RNA–Protein interactions for RNA: ENST00000520828.5

PTK2-223, Transcript of protein tyrosine kinase 2, humanhuman

TSL 4

Gene PTK2, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2-223ENST00000520828 PIGOQ8TEQ8 1089 aa8.84□□□□□ -0.99
PTK2-223ENST00000520828 JAKMIP1Q96N16 626 aaKnown RBP8.84□□□□□ -0.99
PTK2-223ENST00000520828 LRRC3BQ96PB8 259 aa8.84□□□□□ -0.99
PTK2-223ENST00000520828 HHIPQ96QV1 700 aa8.84□□□□□ -0.99
PTK2-223ENST00000520828 HSD17B14Q9BPX1 270 aa8.84□□□□□ -0.99
PTK2-223ENST00000520828 TOPORSQ9NS56 1045 aaPredicted RBP8.84□□□□□ -0.99
PTK2-223ENST00000520828 USP20Q9Y2K6 914 aa8.84□□□□□ -0.99
PTK2-223ENST00000520828 CPLX1O14810 134 aa8.83□□□□□ -1
PTK2-223ENST00000520828 DCLK1O15075 740 aa8.83□□□□□ -1
PTK2-223ENST00000520828 RNF40O75150 1001 aa8.83□□□□□ -1
PTK2-223ENST00000520828 APBB3O95704 486 aa8.83□□□□□ -1
PTK2-223ENST00000520828 FGF19O95750 216 aa8.83□□□□□ -1
PTK2-223ENST00000520828 XRCC6P12956 609 aaKnown RBP eCLIP8.83□□□□□ -19e-7■■■■■ 34.5
PTK2-223ENST00000520828 ATP2B1P20020 1258 aa8.83□□□□□ -1
PTK2-223ENST00000520828 PDIA3P30101 505 aaKnown RBP8.83□□□□□ -1
PTK2-223ENST00000520828 RPL9P32969 192 aaKnown RBP8.83□□□□□ -1
PTK2-223ENST00000520828 MCM4P33991 863 aa8.83□□□□□ -1
PTK2-223ENST00000520828 RDXP35241 583 aaKnown RBP8.83□□□□□ -1
PTK2-223ENST00000520828 ALDH1A3P47895 512 aa8.83□□□□□ -1
PTK2-223ENST00000520828 MCM2P49736 904 aa8.83□□□□□ -1
PTK2-223ENST00000520828 EMP3P54852 163 aa8.83□□□□□ -1
PTK2-223ENST00000520828 AMPD2Q01433 879 aa8.83□□□□□ -1
PTK2-223ENST00000520828 SOX4Q06945 474 aaPredicted RBP8.83□□□□□ -1
PTK2-223ENST00000520828 SOWAHCQ53LP3 525 aaPredicted RBP8.83□□□□□ -1
PTK2-223ENST00000520828 GPR158Q5T848 1215 aa8.83□□□□□ -1
PTK2-223ENST00000520828 FSTL4Q6MZW2 842 aa8.83□□□□□ -1
PTK2-223ENST00000520828 CYP2U1Q7Z449 544 aa8.83□□□□□ -1
PTK2-223ENST00000520828 PDZD3Q86UT5 571 aa8.83□□□□□ -1
PTK2-223ENST00000520828 C11orf74Q86VG3 221 aa8.83□□□□□ -1
PTK2-223ENST00000520828 FBXL16Q8N461 479 aa8.83□□□□□ -1
PTK2-223ENST00000520828 RNF25Q96BH1 459 aaPredicted RBP8.83□□□□□ -1
PTK2-223ENST00000520828 LRRC3Q9BY71 257 aa8.83□□□□□ -1
PTK2-223ENST00000520828 CCDC113Q9H0I3 377 aa8.83□□□□□ -1
PTK2-223ENST00000520828 ATXN3LQ9H3M9 355 aa8.83□□□□□ -1
PTK2-223ENST00000520828 KLK13Q9UKR3 277 aa8.83□□□□□ -1
PTK2-223ENST00000520828 KCNJ14Q9UNX9 436 aa8.83□□□□□ -1
PTK2-223ENST00000520828 A0A087WWV3 80 aa8.82□□□□□ -1
PTK2-223ENST00000520828 EIF4E1BA6NMX2 242 aaKnown RBP8.82□□□□□ -1
PTK2-223ENST00000520828 H0Y626 953 aa8.82□□□□□ -1
PTK2-223ENST00000520828 CDX4O14627 284 aaPredicted RBP8.82□□□□□ -1
PTK2-223ENST00000520828 TRDMT1O14717 391 aaKnown RBP8.82□□□□□ -1
PTK2-223ENST00000520828 RIOK3O14730 519 aaKnown RBP8.82□□□□□ -1
PTK2-223ENST00000520828 TRIM16O95361 564 aa8.82□□□□□ -1
PTK2-223ENST00000520828 PRAMEF12O95522 483 aa8.82□□□□□ -1
PTK2-223ENST00000520828 EGFP01133 1207 aa8.82□□□□□ -1
PTK2-223ENST00000520828 EDN1P05305 212 aa8.82□□□□□ -1
PTK2-223ENST00000520828 DRD1P21728 446 aa8.82□□□□□ -1
PTK2-223ENST00000520828 RPS6KB1P23443 525 aa8.82□□□□□ -1
PTK2-223ENST00000520828 MARCKSP29966 332 aaPredicted RBP8.82□□□□□ -1
PTK2-223ENST00000520828 WEE1P30291 646 aa8.82□□□□□ -1
PTK2-223ENST00000520828 GRM5P41594 1212 aa8.82□□□□□ -1
PTK2-223ENST00000520828 NAMPTP43490 491 aa8.82□□□□□ -1
PTK2-223ENST00000520828 LMAN2Q12907 356 aa8.82□□□□□ -1
PTK2-223ENST00000520828 DUSP4Q13115 394 aa8.82□□□□□ -1
PTK2-223ENST00000520828 PPP2R5AQ15172 486 aa8.82□□□□□ -1
PTK2-223ENST00000520828 USP39Q53GS9 565 aaKnown RBP8.82□□□□□ -1
PTK2-223ENST00000520828 ATF7IP2Q5U623 682 aa8.82□□□□□ -1
PTK2-223ENST00000520828 PMS2CLQ68D20 193 aa8.82□□□□□ -1
PTK2-223ENST00000520828 C19orf48Q6RUI8 117 aa8.82□□□□□ -1
PTK2-223ENST00000520828 PIK3AP1Q6ZUJ8 805 aa8.82□□□□□ -1
PTK2-223ENST00000520828 PROSER1Q86XN7 944 aa8.82□□□□□ -1
PTK2-223ENST00000520828 DDX12PQ92771 950 aa8.82□□□□□ -1
PTK2-223ENST00000520828 EXOC4Q96A65 974 aa8.82□□□□□ -1
PTK2-223ENST00000520828 SUSD3Q96L08 255 aa8.82□□□□□ -1
PTK2-223ENST00000520828 AIFM3Q96NN9 605 aa8.82□□□□□ -1
PTK2-223ENST00000520828 MKNK1Q9BUB5 465 aa8.82□□□□□ -1
PTK2-223ENST00000520828 CCDC94Q9BW85 323 aaPredicted RBP8.82□□□□□ -1
PTK2-223ENST00000520828 OXCT2Q9BYC2 517 aaPredicted RBP8.82□□□□□ -1
PTK2-223ENST00000520828 DNAJC25Q9H1X3 360 aa8.82□□□□□ -1
PTK2-223ENST00000520828 GKN1Q9NS71 199 aa8.82□□□□□ -1
PTK2-223ENST00000520828 POLR3BQ9NW08 1133 aaPredicted RBP8.82□□□□□ -1
PTK2-223ENST00000520828 ANKFY1Q9P2R3 1169 aa8.82□□□□□ -1
PTK2-223ENST00000520828 EBF1Q9UH73 591 aa8.82□□□□□ -1
PTK2-223ENST00000520828 PCDHA12Q9UN75 941 aa8.82□□□□□ -1
PTK2-223ENST00000520828 GPSM3Q9Y4H4 160 aa8.82□□□□□ -1
PTK2-223ENST00000520828 ASB3Q9Y575 518 aa8.82□□□□□ -1
PTK2-223ENST00000520828 SDK1Q7Z5N4 2213 aa8.81□□□□□ -1
PTK2-223ENST00000520828 SPAARA0A1B0GVQ0 90 aa8.81□□□□□ -1
PTK2-223ENST00000520828 PATE3B3GLJ2 98 aa8.81□□□□□ -1
PTK2-223ENST00000520828 MEFVO15553 781 aaPredicted RBP8.81□□□□□ -1
PTK2-223ENST00000520828 ZIC2O95409 532 aaPredicted RBP8.81□□□□□ -1
PTK2-223ENST00000520828 KCNE1P15382 129 aa8.81□□□□□ -1
PTK2-223ENST00000520828 GABRR2P28476 465 aa8.81□□□□□ -1
PTK2-223ENST00000520828 DGKEP52429 567 aa8.81□□□□□ -1
PTK2-223ENST00000520828 EFNA5P52803 228 aa8.81□□□□□ -1
PTK2-223ENST00000520828 EVCP57679 992 aa8.81□□□□□ -1
PTK2-223ENST00000520828 OSTNP61366 133 aa8.81□□□□□ -1
PTK2-223ENST00000520828 SIM1P81133 766 aaPredicted RBP8.81□□□□□ -1
PTK2-223ENST00000520828 RUNX3Q13761 415 aa8.81□□□□□ -1
PTK2-223ENST00000520828 DMC1Q14565 340 aa8.81□□□□□ -1
PTK2-223ENST00000520828 CALCRLQ16602 461 aa8.81□□□□□ -1
PTK2-223ENST00000520828 FBXO43Q4G163 708 aa8.81□□□□□ -1
PTK2-223ENST00000520828 XKR4Q5GH76 650 aa8.81□□□□□ -1
PTK2-223ENST00000520828 NT5DC1Q5TFE4 455 aa8.81□□□□□ -1
PTK2-223ENST00000520828 CPLX2Q6PUV4 134 aaKnown RBP8.81□□□□□ -1
PTK2-223ENST00000520828 ALKAL1Q6UXT8 129 aa8.81□□□□□ -1
PTK2-223ENST00000520828 GAREM2Q75VX8 874 aa8.81□□□□□ -1
PTK2-223ENST00000520828 SYT13Q7L8C5 426 aa8.81□□□□□ -1
PTK2-223ENST00000520828 DNAJB7Q7Z6W7 309 aaPredicted RBP8.81□□□□□ -1
PTK2-223ENST00000520828 ITIH5Q86UX2 942 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms