RNA–Protein interactions for RNA: ENST00000520746.1

HDAC2-208, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-208ENST00000520746 PNMA8BQ9ULN7 279 aaPredicted RBP4.74□□□□□ -1.65
HDAC2-208ENST00000520746 IPPQ9Y573 584 aa4.74□□□□□ -1.65
HDAC2-208ENST00000520746 RFPL1O75677 317 aa4.73□□□□□ -1.65
HDAC2-208ENST00000520746 POU2F2P09086 479 aa4.73□□□□□ -1.65
HDAC2-208ENST00000520746 PDCP20941 246 aa4.73□□□□□ -1.65
HDAC2-208ENST00000520746 FGFR4P22455 802 aa4.73□□□□□ -1.65
HDAC2-208ENST00000520746 AKAP5P24588 427 aa4.73□□□□□ -1.65
HDAC2-208ENST00000520746 CTGFP29279 349 aa4.73□□□□□ -1.65
HDAC2-208ENST00000520746 CYP2C19P33261 490 aa4.73□□□□□ -1.65
HDAC2-208ENST00000520746 SLC6A9P48067 706 aa4.73□□□□□ -1.65
HDAC2-208ENST00000520746 RAP2BP61225 183 aa4.73□□□□□ -1.65
HDAC2-208ENST00000520746 SRSF4Q08170 494 aaKnown RBP4.73□□□□□ -1.65
HDAC2-208ENST00000520746 ZNF788Q6ZQV5 615 aa4.73□□□□□ -1.65
HDAC2-208ENST00000520746 ZNF572Q7Z3I7 529 aaPredicted RBP4.73□□□□□ -1.65
HDAC2-208ENST00000520746 CATIPQ7Z7H3 387 aa4.73□□□□□ -1.65
HDAC2-208ENST00000520746 FMNL3Q8IVF7 1028 aa4.73□□□□□ -1.65
HDAC2-208ENST00000520746 TRMT2AQ8IZ69 625 aaKnown RBP4.73□□□□□ -1.65
HDAC2-208ENST00000520746 Q8N9P0 234 aaPredicted RBP4.73□□□□□ -1.65
HDAC2-208ENST00000520746 KAT5Q92993 513 aa4.73□□□□□ -1.65
HDAC2-208ENST00000520746 TSR2Q969E8 191 aaKnown RBP4.73□□□□□ -1.65
HDAC2-208ENST00000520746 RAB24Q969Q5 203 aa4.73□□□□□ -1.65
HDAC2-208ENST00000520746 LRGUKQ96M69 825 aa4.73□□□□□ -1.65
HDAC2-208ENST00000520746 NUP88Q99567 741 aaPredicted RBP4.73□□□□□ -1.65
HDAC2-208ENST00000520746 LANCL2Q9NS86 450 aa4.73□□□□□ -1.65
HDAC2-208ENST00000520746 ASB6Q9NWX5 421 aa4.73□□□□□ -1.65
HDAC2-208ENST00000520746 ARPP21Q9UBL0 812 aaPredicted RBP4.73□□□□□ -1.65
HDAC2-208ENST00000520746 SIK3Q9Y2K2 1263 aa4.73□□□□□ -1.65
HDAC2-208ENST00000520746 TSPAN6O43657 245 aa4.72□□□□□ -1.65
HDAC2-208ENST00000520746 PARNO95453 639 aaKnown RBP4.72□□□□□ -1.65
HDAC2-208ENST00000520746 MAPK7Q13164 816 aa4.72□□□□□ -1.65
HDAC2-208ENST00000520746 IFIT1BQ5T764 474 aaKnown RBP4.72□□□□□ -1.65
HDAC2-208ENST00000520746 PPP4R3AQ6IN85 833 aa4.72□□□□□ -1.65
HDAC2-208ENST00000520746 RSPH3Q86UC2 560 aa4.72□□□□□ -1.65
HDAC2-208ENST00000520746 ZNF366Q8N895 744 aa4.72□□□□□ -1.65
HDAC2-208ENST00000520746 GTPBP4Q9BZE4 634 aaKnown RBP4.72□□□□□ -1.65
HDAC2-208ENST00000520746 REXO4Q9GZR2 422 aaKnown RBP4.72□□□□□ -1.65
HDAC2-208ENST00000520746 RNPEPQ9H4A4 650 aa4.72□□□□□ -1.65
HDAC2-208ENST00000520746 IL17RBQ9NRM6 502 aa4.72□□□□□ -1.65
HDAC2-208ENST00000520746 TDP1Q9NUW8 608 aa4.72□□□□□ -1.65
HDAC2-208ENST00000520746 TMEM140Q9NV12 185 aa4.72□□□□□ -1.65
HDAC2-208ENST00000520746 KCNE5Q9UJ90 142 aa4.72□□□□□ -1.65
HDAC2-208ENST00000520746 AJAP1Q9UKB5 411 aaPredicted RBP4.72□□□□□ -1.65
HDAC2-208ENST00000520746 ATRNL1Q5VV63 1379 aa4.72□□□□□ -1.65
HDAC2-208ENST00000520746 AATKQ6ZMQ8 1374 aa4.71□□□□□ -1.66
HDAC2-208ENST00000520746 WIPF3A6NGB9 483 aa4.71□□□□□ -1.66
HDAC2-208ENST00000520746 PRPF3O43395 683 aaKnown RBP4.71□□□□□ -1.66
HDAC2-208ENST00000520746 AP1G1O43747 822 aa4.71□□□□□ -1.66
HDAC2-208ENST00000520746 DTNBO60941 627 aa4.71□□□□□ -1.66
HDAC2-208ENST00000520746 OFD1O75665 1012 aa4.71□□□□□ -1.66
HDAC2-208ENST00000520746 IL2RBP14784 551 aa4.71□□□□□ -1.66
HDAC2-208ENST00000520746 ALOX15P16050 662 aaPredicted RBP4.71□□□□□ -1.66
HDAC2-208ENST00000520746 HSD11B2P80365 405 aa4.71□□□□□ -1.66
HDAC2-208ENST00000520746 MLC1Q15049 377 aa4.71□□□□□ -1.66
HDAC2-208ENST00000520746 FAM102BQ5T8I3 360 aa4.71□□□□□ -1.66
HDAC2-208ENST00000520746 USP45Q70EL2 814 aa4.71□□□□□ -1.66
HDAC2-208ENST00000520746 WDR75Q8IWA0 830 aaKnown RBP4.71□□□□□ -1.66
HDAC2-208ENST00000520746 DRC7Q8IY82 874 aa4.71□□□□□ -1.66
HDAC2-208ENST00000520746 MYO1HQ8N1T3 1032 aa4.71□□□□□ -1.66
HDAC2-208ENST00000520746 FAM43AQ8N2R8 423 aa4.71□□□□□ -1.66
HDAC2-208ENST00000520746 CYFIP2Q96F07 1278 aa4.71□□□□□ -1.66
HDAC2-208ENST00000520746 TMX3Q96JJ7 454 aa4.71□□□□□ -1.66
HDAC2-208ENST00000520746 UNKLQ9H9P5 680 aaKnown RBP4.71□□□□□ -1.66
HDAC2-208ENST00000520746 KCTD5Q9NXV2 234 aa4.71□□□□□ -1.66
HDAC2-208ENST00000520746 CHPF2Q9P2E5 772 aa4.71□□□□□ -1.66
HDAC2-208ENST00000520746 ZNF70Q9UC06 446 aaPredicted RBP4.71□□□□□ -1.66
HDAC2-208ENST00000520746 USP25Q9UHP3 1055 aa4.71□□□□□ -1.66
HDAC2-208ENST00000520746 PRDM2Q13029 1718 aa4.71□□□□□ -1.66
HDAC2-208ENST00000520746 CLASP1Q7Z460 1538 aa4.71□□□□□ -1.66
HDAC2-208ENST00000520746 PRG4Q92954 1404 aaPredicted RBP4.71□□□□□ -1.66
HDAC2-208ENST00000520746 MYBBP1AQ9BQG0 1328 aaKnown RBP4.71□□□□□ -1.66
HDAC2-208ENST00000520746 GPR32O75388 356 aa4.7□□□□□ -1.66
HDAC2-208ENST00000520746 AMY1AP04745 511 aa4.7□□□□□ -1.66
HDAC2-208ENST00000520746 RPLP2P05387 115 aaKnown RBP4.7□□□□□ -1.66
HDAC2-208ENST00000520746 RAP2AP10114 183 aa4.7□□□□□ -1.66
HDAC2-208ENST00000520746 HSPA6P17066 643 aa4.7□□□□□ -1.66
HDAC2-208ENST00000520746 FPR1P21462 350 aa4.7□□□□□ -1.66
HDAC2-208ENST00000520746 GCSHP23434 173 aa4.7□□□□□ -1.66
HDAC2-208ENST00000520746 FXR1P51114 621 aaKnown RBP eCLIP4.7□□□□□ -1.66
HDAC2-208ENST00000520746 CDC42EP1Q00587 391 aa4.7□□□□□ -1.66
HDAC2-208ENST00000520746 TARDBPQ13148 414 aaKnown RBP eCLIP4.7□□□□□ -1.66
HDAC2-208ENST00000520746 SP140Q13342 867 aa4.7□□□□□ -1.66
HDAC2-208ENST00000520746 GTF2H3Q13889 308 aa4.7□□□□□ -1.66
HDAC2-208ENST00000520746 ZNF267Q14586 743 aaPredicted RBP4.7□□□□□ -1.66
HDAC2-208ENST00000520746 CYP2A13Q16696 494 aa4.7□□□□□ -1.66
HDAC2-208ENST00000520746 CXorf57Q6NSI4 855 aaKnown RBP4.7□□□□□ -1.66
HDAC2-208ENST00000520746 GRAMD1CQ8IYS0 662 aa4.7□□□□□ -1.66
HDAC2-208ENST00000520746 PRR18Q8N4B5 295 aa4.7□□□□□ -1.66
HDAC2-208ENST00000520746 ZGPATQ8N5A5 531 aaKnown RBP4.7□□□□□ -1.66
HDAC2-208ENST00000520746 CLPTM1LQ96KA5 538 aa4.7□□□□□ -1.66
HDAC2-208ENST00000520746 UROC1Q96N76 676 aa4.7□□□□□ -1.66
HDAC2-208ENST00000520746 MAP3K14Q99558 947 aa4.7□□□□□ -1.66
HDAC2-208ENST00000520746 HEPHQ9BQS7 1158 aa4.7□□□□□ -1.66
HDAC2-208ENST00000520746 MOCS1Q9NZB8 636 aa4.7□□□□□ -1.66
HDAC2-208ENST00000520746 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.7□□□□□ -1.66
HDAC2-208ENST00000520746 PCDHB1Q9Y5F3 818 aa4.7□□□□□ -1.66
HDAC2-208ENST00000520746 ACTL7AQ9Y615 435 aa4.7□□□□□ -1.66
HDAC2-208ENST00000520746 CFAP20Q9Y6A4 193 aaKnown RBP4.7□□□□□ -1.66
HDAC2-208ENST00000520746 CUX1P39880 1505 aa4.7□□□□□ -1.66
HDAC2-208ENST00000520746 WRNQ14191 1432 aaPredicted RBP eCLIP4.7□□□□□ -1.66
HDAC2-208ENST00000520746 SGTAO43765 313 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms