RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 CCDC113Q9H0I3 377 aa8.38□□□□□ -1.07
PDPN-205ENST00000487038 CXCL16Q9H2A7 254 aa8.38□□□□□ -1.07
PDPN-205ENST00000487038 ATXN3LQ9H3M9 355 aa8.38□□□□□ -1.07
PDPN-205ENST00000487038 GPRC5CQ9NQ84 441 aa8.38□□□□□ -1.07
PDPN-205ENST00000487038 ZMYM5Q9UJ78 669 aa8.38□□□□□ -1.07
PDPN-205ENST00000487038 ASB3Q9Y575 518 aa8.38□□□□□ -1.07
PDPN-205ENST00000487038 APC2O95996 2303 aa8.38□□□□□ -1.07
PDPN-205ENST00000487038 PTPRDP23468 1912 aa8.37□□□□□ -1.07
PDPN-205ENST00000487038 ADAMTS9Q9P2N4 1935 aa8.37□□□□□ -1.07
PDPN-205ENST00000487038 PHLPP2Q6ZVD8 1323 aa8.37□□□□□ -1.07
PDPN-205ENST00000487038 BCLAF3A2AJT9 711 aaKnown RBP8.37□□□□□ -1.07
PDPN-205ENST00000487038 TTLL13PA6NNM8 815 aa8.37□□□□□ -1.07
PDPN-205ENST00000487038 H0Y626 953 aa8.37□□□□□ -1.07
PDPN-205ENST00000487038 RNF40O75150 1001 aa8.37□□□□□ -1.07
PDPN-205ENST00000487038 TRIM16O95361 564 aa8.37□□□□□ -1.07
PDPN-205ENST00000487038 APBB3O95704 486 aa8.37□□□□□ -1.07
PDPN-205ENST00000487038 DRD1P21728 446 aa8.37□□□□□ -1.07
PDPN-205ENST00000487038 GRM5P41594 1212 aa8.37□□□□□ -1.07
PDPN-205ENST00000487038 EVCP57679 992 aa8.37□□□□□ -1.07
PDPN-205ENST00000487038 LMAN2Q12907 356 aa8.37□□□□□ -1.07
PDPN-205ENST00000487038 ZNF568Q3ZCX4 644 aa8.37□□□□□ -1.07
PDPN-205ENST00000487038 BMP2KLQ5H9B9 411 aa8.37□□□□□ -1.07
PDPN-205ENST00000487038 TMEM196Q5HYL7 178 aa8.37□□□□□ -1.07
PDPN-205ENST00000487038 GPR158Q5T848 1215 aa8.37□□□□□ -1.07
PDPN-205ENST00000487038 EEF1DP3Q658K8 133 aa8.37□□□□□ -1.07
PDPN-205ENST00000487038 RNF19BQ6ZMZ0 732 aa8.37□□□□□ -1.07
PDPN-205ENST00000487038 CYP2U1Q7Z449 544 aa8.37□□□□□ -1.07
PDPN-205ENST00000487038 ITIH5Q86UX2 942 aa8.37□□□□□ -1.07
PDPN-205ENST00000487038 TMC8Q8IU68 726 aa8.37□□□□□ -1.07
PDPN-205ENST00000487038 CCDC26Q8TAB7 109 aa8.37□□□□□ -1.07
PDPN-205ENST00000487038 DDX12PQ92771 950 aa8.37□□□□□ -1.07
PDPN-205ENST00000487038 RSPRY1Q96DX4 576 aa8.37□□□□□ -1.07
PDPN-205ENST00000487038 SUSD3Q96L08 255 aa8.37□□□□□ -1.07
PDPN-205ENST00000487038 HHIPQ96QV1 700 aa8.37□□□□□ -1.07
PDPN-205ENST00000487038 NACC1Q96RE7 527 aa8.37□□□□□ -1.07
PDPN-205ENST00000487038 TTC12Q9H892 705 aaPredicted RBP8.37□□□□□ -1.07
PDPN-205ENST00000487038 BRMS1Q9HCU9 246 aa8.37□□□□□ -1.07
PDPN-205ENST00000487038 KCNJ14Q9UNX9 436 aa8.37□□□□□ -1.07
PDPN-205ENST00000487038 MSRB2Q9Y3D2 182 aa8.37□□□□□ -1.07
PDPN-205ENST00000487038 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.37□□□□□ -1.07
PDPN-205ENST00000487038 EIF4E1BA6NMX2 242 aaKnown RBP8.36□□□□□ -1.07
PDPN-205ENST00000487038 NEMFO60524 1076 aa8.36□□□□□ -1.07
PDPN-205ENST00000487038 CDC45O75419 566 aa8.36□□□□□ -1.07
PDPN-205ENST00000487038 GABRR2P28476 465 aa8.36□□□□□ -1.07
PDPN-205ENST00000487038 WEE1P30291 646 aa8.36□□□□□ -1.07
PDPN-205ENST00000487038 CDC25CP30307 473 aa8.36□□□□□ -1.07
PDPN-205ENST00000487038 DPP6P42658 865 aa8.36□□□□□ -1.07
PDPN-205ENST00000487038 SOX4Q06945 474 aaPredicted RBP8.36□□□□□ -1.07
PDPN-205ENST00000487038 TNK2Q07912 1038 aa8.36□□□□□ -1.07
PDPN-205ENST00000487038 RUNX3Q13761 415 aa8.36□□□□□ -1.07
PDPN-205ENST00000487038 VEPH1Q14D04 833 aa8.36□□□□□ -1.07
PDPN-205ENST00000487038 UAP1L1Q3KQV9 507 aa8.36□□□□□ -1.07
PDPN-205ENST00000487038 STXBP5Q5T5C0 1151 aa8.36□□□□□ -1.07
PDPN-205ENST00000487038 PMS2CLQ68D20 193 aa8.36□□□□□ -1.07
PDPN-205ENST00000487038 KIAA1211LQ6NV74 962 aa8.36□□□□□ -1.07
PDPN-205ENST00000487038 PKN3Q6P5Z2 889 aa8.36□□□□□ -1.07
PDPN-205ENST00000487038 SYT13Q7L8C5 426 aa8.36□□□□□ -1.07
PDPN-205ENST00000487038 DEFB124Q8NES8 71 aa8.36□□□□□ -1.07
PDPN-205ENST00000487038 PSMG2Q969U7 264 aa8.36□□□□□ -1.07
PDPN-205ENST00000487038 NUSAP1Q9BXS6 441 aaKnown RBP8.36□□□□□ -1.07
PDPN-205ENST00000487038 TUFT1Q9NNX1 390 aa8.36□□□□□ -1.07
PDPN-205ENST00000487038 CNTN3Q9P232 1028 aa8.36□□□□□ -1.07
PDPN-205ENST00000487038 ANKFY1Q9P2R3 1169 aa8.36□□□□□ -1.07
PDPN-205ENST00000487038 EBF1Q9UH73 591 aa8.36□□□□□ -1.07
PDPN-205ENST00000487038 PCDHB8Q9UN66 801 aa8.36□□□□□ -1.07
PDPN-205ENST00000487038 TNFSF13BQ9Y275 285 aa8.36□□□□□ -1.07
PDPN-205ENST00000487038 SNX14Q9Y5W7 946 aa8.36□□□□□ -1.07
PDPN-205ENST00000487038 MYO18BQ8IUG5 2567 aa8.35□□□□□ -1.07
PDPN-205ENST00000487038 STK36Q9NRP7 1315 aa8.35□□□□□ -1.07
PDPN-205ENST00000487038 ARHGEF35A5YM69 484 aa8.35□□□□□ -1.07
PDPN-205ENST00000487038 OR6C75A6NL08 312 aa8.35□□□□□ -1.07
PDPN-205ENST00000487038 K7ERI5 159 aa8.35□□□□□ -1.07
PDPN-205ENST00000487038 TRDMT1O14717 391 aaKnown RBP8.35□□□□□ -1.07
PDPN-205ENST00000487038 HYAL3O43820 417 aaPredicted RBP8.35□□□□□ -1.07
PDPN-205ENST00000487038 SEC24BO95487 1268 aa8.35□□□□□ -1.07
PDPN-205ENST00000487038 TOP3BO95985 862 aaKnown RBP8.35□□□□□ -1.07
PDPN-205ENST00000487038 EDN1P05305 212 aa8.35□□□□□ -1.07
PDPN-205ENST00000487038 KCNE1P15382 129 aa8.35□□□□□ -1.07
PDPN-205ENST00000487038 IGFBP6P24592 240 aaPredicted RBP8.35□□□□□ -1.07
PDPN-205ENST00000487038 HOXC13P31276 330 aa8.35□□□□□ -1.07
PDPN-205ENST00000487038 HSPA4P34932 840 aa8.35□□□□□ -1.07
PDPN-205ENST00000487038 AVPR1AP37288 418 aa8.35□□□□□ -1.07
PDPN-205ENST00000487038 TXKP42681 527 aa8.35□□□□□ -1.07
PDPN-205ENST00000487038 DGKEP52429 567 aa8.35□□□□□ -1.07
PDPN-205ENST00000487038 OSTNP61366 133 aa8.35□□□□□ -1.07
PDPN-205ENST00000487038 BFSP1Q12934 665 aa8.35□□□□□ -1.07
PDPN-205ENST00000487038 TAF12Q16514 161 aa8.35□□□□□ -1.07
PDPN-205ENST00000487038 USP39Q53GS9 565 aaKnown RBP8.35□□□□□ -1.07
PDPN-205ENST00000487038 XKR4Q5GH76 650 aa8.35□□□□□ -1.07
PDPN-205ENST00000487038 LMBRD2Q68DH5 695 aaPredicted RBP8.35□□□□□ -1.07
PDPN-205ENST00000487038 FSTL4Q6MZW2 842 aa8.35□□□□□ -1.07
PDPN-205ENST00000487038 CC2D1AQ6P1N0 951 aaPredicted RBP8.35□□□□□ -1.07
PDPN-205ENST00000487038 PADI6Q6TGC4 694 aa8.35□□□□□ -1.07
PDPN-205ENST00000487038 ALKAL1Q6UXT8 129 aa8.35□□□□□ -1.07
PDPN-205ENST00000487038 USP37Q86T82 979 aa8.35□□□□□ -1.07
PDPN-205ENST00000487038 PROSER1Q86XN7 944 aa8.35□□□□□ -1.07
PDPN-205ENST00000487038 CEP120Q8N960 986 aa8.35□□□□□ -1.07
PDPN-205ENST00000487038 BEST2Q8NFU1 509 aa8.35□□□□□ -1.07
PDPN-205ENST00000487038 TSTD1Q8NFU3 115 aa8.35□□□□□ -1.07
PDPN-205ENST00000487038 RPLP0P6Q8NHW5 317 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms