RNA–Protein interactions for RNA: ENST00000544060.1

TDG-208, Transcript of thymine DNA glycosylase, humanhuman

TSL 1 (best)

Gene TDG, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDG-208ENST00000544060 GALR2O43603 387 aaPredicted RBP20.28■□□□□ 0.84
TDG-208ENST00000544060 CEBPBP17676 345 aa20.28■□□□□ 0.84
TDG-208ENST00000544060 TFAMQ00059 246 aaKnown RBP20.28■□□□□ 0.84
TDG-208ENST00000544060 PKP1Q13835 747 aa20.28■□□□□ 0.84
TDG-208ENST00000544060 MYBPC2Q14324 1141 aa20.28■□□□□ 0.84
TDG-208ENST00000544060 CYP4A22Q5TCH4 519 aa20.28■□□□□ 0.84
TDG-208ENST00000544060 ALYREFQ86V81 257 aaKnown RBP20.28■□□□□ 0.84
TDG-208ENST00000544060 BRSK2Q8IWQ3 736 aa20.28■□□□□ 0.84
TDG-208ENST00000544060 EFCAB13Q8IY85 973 aa20.28■□□□□ 0.84
TDG-208ENST00000544060 ZNF560Q96MR9 790 aa20.28■□□□□ 0.84
TDG-208ENST00000544060 KXD1Q9BQD3 176 aa20.28■□□□□ 0.84
TDG-208ENST00000544060 RTP3Q9BQQ7 232 aa20.28■□□□□ 0.84
TDG-208ENST00000544060 PYM1Q9BRP8 204 aaKnown RBP20.28■□□□□ 0.84
TDG-208ENST00000544060 CBWD1Q9BRT8 395 aa20.28■□□□□ 0.84
TDG-208ENST00000544060 RPP25Q9BUL9 199 aaKnown RBP20.28■□□□□ 0.84
TDG-208ENST00000544060 MAGEF1Q9HAY2 307 aa20.28■□□□□ 0.84
TDG-208ENST00000544060 SLC2A4RGQ9NR83 387 aa20.28■□□□□ 0.84
TDG-208ENST00000544060 YIPF1Q9Y548 306 aa20.28■□□□□ 0.84
TDG-208ENST00000544060 KRBA1A5PL33 1030 aa20.27■□□□□ 0.84
TDG-208ENST00000544060 GOLGA8IPA6NC78 632 aa20.27■□□□□ 0.84
TDG-208ENST00000544060 GOLGA8JA6NMD2 632 aa20.27■□□□□ 0.84
TDG-208ENST00000544060 CYB561D2O14569 222 aa20.27■□□□□ 0.84
TDG-208ENST00000544060 POLR2DO15514 142 aaKnown RBP20.27■□□□□ 0.84
TDG-208ENST00000544060 EXTL3O43909 919 aa20.27■□□□□ 0.84
TDG-208ENST00000544060 NPR3P17342 541 aa20.27■□□□□ 0.84
TDG-208ENST00000544060 AOC1P19801 751 aa20.27■□□□□ 0.84
TDG-208ENST00000544060 GPR17Q13304 367 aa20.27■□□□□ 0.84
TDG-208ENST00000544060 SV2CQ496J9 727 aa20.27■□□□□ 0.84
TDG-208ENST00000544060 ZSWIM2Q8NEG5 633 aa20.27■□□□□ 0.84
TDG-208ENST00000544060 CACTINQ8WUQ7 758 aaKnown RBP20.27■□□□□ 0.84
TDG-208ENST00000544060 HPS3Q969F9 1004 aa20.27■□□□□ 0.84
TDG-208ENST00000544060 PCIF1Q9H4Z3 704 aa20.27■□□□□ 0.84
TDG-208ENST00000544060 ASAH2Q9NR71 780 aa20.27■□□□□ 0.84
TDG-208ENST00000544060 ARHGEF3Q9NR81 526 aa20.27■□□□□ 0.84
TDG-208ENST00000544060 PCDHA7Q9UN72 937 aa20.27■□□□□ 0.84
TDG-208ENST00000544060 TCHHQ07283 1943 aa20.26■□□□□ 0.83
TDG-208ENST00000544060 KIAA0391O15091 583 aaKnown RBP20.26■□□□□ 0.83
TDG-208ENST00000544060 CYP11A1P05108 521 aa20.26■□□□□ 0.83
TDG-208ENST00000544060 MYL4P12829 197 aa20.26■□□□□ 0.83
TDG-208ENST00000544060 PNPLA4P41247 253 aa20.26■□□□□ 0.83
TDG-208ENST00000544060 ALDH1A3P47895 512 aa20.26■□□□□ 0.83
TDG-208ENST00000544060 DNM1Q05193 864 aaKnown RBP20.26■□□□□ 0.83
TDG-208ENST00000544060 DUSP4Q13115 394 aa20.26■□□□□ 0.83
TDG-208ENST00000544060 PRSS36Q5K4E3 855 aa20.26■□□□□ 0.83
TDG-208ENST00000544060 THEM5Q8N1Q8 247 aa20.26■□□□□ 0.83
TDG-208ENST00000544060 GPD1LQ8N335 351 aa20.26■□□□□ 0.83
TDG-208ENST00000544060 LEMD2Q8NC56 503 aa20.26■□□□□ 0.83
TDG-208ENST00000544060 ATOH1Q92858 354 aaPredicted RBP20.26■□□□□ 0.83
TDG-208ENST00000544060 TCEAL4Q96EI5 215 aa20.26■□□□□ 0.83
TDG-208ENST00000544060 TBC1D17Q9HA65 648 aa20.26■□□□□ 0.83
TDG-208ENST00000544060 CEP72Q9P209 647 aa20.26■□□□□ 0.83
TDG-208ENST00000544060 MTMR11A4FU01 709 aa20.25■□□□□ 0.83
TDG-208ENST00000544060 H0Y858 1186 aa20.25■□□□□ 0.83
TDG-208ENST00000544060 MRE11P49959 708 aa20.25■□□□□ 0.83
TDG-208ENST00000544060 EPHB3P54753 998 aa20.25■□□□□ 0.83
TDG-208ENST00000544060 GPC5P78333 572 aa20.25■□□□□ 0.83
TDG-208ENST00000544060 FAM26FQ5R3K3 315 aa20.25■□□□□ 0.83
TDG-208ENST00000544060 RESP18Q5W5W9 173 aa20.25■□□□□ 0.83
TDG-208ENST00000544060 HS6ST3Q8IZP7 471 aa20.25■□□□□ 0.83
TDG-208ENST00000544060 GLIS3Q8NEA6 775 aa20.25■□□□□ 0.83
TDG-208ENST00000544060 TMEM209Q96SK2 561 aa20.25■□□□□ 0.83
TDG-208ENST00000544060 C7orf25Q9BPX7 421 aa20.25■□□□□ 0.83
TDG-208ENST00000544060 SCN1AP35498 2009 aa20.25■□□□□ 0.83
TDG-208ENST00000544060 KPNA7A9QM74 516 aa20.24■□□□□ 0.83
TDG-208ENST00000544060 EIF3DO15371 548 aaKnown RBP eCLIP20.24■□□□□ 0.83
TDG-208ENST00000544060 PI15O43692 258 aa20.24■□□□□ 0.83
TDG-208ENST00000544060 ECI2O75521 394 aa20.24■□□□□ 0.83
TDG-208ENST00000544060 MICAL2O94851 1124 aa20.24■□□□□ 0.83
TDG-208ENST00000544060 VNN2O95498 520 aa20.24■□□□□ 0.83
TDG-208ENST00000544060 ITGB3P05106 788 aa20.24■□□□□ 0.83
TDG-208ENST00000544060 TMEM191BP0C7N4 346 aa20.24■□□□□ 0.83
TDG-208ENST00000544060 POLR2BP30876 1174 aaKnown RBP20.24■□□□□ 0.83
TDG-208ENST00000544060 WNT7BP56706 349 aa20.24■□□□□ 0.83
TDG-208ENST00000544060 PFKPQ01813 784 aa20.24■□□□□ 0.83
TDG-208ENST00000544060 CENPPQ6IPU0 288 aa20.24■□□□□ 0.83
TDG-208ENST00000544060 CNNM4Q6P4Q7 775 aa20.24■□□□□ 0.83
TDG-208ENST00000544060 CEP57L1Q8IYX8 460 aa20.24■□□□□ 0.83
TDG-208ENST00000544060 OR10T2Q8NGX3 314 aa20.24■□□□□ 0.83
TDG-208ENST00000544060 SHDQ96IW2 340 aa20.24■□□□□ 0.83
TDG-208ENST00000544060 CRISPLD1Q9H336 500 aa20.24■□□□□ 0.83
TDG-208ENST00000544060 FAM86C1Q9NVL1 165 aa20.24■□□□□ 0.83
TDG-208ENST00000544060 AGAP1Q9UPQ3 857 aa20.24■□□□□ 0.83
TDG-208ENST00000544060 SLC27A5Q9Y2P5 690 aa20.24■□□□□ 0.83
TDG-208ENST00000544060 R3HCC1Q9Y3T6 440 aaKnown RBP20.24■□□□□ 0.83
TDG-208ENST00000544060 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.23■□□□□ 0.83
TDG-208ENST00000544060 CCR2P41597 374 aa20.23■□□□□ 0.83
TDG-208ENST00000544060 SLC39A12Q504Y0 691 aa20.23■□□□□ 0.83
TDG-208ENST00000544060 WSCD1Q658N2 575 aa20.23■□□□□ 0.83
TDG-208ENST00000544060 UNC13DQ70J99 1090 aa20.23■□□□□ 0.83
TDG-208ENST00000544060 C1orf127Q8N9H9 656 aa20.23■□□□□ 0.83
TDG-208ENST00000544060 ATAD1Q8NBU5 361 aa20.23■□□□□ 0.83
TDG-208ENST00000544060 BLZF1Q9H2G9 400 aa20.23■□□□□ 0.83
TDG-208ENST00000544060 PDE11AQ9HCR9 933 aa20.23■□□□□ 0.83
TDG-208ENST00000544060 ITGA11Q9UKX5 1188 aa20.23■□□□□ 0.83
TDG-208ENST00000544060 ZNF233A6NK53 670 aa20.22■□□□□ 0.83
TDG-208ENST00000544060 KRT19P08727 400 aa20.22■□□□□ 0.83
TDG-208ENST00000544060 AFMP43652 599 aa20.22■□□□□ 0.83
TDG-208ENST00000544060 EPHA5P54756 1037 aa20.22■□□□□ 0.83
TDG-208ENST00000544060 BFSP1Q12934 665 aa20.22■□□□□ 0.83
TDG-208ENST00000544060 SURF1Q15526 300 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms