RNA–Protein interactions for RNA: ENST00000556839.5

RALGAPA1-215, Transcript of Ral GTPase activating protein catalytic alpha subunit 1, human

TSL 3

Gene RALGAPA1, Length 1,305 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RALGAPA1-215	ENST00000556839	ATP11B	Q9Y2G3	1177 aa		6.08	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	PCDHGA9	Q9Y5G4	932 aa	Known RBP	6.08	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	PCDHGA8	Q9Y5G5	932 aa		6.08	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	PCDHGA7	Q9Y5G6	932 aa		6.08	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	PCDHGA6	Q9Y5G7	932 aa		6.08	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	PCDHGA3	Q9Y5H0	932 aa		6.08	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	PCDHGA2	Q9Y5H1	932 aa		6.08	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	SCIN	Q9Y6U3	715 aa		6.08	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	DDX49	Q9Y6V7	483 aa	Known RBP	6.08	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	NINL	Q9Y2I6	1382 aa		6.08	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	SMARCA2	P51531	1590 aa		6.08	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	MATN4	O95460	622 aa		6.07	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	IGHD	P01880	384 aa		6.07	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	CFI	P05156	583 aa		6.07	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	NBPF7	P0C2Y1	421 aa	Predicted RBP	6.07	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	MYBL2	P10244	700 aa		6.07	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	KCNA2	P16389	499 aa		6.07	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	LSS	P48449	732 aa		6.07	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	IL2	P60568	153 aa		6.07	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	NHLH1	Q02575	133 aa		6.07	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	PPARA	Q07869	468 aa		6.07	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	ZNF169	Q14929	603 aa	Predicted RBP	6.07	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	SPDYE7P	Q495Y7	208 aa		6.07	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	ATP13A4	Q4VNC1	1196 aa		6.07	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	C10orf62	Q5T681	223 aa	Predicted RBP	6.07	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	IQCF2	Q8IXL9	164 aa		6.07	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	TTC30B	Q8N4P2	665 aa		6.07	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	EFHB	Q8N7U6	833 aa		6.07	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	PDILT	Q8N807	584 aa		6.07	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	CLRN3	Q8NCR9	226 aa		6.07	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	VPS37A	Q8NEZ2	397 aa		6.07	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	TBC1D22A	Q8WUA7	517 aa		6.07	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	ZNF396	Q96N95	335 aa	Predicted RBP	6.07	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	SEZ6L	Q9BYH1	1024 aa		6.07	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	SLC29A3	Q9BZD2	475 aa		6.07	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	THG1L	Q9NWX6	298 aa	Known RBP	6.07	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	MAP3K20	Q9NYL2	800 aa	Known RBP	6.07	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	SMARCA4	P51532	1647 aa		6.07	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	DYNC1I1	O14576	645 aa		6.06	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	TGM5	O43548	720 aa		6.06	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	ITGA10	O75578	1167 aa		6.06	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	LTA4H	P09960	611 aa	Known RBP	6.06	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	PF4V1	P10720	104 aa		6.06	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	LPO	P22079	712 aa	Predicted RBP	6.06	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	MAN1A1	P33908	653 aa		6.06	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	GTF2A1	P52655	376 aa	Predicted RBP	6.06	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	SIM1	P81133	766 aa	Predicted RBP	6.06	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	DCTN1	Q14203	1278 aa		6.06	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	BMT2	Q1RMZ1	405 aa		6.06	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	CMIP	Q8IY22	773 aa		6.06	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	MIGA1	Q8NAN2	632 aa		6.06	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	C1orf162	Q8NEQ5	155 aa	Predicted RBP	6.06	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	MDM1	Q8TC05	714 aa		6.06	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	FBXO41	Q8TF61	875 aa		6.06	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	SCARB1	Q8WTV0	552 aa		6.06	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	FAXDC2	Q96IV6	333 aa		6.06	□□□□□ -1.44
RALGAPA1-215	ENST00000556839		Q96MF0	132 aa		6.06	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	NEU1	Q99519	415 aa		6.06	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	SLX1A	Q9BQ83	275 aa		6.06	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	SARG	Q9BW04	601 aa		6.06	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	SEMA4G	Q9NTN9	838 aa		6.06	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	DDX20	Q9UHI6	824 aa	Known RBP	6.06	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	TAGLN3	Q9UI15	199 aa		6.06	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	SALL3	Q9BXA9	1300 aa		6.06	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	DNAJC9-AS1	A6NH13	148 aa		6.05	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	TPPP	O94811	219 aa		6.05	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	ATIC	P31939	592 aa		6.05	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	ABCG1	P45844	678 aa		6.05	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	KCNJ4	P48050	445 aa		6.05	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	RGS19	P49795	217 aa		6.05	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	RIPK4	P57078	832 aa		6.05	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	KLF1	Q13351	362 aa	Predicted RBP	6.05	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	GRM3	Q14832	879 aa		6.05	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	TMEM240	Q5SV17	173 aa		6.05	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	IL31	Q6EBC2	164 aa		6.05	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	PDZD4	Q76G19	769 aa	Predicted RBP	6.05	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	GPR149	Q86SP6	731 aa		6.05	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	PJA1	Q8NG27	643 aa		6.05	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	SMCR8	Q8TEV9	937 aa	Predicted RBP	6.05	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	CCDC47	Q96A33	483 aa	Known RBP	6.05	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	ZNF496	Q96IT1	587 aa	Predicted RBP	6.05	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	PHACTR3	Q96KR7	559 aa		6.05	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	MMTAG2	Q9BU76	263 aa	Known RBP	6.05	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	CALCOCO1	Q9P1Z2	691 aa		6.05	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	PNMA8B	Q9ULN7	279 aa	Predicted RBP	6.05	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	NOX1	Q9Y5S8	564 aa		6.05	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	APAF1	O14727	1248 aa		6.04	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	HSP90AB1	P08238	724 aa	Known RBP	6.04	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	CTGF	P29279	349 aa		6.04	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	SERPINB3	P29508	390 aa		6.04	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	NEK3	P51956	506 aa		6.04	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	CHN2	P52757	468 aa		6.04	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	MEF2A	Q02078	507 aa	Predicted RBP	6.04	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	SCAP	Q12770	1279 aa		6.04	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	GBX1	Q14549	363 aa		6.04	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	BRD3	Q15059	726 aa		6.04	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	ZSCAN26	Q16670	478 aa		6.04	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	FILIP1L	Q4L180	1135 aa		6.04	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	METRNL	Q641Q3	311 aa		6.04	□□□□□ -1.44
RALGAPA1-215	ENST00000556839	C16orf87	Q6PH81	154 aa		6.04	□□□□□ -1.44

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