RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 CCDC73Q6ZRK6 1079 aa21.62■■□□□ 1.05
UBE2D3-220ENST00000505307 DYMQ7RTS9 669 aa21.62■■□□□ 1.05
UBE2D3-220ENST00000505307 SFR1Q86XK3 245 aa21.62■■□□□ 1.05
UBE2D3-220ENST00000505307 HS6ST3Q8IZP7 471 aa21.62■■□□□ 1.05
UBE2D3-220ENST00000505307 DEPDC1BQ8WUY9 529 aa21.62■■□□□ 1.05
UBE2D3-220ENST00000505307 IRF7Q92985 503 aa21.62■■□□□ 1.05
UBE2D3-220ENST00000505307 ZSCAN16Q9H4T2 348 aaPredicted RBP21.62■■□□□ 1.05
UBE2D3-220ENST00000505307 BRD9Q9H8M2 597 aa21.62■■□□□ 1.05
UBE2D3-220ENST00000505307 MAN2B1O00754 1011 aa21.61■■□□□ 1.05
UBE2D3-220ENST00000505307 PPP1R37O75864 691 aa21.61■■□□□ 1.05
UBE2D3-220ENST00000505307 IL18RAPO95256 599 aa21.61■■□□□ 1.05
UBE2D3-220ENST00000505307 FGF19O95750 216 aa21.61■■□□□ 1.05
UBE2D3-220ENST00000505307 LMNAP02545 664 aaKnown RBP21.61■■□□□ 1.05
UBE2D3-220ENST00000505307 SP9P0CG40 484 aa21.61■■□□□ 1.05
UBE2D3-220ENST00000505307 PSMC3P17980 439 aa21.61■■□□□ 1.05
UBE2D3-220ENST00000505307 ZNF528Q3MIS6 628 aa21.61■■□□□ 1.05
UBE2D3-220ENST00000505307 TPRG1Q6ZUI0 275 aa21.61■■□□□ 1.05
UBE2D3-220ENST00000505307 ADSSL1Q8N142 457 aa21.61■■□□□ 1.05
UBE2D3-220ENST00000505307 TMEM130Q8N3G9 435 aa21.61■■□□□ 1.05
UBE2D3-220ENST00000505307 POMGNT1Q8WZA1 660 aa21.61■■□□□ 1.05
UBE2D3-220ENST00000505307 CLDN23Q96B33 292 aa21.61■■□□□ 1.05
UBE2D3-220ENST00000505307 PGLYRP2Q96PD5 576 aa21.61■■□□□ 1.05
UBE2D3-220ENST00000505307 STRA6Q9BX79 667 aa21.61■■□□□ 1.05
UBE2D3-220ENST00000505307 MRPL44Q9H9J2 332 aaKnown RBP21.61■■□□□ 1.05
UBE2D3-220ENST00000505307 FBXO4Q9UKT5 387 aa21.61■■□□□ 1.05
UBE2D3-220ENST00000505307 PCDHB13Q9Y5F0 798 aa21.61■■□□□ 1.05
UBE2D3-220ENST00000505307 PPEF2O14830 753 aa21.6■■□□□ 1.05
UBE2D3-220ENST00000505307 LAMTOR5O43504 91 aa21.6■■□□□ 1.05
UBE2D3-220ENST00000505307 MOSPD3O75425 235 aa21.6■■□□□ 1.05
UBE2D3-220ENST00000505307 VNN2O95498 520 aa21.6■■□□□ 1.05
UBE2D3-220ENST00000505307 OR4Q2P0C623 313 aa21.6■■□□□ 1.05
UBE2D3-220ENST00000505307 RPS9P46781 194 aaKnown RBP21.6■■□□□ 1.05
UBE2D3-220ENST00000505307 SMARCB1Q12824 385 aa21.6■■□□□ 1.05
UBE2D3-220ENST00000505307 ALCAMQ13740 583 aa21.6■■□□□ 1.05
UBE2D3-220ENST00000505307 SLC39A14Q15043 492 aa21.6■■□□□ 1.05
UBE2D3-220ENST00000505307 ITIH5Q86UX2 942 aa21.6■■□□□ 1.05
UBE2D3-220ENST00000505307 METTL23Q86XA0 190 aa21.6■■□□□ 1.05
UBE2D3-220ENST00000505307 KCNG4Q8TDN1 519 aa21.6■■□□□ 1.05
UBE2D3-220ENST00000505307 ACCSQ96QU6 501 aa21.6■■□□□ 1.05
UBE2D3-220ENST00000505307 OLFML3Q9NRN5 406 aa21.6■■□□□ 1.05
UBE2D3-220ENST00000505307 SPATA6Q9NWH7 488 aaPredicted RBP21.6■■□□□ 1.05
UBE2D3-220ENST00000505307 DPP3Q9NY33 737 aa21.6■■□□□ 1.05
UBE2D3-220ENST00000505307 CFAP54Q96N23 3096 aa21.59■■□□□ 1.05
UBE2D3-220ENST00000505307 MTMR11A4FU01 709 aa21.59■■□□□ 1.05
UBE2D3-220ENST00000505307 MYMKA6NI61 221 aa21.59■■□□□ 1.05
UBE2D3-220ENST00000505307 SPTLC1O15269 473 aa21.59■■□□□ 1.05
UBE2D3-220ENST00000505307 LRRN2O75325 713 aa21.59■■□□□ 1.05
UBE2D3-220ENST00000505307 LDHAP00338 332 aaKnown RBP21.59■■□□□ 1.05
UBE2D3-220ENST00000505307 TUFMP49411 452 aaKnown RBP21.59■■□□□ 1.05
UBE2D3-220ENST00000505307 TAF6P49848 677 aa21.59■■□□□ 1.05
UBE2D3-220ENST00000505307 MFSD6LQ8IWD5 586 aa21.59■■□□□ 1.05
UBE2D3-220ENST00000505307 THEM5Q8N1Q8 247 aa21.59■■□□□ 1.05
UBE2D3-220ENST00000505307 ZSCAN18Q8TBC5 510 aaPredicted RBP21.59■■□□□ 1.05
UBE2D3-220ENST00000505307 DNAJC19Q96DA6 116 aa21.59■■□□□ 1.05
UBE2D3-220ENST00000505307 ZSWIM3Q96MP5 696 aa21.59■■□□□ 1.05
UBE2D3-220ENST00000505307 CLIC6Q96NY7 704 aa21.59■■□□□ 1.05
UBE2D3-220ENST00000505307 LRRC3Q9BY71 257 aa21.59■■□□□ 1.05
UBE2D3-220ENST00000505307 SLITRK6Q9H5Y7 841 aa21.59■■□□□ 1.05
UBE2D3-220ENST00000505307 HEBP1Q9NRV9 189 aa21.59■■□□□ 1.05
UBE2D3-220ENST00000505307 MTF2Q9Y483 593 aaPredicted RBP21.59■■□□□ 1.05
UBE2D3-220ENST00000505307 VPS13AQ96RL7 3174 aa21.59■■□□□ 1.05
UBE2D3-220ENST00000505307 MIA3Q5JRA6 1907 aa21.59■■□□□ 1.05
UBE2D3-220ENST00000505307 TISP43B9A030 160 aa21.58■■□□□ 1.05
UBE2D3-220ENST00000505307 CD72P21854 359 aa21.58■■□□□ 1.05
UBE2D3-220ENST00000505307 ADSSP30520 456 aa21.58■■□□□ 1.05
UBE2D3-220ENST00000505307 CEBPZQ03701 1054 aaKnown RBP21.58■■□□□ 1.05
UBE2D3-220ENST00000505307 TEAD2Q15562 447 aa21.58■■□□□ 1.05
UBE2D3-220ENST00000505307 L1TD1Q5T7N2 865 aaKnown RBP21.58■■□□□ 1.05
UBE2D3-220ENST00000505307 CRELD2Q6UXH1 353 aaPredicted RBP21.58■■□□□ 1.05
UBE2D3-220ENST00000505307 VITQ6UXI7 678 aa21.58■■□□□ 1.05
UBE2D3-220ENST00000505307 TMC8Q8IU68 726 aa21.58■■□□□ 1.05
UBE2D3-220ENST00000505307 ATAD1Q8NBU5 361 aa21.58■■□□□ 1.05
UBE2D3-220ENST00000505307 SHKBP1Q8TBC3 707 aa21.58■■□□□ 1.05
UBE2D3-220ENST00000505307 C2orf15Q8WU43 125 aaKnown RBP21.58■■□□□ 1.05
UBE2D3-220ENST00000505307 PSMG2Q969U7 264 aa21.58■■□□□ 1.05
UBE2D3-220ENST00000505307 DNAJC25Q9H1X3 360 aa21.58■■□□□ 1.05
UBE2D3-220ENST00000505307 CRISPLD1Q9H336 500 aa21.58■■□□□ 1.05
UBE2D3-220ENST00000505307 ZNF334Q9HCZ1 680 aaPredicted RBP21.58■■□□□ 1.05
UBE2D3-220ENST00000505307 R4GN57 208 aa21.58■■□□□ 1.05
UBE2D3-220ENST00000505307 CACNA1IQ9P0X4 2223 aa21.57■■□□□ 1.04
UBE2D3-220ENST00000505307 CYB561D2O14569 222 aa21.57■■□□□ 1.04
UBE2D3-220ENST00000505307 ZNF263O14978 683 aa21.57■■□□□ 1.04
UBE2D3-220ENST00000505307 TARSP26639 723 aaKnown RBP21.57■■□□□ 1.04
UBE2D3-220ENST00000505307 GDI1P31150 447 aa21.57■■□□□ 1.04
UBE2D3-220ENST00000505307 PNPLA4P41247 253 aa21.57■■□□□ 1.04
UBE2D3-220ENST00000505307 STAT6P42226 847 aa21.57■■□□□ 1.04
UBE2D3-220ENST00000505307 MLLT6P55198 1093 aaPredicted RBP21.57■■□□□ 1.04
UBE2D3-220ENST00000505307 GRM2Q14416 872 aa21.57■■□□□ 1.04
UBE2D3-220ENST00000505307 SV2CQ496J9 727 aa21.57■■□□□ 1.04
UBE2D3-220ENST00000505307 FAM173BQ6P4H8 233 aa21.57■■□□□ 1.04
UBE2D3-220ENST00000505307 DNAJB7Q7Z6W7 309 aaPredicted RBP21.57■■□□□ 1.04
UBE2D3-220ENST00000505307 MAML2Q8IZL2 1156 aaPredicted RBP21.57■■□□□ 1.04
UBE2D3-220ENST00000505307 ZNF560Q96MR9 790 aa21.57■■□□□ 1.04
UBE2D3-220ENST00000505307 USP28Q96RU2 1077 aa21.57■■□□□ 1.04
UBE2D3-220ENST00000505307 IER2Q9BTL4 223 aa21.57■■□□□ 1.04
UBE2D3-220ENST00000505307 ZCWPW1Q9H0M4 648 aa21.57■■□□□ 1.04
UBE2D3-220ENST00000505307 MTMR6Q9Y217 621 aa21.57■■□□□ 1.04
UBE2D3-220ENST00000505307 SLC27A5Q9Y2P5 690 aa21.57■■□□□ 1.04
UBE2D3-220ENST00000505307 A0A1W2PRU2 124 aa21.56■■□□□ 1.04
UBE2D3-220ENST00000505307 FRMD3A2A2Y4 597 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms