa4.39□□□□□ -1.71
ZEB1-212ENST00000558655 PRPF31Q8WWY3 499 aaKnown RBP4.39□□□□□ -1.71
ZEB1-212ENST00000558655 MAP7D2Q96T17 732 aa4.39□□□□□ -1.71
ZEB1-212ENST00000558655 FAM167BQ9BTA0 163 aa4.39□□□□□ -1.71
ZEB1-212ENST00000558655 HSD3B7Q9H2F3 369 aa4.39□□□□□ -1.71
ZEB1-212ENST00000558655 EPC1Q9H2F5 836 aa4.39□□□□□ -1.71
ZEB1-212ENST00000558655 PDCL3Q9H2J4 239 aa4.39□□□□□ -1.71
ZEB1-212ENST00000558655 TMEM206Q9H813 350 aa4.39□□□□□ -1.71
ZEB1-212ENST00000558655 CYLDQ9NQC7 956 aa4.39□□□□□ -1.71
ZEB1-212ENST00000558655 DMAC2Q9NW81 257 aa4.39□□□□□ -1.71
ZEB1-212ENST00000558655 TBX21Q9UL17 535 aa4.39□□□□□ -1.71
ZEB1-212ENST00000558655 ZNF232Q9UNY5 417 aa4.39□□□□□ -1.71
ZEB1-212ENST00000558655 B4GALT4O60513 344 aa4.39□□□□□ -1.71
ZEB1-212ENST00000558655 CXCL10P02778 98 aa4.39□□□□□ -1.71
ZEB1-212ENST00000558655 HNRNPCP07910 306 aaKnown RBP eCLIP4.39□□□□□ -1.715e-6■□□□□ 10.6
ZEB1-212ENST00000558655 DARSP14868 501 aaKnown RBP4.39□□□□□ -1.71
ZEB1-212ENST00000558655 GARTP22102 1010 aa4.39□□□□□ -1.71
ZEB1-212ENST00000558655 CCNE1P24864 410 aa4.39□□□□□ -1.71
ZEB1-212ENST00000558655 SMTNP53814 917 aa4.39□□□□□ -1.71
ZEB1-212ENST00000558655 UBASH3AP57075 661 aa4.39□□□□□ -1.71
ZEB1-212ENST00000558655 ROR1Q01973 937 aa4.39□□□□□ -1.71
ZEB1-212ENST00000558655 DMTNQ08495 405 aa4.39□□□□□ -1.71
ZEB1-212ENST00000558655 STK4Q13043 487 aa4.39□□□□□ -1.71
ZEB1-212ENST00000558655 PAK2Q13177 524 aa4.39□□□□□ -1.71
ZEB1-212ENST00000558655 DRP2Q13474 957 aa4.39□□□□□ -1.71
ZEB1-212ENST00000558655 DSC3Q14574 896 aa4.39□□□□□ -1.71
ZEB1-212ENST00000558655 OCLNQ16625 522 aa4.39□□□□□ -1.71
ZEB1-212ENST00000558655 PTGISQ16647 500 aa4.39□□□□□ -1.71
ZEB1-212ENST00000558655 KYAT1Q16773 422 aa4.39□□□□□ -1.71
ZEB1-212ENST00000558655 FAM102BQ5T8I3 360 aa4.39□□□□□ -1.71
ZEB1-212ENST00000558655 TTI2Q6NXR4 508 aa4.39□□□□□ -1.71
ZEB1-212ENST00000558655 DYMQ7RTS9 669 aa4.39□□□□□ -1.71
ZEB1-212ENST00000558655 HAUS6Q7Z4H7 955 aa4.39□□□□□ -1.71
ZEB1-212ENST00000558655 MYOCDQ8IZQ8 938 aa4.39□□□□□ -1.71
ZEB1-212ENST00000558655 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.39□□□□□ -1.71
ZEB1-212ENST00000558655 GABPB2Q8TAK5 448 aaPredicted RBP4.39□□□□□ -1.71
ZEB1-212ENST00000558655 TRAPPC12Q8WVT3 735 aa4.39□□□□□ -1.71
ZEB1-212ENST00000558655 HNRNPLLQ8WVV9 542 aaKnown RBP4.39□□□□□ -1.71
ZEB1-212ENST00000558655 GIMAP1Q8WWP7 306 aa4.39□□□□□ -1.71
ZEB1-212ENST00000558655 ACCSQ96QU6 501 aa4.39□□□□□ -1.71
ZEB1-212ENST00000558655 MED15Q96RN5 788 aa4.39□□□□□ -1.71
ZEB1-212ENST00000558655 CELF4Q9BZC1 486 aaKnown RBP4.39□□□□□ -1.71
ZEB1-212ENST00000558655 GPRC5CQ9NQ84 441 aa4.39□□□□□ -1.71
ZEB1-212ENST00000558655 PRMT7Q9NVM4 692 aaPredicted RBP4.39□□□□□ -1.71
ZEB1-212ENST00000558655 CHCHD3Q9NX63 227 aaKnown RBP4.39□□□□□ -1.71
ZEB1-212ENST00000558655 FBXO10Q9UK96 956 aa4.39□□□□□ -1.71
ZEB1-212ENST00000558655 ANGPTL2Q9UKU9 493 aa4.39□□□□□ -1.71
ZEB1-212ENST00000558655 TBX20Q9UMR3 447 aa4.39□□□□□ -1.71
ZEB1-212ENST00000558655 EXOC7Q9UPT5 735 aa4.39□□□□□ -1.71
ZEB1-212ENST00000558655 MAPK8IP1Q9UQF2 711 aa4.39□□□□□ -1.71
ZEB1-212ENST00000558655 TTC3P53804 2025 aa4.39□□□□□ -1.71
ZEB1-212ENST00000558655 ACKR2O00590 384 aa4.38□□□□□ -1.71
ZEB1-212ENST00000558655 TOR1BO14657 336 aa4.38□□□□□ -1.71
ZEB1-212ENST00000558655 INPPL1O15357 1258 aa4.38□□□□□ -1.71
ZEB1-212ENST00000558655 SERPINC1P01008 464 aa4.38□□□□□ -1.71
ZEB1-212ENST00000558655 SSBP05455 408 aaKnown RBP eCLIP4.38□□□□□ -1.71
ZEB1-212ENST00000558655 RAC2P15153 192 aa4.38□□□□□ -1.71
ZEB1-212ENST00000558655 RPL17P18621 184 aaKnown RBP4.38□□□□□ -1.71
ZEB1-212ENST00000558655 PRCPP42785 496 aa4.38□□□□□ -1.71
ZEB1-212ENST00000558655 CLCN3P51790 818 aa4.38□□□□□ -1.71
ZEB1-212ENST00000558655 ADKP55263 362 aaKnown RBP4.38□□□□□ -1.71
ZEB1-212ENST00000558655 NCBP1Q09161 790 aaKnown RBP4.38□□□□□ -1.71
ZEB1-212ENST00000558655 C19orf57Q0VDD7 668 aa4.38□□□□□ -1.71
ZEB1-212ENST00000558655 BFSP2Q13515 415 aa4.38□□□□□ -1.71
ZEB1-212ENST00000558655 STIM1Q13586 685 aa4.38□□□□□ -1.71
ZEB1-212ENST00000558655 KNOP1Q1ED39 458 aaKnown RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms