RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 TOP3BO95985 862 aaKnown RBP17.07■□□□□ 0.32
HDAC6-236ENST00000498808 DUSP4Q13115 394 aa17.07■□□□□ 0.32
HDAC6-236ENST00000498808 TMEM130Q8N3G9 435 aa17.07■□□□□ 0.32
HDAC6-236ENST00000498808 CHFRQ96EP1 664 aa17.07■□□□□ 0.32
HDAC6-236ENST00000498808 IFT74Q96LB3 600 aa17.07■□□□□ 0.32
HDAC6-236ENST00000498808 TMEM209Q96SK2 561 aa17.07■□□□□ 0.32
HDAC6-236ENST00000498808 ADAM33Q9BZ11 813 aa17.07■□□□□ 0.32
HDAC6-236ENST00000498808 DUSP15Q9H1R2 295 aaPredicted RBP17.07■□□□□ 0.32
HDAC6-236ENST00000498808 ORC3Q9UBD5 711 aaPredicted RBP17.07■□□□□ 0.32
HDAC6-236ENST00000498808 C4orf47A7E2U8 309 aa17.06■□□□□ 0.32
HDAC6-236ENST00000498808 K7ERI5 159 aa17.06■□□□□ 0.32
HDAC6-236ENST00000498808 ABLIM1O14639 778 aa17.06■□□□□ 0.32
HDAC6-236ENST00000498808 FDPSP14324 419 aaKnown RBP17.06■□□□□ 0.32
HDAC6-236ENST00000498808 EPHB3P54753 998 aa17.06■□□□□ 0.32
HDAC6-236ENST00000498808 PLD1Q13393 1074 aa17.06■□□□□ 0.32
HDAC6-236ENST00000498808 TMEM196Q5HYL7 178 aa17.06■□□□□ 0.32
HDAC6-236ENST00000498808 GPR158Q5T848 1215 aa17.06■□□□□ 0.32
HDAC6-236ENST00000498808 FSTL4Q6MZW2 842 aa17.06■□□□□ 0.32
HDAC6-236ENST00000498808 TAS1R3Q7RTX0 852 aa17.06■□□□□ 0.32
HDAC6-236ENST00000498808 BPIFB1Q8TDL5 484 aa17.06■□□□□ 0.32
HDAC6-236ENST00000498808 ACAP3Q96P50 834 aa17.06■□□□□ 0.32
HDAC6-236ENST00000498808 TARS2Q9BW92 718 aaKnown RBP17.06■□□□□ 0.32
HDAC6-236ENST00000498808 TM6SF1Q9BZW5 370 aa17.06■□□□□ 0.32
HDAC6-236ENST00000498808 ATXN3LQ9H3M9 355 aa17.06■□□□□ 0.32
HDAC6-236ENST00000498808 BRMS1Q9HCU9 246 aa17.06■□□□□ 0.32
HDAC6-236ENST00000498808 SLC8A2Q9UPR5 921 aa17.06■□□□□ 0.32
HDAC6-236ENST00000498808 TIMM13Q9Y5L4 95 aaPredicted RBP17.06■□□□□ 0.32
HDAC6-236ENST00000498808 PHLPP2Q6ZVD8 1323 aa17.05■□□□□ 0.32
HDAC6-236ENST00000498808 WDFY3Q8IZQ1 3526 aa17.05■□□□□ 0.32
HDAC6-236ENST00000498808 SRRM3A6NNA2 597 aaPredicted RBP17.05■□□□□ 0.32
HDAC6-236ENST00000498808 BTBD18B2RXH4 712 aa17.05■□□□□ 0.32
HDAC6-236ENST00000498808 REC8O95072 547 aa17.05■□□□□ 0.32
HDAC6-236ENST00000498808 OAZ2O95190 189 aa17.05■□□□□ 0.32
HDAC6-236ENST00000498808 PROZP22891 400 aa17.05■□□□□ 0.32
HDAC6-236ENST00000498808 RPA1P27694 616 aa17.05■□□□□ 0.32
HDAC6-236ENST00000498808 GABRR2P28476 465 aa17.05■□□□□ 0.32
HDAC6-236ENST00000498808 PLCB2Q00722 1185 aa17.05■□□□□ 0.32
HDAC6-236ENST00000498808 YWHAHQ04917 246 aaPredicted RBP17.05■□□□□ 0.32
HDAC6-236ENST00000498808 ITPRIPL2Q3MIP1 535 aa17.05■□□□□ 0.32
HDAC6-236ENST00000498808 DNAJB7Q7Z6W7 309 aaPredicted RBP17.05■□□□□ 0.32
HDAC6-236ENST00000498808 TTC9BQ8N6N2 239 aa17.05■□□□□ 0.32
HDAC6-236ENST00000498808 KIFAP3Q92845 792 aa17.05■□□□□ 0.32
HDAC6-236ENST00000498808 GATA6Q92908 595 aa17.05■□□□□ 0.32
HDAC6-236ENST00000498808 PDRG1Q9NUG6 133 aa17.05■□□□□ 0.32
HDAC6-236ENST00000498808 TUBGCP4Q9UGJ1 667 aa17.05■□□□□ 0.32
HDAC6-236ENST00000498808 TMEM8BA6NDV4 472 aa17.04■□□□□ 0.32
HDAC6-236ENST00000498808 M0QZQ0 153 aa17.04■□□□□ 0.32
HDAC6-236ENST00000498808 PFKFB2O60825 505 aa17.04■□□□□ 0.32
HDAC6-236ENST00000498808 MCF2P10911 925 aa17.04■□□□□ 0.32
HDAC6-236ENST00000498808 MARCKSP29966 332 aaPredicted RBP17.04■□□□□ 0.32
HDAC6-236ENST00000498808 ALDH1A3P47895 512 aa17.04■□□□□ 0.32
HDAC6-236ENST00000498808 GPR17Q13304 367 aa17.04■□□□□ 0.32
HDAC6-236ENST00000498808 ECM1Q16610 540 aa17.04■□□□□ 0.32
HDAC6-236ENST00000498808 SH3PXD2AQ5TCZ1 1133 aa17.04■□□□□ 0.32
HDAC6-236ENST00000498808 CENPPQ6IPU0 288 aa17.04■□□□□ 0.32
HDAC6-236ENST00000498808 CAMKK1Q8N5S9 505 aa17.04■□□□□ 0.32
HDAC6-236ENST00000498808 PSMG2Q969U7 264 aa17.04■□□□□ 0.32
HDAC6-236ENST00000498808 HHIPQ96QV1 700 aa17.04■□□□□ 0.32
HDAC6-236ENST00000498808 MRPL4Q9BYD3 311 aaKnown RBP17.04■□□□□ 0.32
HDAC6-236ENST00000498808 SMG9Q9H0W8 520 aaKnown RBP17.04■□□□□ 0.32
HDAC6-236ENST00000498808 HPS4Q9NQG7 708 aa17.04■□□□□ 0.32
HDAC6-236ENST00000498808 TPCN1Q9ULQ1 816 aa17.04■□□□□ 0.32
HDAC6-236ENST00000498808 SLC27A5Q9Y2P5 690 aa17.04■□□□□ 0.32
HDAC6-236ENST00000498808 ANKRD11Q6UB99 2663 aaPredicted RBP17.04■□□□□ 0.32
HDAC6-236ENST00000498808 NUP205Q92621 2012 aa17.04■□□□□ 0.32
HDAC6-236ENST00000498808 LNP1A1A4G5 178 aa17.03■□□□□ 0.32
HDAC6-236ENST00000498808 BCLAF3A2AJT9 711 aaKnown RBP17.03■□□□□ 0.32
HDAC6-236ENST00000498808 MTMR11A4FU01 709 aa17.03■□□□□ 0.32
HDAC6-236ENST00000498808 OTOL1A6NHN0 477 aaPredicted RBP17.03■□□□□ 0.32
HDAC6-236ENST00000498808 DCLK1O15075 740 aa17.03■□□□□ 0.32
HDAC6-236ENST00000498808 ATG13O75143 517 aa17.03■□□□□ 0.32
HDAC6-236ENST00000498808 RNF40O75150 1001 aa17.03■□□□□ 0.32
HDAC6-236ENST00000498808 SOAT2O75908 522 aa17.03■□□□□ 0.32
HDAC6-236ENST00000498808 CAVIN2O95810 425 aa17.03■□□□□ 0.32
HDAC6-236ENST00000498808 HARSP12081 509 aaKnown RBP17.03■□□□□ 0.32
HDAC6-236ENST00000498808 WEE1P30291 646 aa17.03■□□□□ 0.32
HDAC6-236ENST00000498808 NPTX2P47972 431 aa17.03■□□□□ 0.32
HDAC6-236ENST00000498808 MCM2P49736 904 aa17.03■□□□□ 0.32
HDAC6-236ENST00000498808 CYP4F8P98187 520 aa17.03■□□□□ 0.32
HDAC6-236ENST00000498808 CREB5Q02930 508 aa17.03■□□□□ 0.32
HDAC6-236ENST00000498808 SLC10A6Q3KNW5 377 aa17.03■□□□□ 0.32
HDAC6-236ENST00000498808 DIS3L2Q8IYB7 885 aaKnown RBP17.03■□□□□ 0.32
HDAC6-236ENST00000498808 ATAD1Q8NBU5 361 aa17.03■□□□□ 0.32
HDAC6-236ENST00000498808 WASF1Q92558 559 aa17.03■□□□□ 0.32
HDAC6-236ENST00000498808 SCNM1Q9BWG6 230 aa17.03■□□□□ 0.32
HDAC6-236ENST00000498808 BHMT2Q9H2M3 363 aa17.03■□□□□ 0.32
HDAC6-236ENST00000498808 TASP1Q9H6P5 420 aa17.03■□□□□ 0.32
HDAC6-236ENST00000498808 ASB3Q9Y575 518 aa17.03■□□□□ 0.32
HDAC6-236ENST00000498808 AKAP13Q12802 2813 aa17.02■□□□□ 0.32
HDAC6-236ENST00000498808 ABCA7Q8IZY2 2146 aa17.02■□□□□ 0.32
HDAC6-236ENST00000498808 CCDC169A6NNP5 214 aa17.02■□□□□ 0.32
HDAC6-236ENST00000498808 TRDMT1O14717 391 aaKnown RBP17.02■□□□□ 0.32
HDAC6-236ENST00000498808 EGFP01133 1207 aa17.02■□□□□ 0.32
HDAC6-236ENST00000498808 MCM7P33993 719 aa17.02■□□□□ 0.32
HDAC6-236ENST00000498808 AARSP49588 968 aaKnown RBP eCLIP17.02■□□□□ 0.32
HDAC6-236ENST00000498808 PEX3P56589 373 aa17.02■□□□□ 0.32
HDAC6-236ENST00000498808 GRSF1Q12849 480 aaKnown RBP eCLIP17.02■□□□□ 0.32
HDAC6-236ENST00000498808 ELF2Q15723 593 aa17.02■□□□□ 0.32
HDAC6-236ENST00000498808 SEZ6Q53EL9 994 aa17.02■□□□□ 0.32
HDAC6-236ENST00000498808 ARHGAP15Q53QZ3 475 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms