RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 SOAT2O75908 522 aa15.26■□□□□ 0.03
SMARCA4-206ENST00000538456 PAPSS2O95340 614 aaPredicted RBP15.26■□□□□ 0.03
SMARCA4-206ENST00000538456 MATR3P43243 847 aaKnown RBP eCLIP15.26■□□□□ 0.031e-6■■■■■ 30.1
SMARCA4-206ENST00000538456 NEK4P51957 841 aa15.26■□□□□ 0.03
SMARCA4-206ENST00000538456 MLLT6P55198 1093 aaPredicted RBP15.26■□□□□ 0.03
SMARCA4-206ENST00000538456 RAD51AP2Q09MP3 1159 aa15.26■□□□□ 0.03
SMARCA4-206ENST00000538456 STRN3Q13033 797 aa15.26■□□□□ 0.03
SMARCA4-206ENST00000538456 MAPK7Q13164 816 aa15.26■□□□□ 0.03
SMARCA4-206ENST00000538456 SF3A2Q15428 464 aaKnown RBP15.26■□□□□ 0.03
SMARCA4-206ENST00000538456 AASDHQ4L235 1098 aaPredicted RBP15.26■□□□□ 0.03
SMARCA4-206ENST00000538456 DGKKQ5KSL6 1271 aa15.26■□□□□ 0.03
SMARCA4-206ENST00000538456 IL31Q6EBC2 164 aa15.26■□□□□ 0.03
SMARCA4-206ENST00000538456 USP37Q86T82 979 aa15.26■□□□□ 0.03
SMARCA4-206ENST00000538456 RALGPS2Q86X27 583 aaPredicted RBP15.26■□□□□ 0.03
SMARCA4-206ENST00000538456 TTC9BQ8N6N2 239 aa15.26■□□□□ 0.03
SMARCA4-206ENST00000538456 BEST2Q8NFU1 509 aa15.26■□□□□ 0.03
SMARCA4-206ENST00000538456 LRRC3BQ96PB8 259 aa15.26■□□□□ 0.03
SMARCA4-206ENST00000538456 FOXP1Q9H334 677 aaPredicted RBP15.26■□□□□ 0.03
SMARCA4-206ENST00000538456 DNM3Q9UQ16 869 aa15.26■□□□□ 0.03
SMARCA4-206ENST00000538456 CEP295Q9C0D2 2601 aa15.25■□□□□ 0.03
SMARCA4-206ENST00000538456 TSC2P49815 1807 aa15.25■□□□□ 0.03
SMARCA4-206ENST00000538456 MYBPHLA2RUH7 354 aa15.25■□□□□ 0.03
SMARCA4-206ENST00000538456 M0QZQ0 153 aa15.25■□□□□ 0.03
SMARCA4-206ENST00000538456 AXIN1O15169 862 aa15.25■□□□□ 0.03
SMARCA4-206ENST00000538456 OAZ2O95190 189 aa15.25■□□□□ 0.03
SMARCA4-206ENST00000538456 ALDH1A3P47895 512 aa15.25■□□□□ 0.03
SMARCA4-206ENST00000538456 PXNP49023 591 aaPredicted RBP15.25■□□□□ 0.03
SMARCA4-206ENST00000538456 GUCY2FP51841 1108 aa15.25■□□□□ 0.03
SMARCA4-206ENST00000538456 CDR1P51861 262 aa15.25■□□□□ 0.03
SMARCA4-206ENST00000538456 TNK2Q07912 1038 aa15.25■□□□□ 0.03
SMARCA4-206ENST00000538456 GPR158Q5T848 1215 aa15.25■□□□□ 0.03
SMARCA4-206ENST00000538456 GAREM2Q75VX8 874 aa15.25■□□□□ 0.03
SMARCA4-206ENST00000538456 HAUS6Q7Z4H7 955 aa15.25■□□□□ 0.03
SMARCA4-206ENST00000538456 C4orf32Q8N8J7 132 aa15.25■□□□□ 0.03
SMARCA4-206ENST00000538456 C12orf50Q8NA57 414 aaPredicted RBP15.25■□□□□ 0.03
SMARCA4-206ENST00000538456 KIF12Q96FN5 646 aa15.25■□□□□ 0.03
SMARCA4-206ENST00000538456 ATXN3LQ9H3M9 355 aa15.25■□□□□ 0.03
SMARCA4-206ENST00000538456 FRYQ5TBA9 3013 aa15.24■□□□□ 0.03
SMARCA4-206ENST00000538456 CLDN3O15551 220 aa15.24■□□□□ 0.03
SMARCA4-206ENST00000538456 EXTL3O43909 919 aa15.24■□□□□ 0.03
SMARCA4-206ENST00000538456 FOXD2O60548 495 aaPredicted RBP15.24■□□□□ 0.03
SMARCA4-206ENST00000538456 PRAMEF12O95522 483 aa15.24■□□□□ 0.03
SMARCA4-206ENST00000538456 GABRR2P28476 465 aa15.24■□□□□ 0.03
SMARCA4-206ENST00000538456 CDC25AP30304 524 aa15.24■□□□□ 0.03
SMARCA4-206ENST00000538456 CCINQ13939 588 aa15.24■□□□□ 0.03
SMARCA4-206ENST00000538456 ZRSR1Q15695 479 aaKnown RBP15.24■□□□□ 0.03
SMARCA4-206ENST00000538456 ARHGAP29Q52LW3 1261 aa15.24■□□□□ 0.03
SMARCA4-206ENST00000538456 RINT1Q6NUQ1 792 aa15.24■□□□□ 0.03
SMARCA4-206ENST00000538456 DSTYKQ6XUX3 929 aa15.24■□□□□ 0.03
SMARCA4-206ENST00000538456 C1orf186Q6ZWK4 172 aa15.24■□□□□ 0.03
SMARCA4-206ENST00000538456 KCNK18Q7Z418 384 aa15.24■□□□□ 0.03
SMARCA4-206ENST00000538456 DNAJB7Q7Z6W7 309 aaPredicted RBP15.24■□□□□ 0.03
SMARCA4-206ENST00000538456 WDR5BQ86VZ2 330 aa15.24■□□□□ 0.03
SMARCA4-206ENST00000538456 CCDC83Q8IWF9 413 aa15.24■□□□□ 0.03
SMARCA4-206ENST00000538456 IGSF22Q8N9C0 903 aa15.24■□□□□ 0.03
SMARCA4-206ENST00000538456 ATAD1Q8NBU5 361 aa15.24■□□□□ 0.03
SMARCA4-206ENST00000538456 DDX1Q92499 740 aaKnown RBP15.24■□□□□ 0.03
SMARCA4-206ENST00000538456 MKNK1Q9BUB5 465 aa15.24■□□□□ 0.03
SMARCA4-206ENST00000538456 RAB34Q9BZG1 259 aa15.24■□□□□ 0.03
SMARCA4-206ENST00000538456 ARRDC1-AS1Q9H2J1 176 aa15.24■□□□□ 0.03
SMARCA4-206ENST00000538456 ANGPTL2Q9UKU9 493 aa15.24■□□□□ 0.03
SMARCA4-206ENST00000538456 NOL7Q9UMY1 257 aaKnown RBP15.24■□□□□ 0.03
SMARCA4-206ENST00000538456 LAMA1P25391 3075 aa15.24■□□□□ 0.03
SMARCA4-206ENST00000538456 EML5Q05BV3 1969 aa15.24■□□□□ 0.03
SMARCA4-206ENST00000538456 MTMR11A4FU01 709 aa15.23■□□□□ 0.03
SMARCA4-206ENST00000538456 OR6C75A6NL08 312 aa15.23■□□□□ 0.03
SMARCA4-206ENST00000538456 LRPAP1P30533 357 aa15.23■□□□□ 0.03
SMARCA4-206ENST00000538456 TNFSF9P41273 254 aa15.23■□□□□ 0.03
SMARCA4-206ENST00000538456 CYP4F8P98187 520 aa15.23■□□□□ 0.03
SMARCA4-206ENST00000538456 GPR17Q13304 367 aa15.23■□□□□ 0.03
SMARCA4-206ENST00000538456 PDIA5Q14554 519 aa15.23■□□□□ 0.03
SMARCA4-206ENST00000538456 ARHGAP15Q53QZ3 475 aa15.23■□□□□ 0.03
SMARCA4-206ENST00000538456 KRT79Q5XKE5 535 aa15.23■□□□□ 0.03
SMARCA4-206ENST00000538456 OVOS1Q6IE37 1185 aa15.23■□□□□ 0.03
SMARCA4-206ENST00000538456 CENPPQ6IPU0 288 aa15.23■□□□□ 0.03
SMARCA4-206ENST00000538456 PKN3Q6P5Z2 889 aa15.23■□□□□ 0.03
SMARCA4-206ENST00000538456 TMEM161BQ8NDZ6 487 aa15.23■□□□□ 0.03
SMARCA4-206ENST00000538456 PSMG2Q969U7 264 aa15.23■□□□□ 0.03
SMARCA4-206ENST00000538456 BICD1Q96G01 975 aa15.23■□□□□ 0.03
SMARCA4-206ENST00000538456 TMEM209Q96SK2 561 aa15.23■□□□□ 0.03
SMARCA4-206ENST00000538456 LPIN3Q9BQK8 851 aa15.23■□□□□ 0.03
SMARCA4-206ENST00000538456 OXCT2Q9BYC2 517 aaPredicted RBP15.23■□□□□ 0.03
SMARCA4-206ENST00000538456 HAPLN2Q9GZV7 340 aa15.23■□□□□ 0.03
SMARCA4-206ENST00000538456 SMG9Q9H0W8 520 aaKnown RBP15.23■□□□□ 0.03
SMARCA4-206ENST00000538456 C17orf75Q9HAS0 396 aa15.23■□□□□ 0.03
SMARCA4-206ENST00000538456 RXFP3Q9NSD7 469 aa15.23■□□□□ 0.03
SMARCA4-206ENST00000538456 STK24Q9Y6E0 443 aa15.23■□□□□ 0.03
SMARCA4-206ENST00000538456 ZNF638Q14966 1978 aaKnown RBP15.23■□□□□ 0.03
SMARCA4-206ENST00000538456 TTC26A0AVF1 554 aa15.22■□□□□ 0.03
SMARCA4-206ENST00000538456 PPEF2O14830 753 aa15.22■□□□□ 0.03
SMARCA4-206ENST00000538456 RPP40O75818 363 aaKnown RBP15.22■□□□□ 0.03
SMARCA4-206ENST00000538456 CLTAP09496 248 aa15.22■□□□□ 0.03
SMARCA4-206ENST00000538456 MAPTP10636 758 aaKnown RBP15.22■□□□□ 0.03
SMARCA4-206ENST00000538456 TRAPPC10P48553 1259 aa15.22■□□□□ 0.03
SMARCA4-206ENST00000538456 AARSP49588 968 aaKnown RBP eCLIP15.22■□□□□ 0.03
SMARCA4-206ENST00000538456 SMTNP53814 917 aa15.22■□□□□ 0.03
SMARCA4-206ENST00000538456 PPP2R3AQ06190 1150 aa15.22■□□□□ 0.03
SMARCA4-206ENST00000538456 MCL1Q07820 350 aa15.22■□□□□ 0.03
SMARCA4-206ENST00000538456 N4BP2L1Q5TBK1 243 aaPredicted RBP15.22■□□□□ 0.03
SMARCA4-206ENST00000538456 ZPBP2Q6X784 338 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms