RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 CBWD5Q5RIA9 395 aa12.23□□□□□ -0.45
NUP50-216ENST00000486184 FKBP15Q5T1M5 1219 aa12.23□□□□□ -0.45
NUP50-216ENST00000486184 ZNF280DQ6N043 979 aa12.23□□□□□ -0.45
NUP50-216ENST00000486184 CD300LGQ6UXG3 332 aa12.23□□□□□ -0.45
NUP50-216ENST00000486184 C15orf39Q6ZRI6 1047 aa12.23□□□□□ -0.45
NUP50-216ENST00000486184 ANKS3Q6ZW76 656 aa12.23□□□□□ -0.45
NUP50-216ENST00000486184 LUZP1Q86V48 1076 aa12.23□□□□□ -0.45
NUP50-216ENST00000486184 TAS1R2Q8TE23 839 aa12.23□□□□□ -0.45
NUP50-216ENST00000486184 B3GALT6Q96L58 329 aa12.23□□□□□ -0.45
NUP50-216ENST00000486184 VN1R3Q9BXE9 311 aa12.23□□□□□ -0.45
NUP50-216ENST00000486184 EMILIN2Q9BXX0 1053 aa12.23□□□□□ -0.45
NUP50-216ENST00000486184 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.23□□□□□ -0.45
NUP50-216ENST00000486184 RAB20Q9NX57 234 aa12.23□□□□□ -0.45
NUP50-216ENST00000486184 TAB2Q9NYJ8 693 aa12.23□□□□□ -0.45
NUP50-216ENST00000486184 LMCD1Q9NZU5 365 aa12.23□□□□□ -0.45
NUP50-216ENST00000486184 NXF1Q9UBU9 619 aaKnown RBP12.23□□□□□ -0.45
NUP50-216ENST00000486184 SPTLC1O15269 473 aa12.22□□□□□ -0.45
NUP50-216ENST00000486184 STAU1O95793 577 aaKnown RBP12.22□□□□□ -0.45
NUP50-216ENST00000486184 FOSL2P15408 326 aa12.22□□□□□ -0.45
NUP50-216ENST00000486184 TYMPP19971 482 aa12.22□□□□□ -0.45
NUP50-216ENST00000486184 FGFR3P22607 806 aa12.22□□□□□ -0.45
NUP50-216ENST00000486184 AARSP49588 968 aaKnown RBP eCLIP12.22□□□□□ -0.45
NUP50-216ENST00000486184 NOP14P78316 857 aaKnown RBP12.22□□□□□ -0.45
NUP50-216ENST00000486184 NCAPHQ15003 741 aa12.22□□□□□ -0.45
NUP50-216ENST00000486184 IQCB1Q15051 598 aa12.22□□□□□ -0.45
NUP50-216ENST00000486184 KRT31Q15323 416 aa12.22□□□□□ -0.45
NUP50-216ENST00000486184 PTPN14Q15678 1187 aa12.22□□□□□ -0.45
NUP50-216ENST00000486184 FILIP1LQ4L180 1135 aa12.22□□□□□ -0.45
NUP50-216ENST00000486184 CTXN3Q4LDR2 81 aa12.22□□□□□ -0.45
NUP50-216ENST00000486184 VWA3BQ502W6 1294 aa12.22□□□□□ -0.45
NUP50-216ENST00000486184 RTP2Q5QGT7 225 aa12.22□□□□□ -0.45
NUP50-216ENST00000486184 VARS2Q5ST30 1063 aaKnown RBP12.22□□□□□ -0.45
NUP50-216ENST00000486184 OVOS1Q6IE37 1185 aa12.22□□□□□ -0.45
NUP50-216ENST00000486184 GBP6Q6ZN66 633 aa12.22□□□□□ -0.45
NUP50-216ENST00000486184 TAS1R1Q7RTX1 841 aa12.22□□□□□ -0.45
NUP50-216ENST00000486184 RNF168Q8IYW5 571 aaPredicted RBP12.22□□□□□ -0.45
NUP50-216ENST00000486184 THEM5Q8N1Q8 247 aa12.22□□□□□ -0.45
NUP50-216ENST00000486184 TMEM86AQ8N2M4 240 aa12.22□□□□□ -0.45
NUP50-216ENST00000486184 MICALL1Q8N3F8 863 aa12.22□□□□□ -0.45
NUP50-216ENST00000486184 TOP6BLQ8N6T0 577 aa12.22□□□□□ -0.45
NUP50-216ENST00000486184 CXorf38Q8TB03 319 aa12.22□□□□□ -0.45
NUP50-216ENST00000486184 AUTS2Q8WXX7 1259 aa12.22□□□□□ -0.45
NUP50-216ENST00000486184 MYLIPQ8WY64 445 aa12.22□□□□□ -0.45
NUP50-216ENST00000486184 CDX2Q99626 313 aaPredicted RBP12.22□□□□□ -0.45
NUP50-216ENST00000486184 NDST4Q9H3R1 872 aa12.22□□□□□ -0.45
NUP50-216ENST00000486184 NSUN3Q9H649 340 aaKnown RBP12.22□□□□□ -0.45
NUP50-216ENST00000486184 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.22□□□□□ -0.459e-9■■■■■ 111.8
NUP50-216ENST00000486184 GDAP2Q9NXN4 497 aa12.22□□□□□ -0.45
NUP50-216ENST00000486184 GCNT4Q9P109 453 aa12.22□□□□□ -0.45
NUP50-216ENST00000486184 TIMM13Q9Y5L4 95 aaPredicted RBP12.22□□□□□ -0.45
NUP50-216ENST00000486184 PLXNA3P51805 1871 aa12.22□□□□□ -0.45
NUP50-216ENST00000486184 MTCL1Q9Y4B5 1905 aaKnown RBP12.21□□□□□ -0.45
NUP50-216ENST00000486184 FSD2A1L4K1 749 aa12.21□□□□□ -0.45
NUP50-216ENST00000486184 FSCN2O14926 492 aa12.21□□□□□ -0.45
NUP50-216ENST00000486184 PMM2O15305 246 aa12.21□□□□□ -0.45
NUP50-216ENST00000486184 EFEMP2O95967 443 aa12.21□□□□□ -0.45
NUP50-216ENST00000486184 ASS1P00966 412 aaKnown RBP12.21□□□□□ -0.45
NUP50-216ENST00000486184 SERPINC1P01008 464 aa12.21□□□□□ -0.45
NUP50-216ENST00000486184 ADH1AP07327 375 aa12.21□□□□□ -0.45
NUP50-216ENST00000486184 TRIM21P19474 475 aaKnown RBP12.21□□□□□ -0.45
NUP50-216ENST00000486184 IGFBP6P24592 240 aaPredicted RBP12.21□□□□□ -0.45
NUP50-216ENST00000486184 IRS1P35568 1242 aa12.21□□□□□ -0.45
NUP50-216ENST00000486184 NDUFV1P49821 464 aa12.21□□□□□ -0.45
NUP50-216ENST00000486184 PRSS55Q6UWB4 352 aaPredicted RBP12.21□□□□□ -0.45
NUP50-216ENST00000486184 SCARA5Q6ZMJ2 495 aa12.21□□□□□ -0.45
NUP50-216ENST00000486184 DPH6Q7L8W6 267 aa12.21□□□□□ -0.45
NUP50-216ENST00000486184 GPR65Q8IYL9 337 aa12.21□□□□□ -0.45
NUP50-216ENST00000486184 ADGRF2Q8IZF7 708 aa12.21□□□□□ -0.45
NUP50-216ENST00000486184 PIK3R5Q8WYR1 880 aa12.21□□□□□ -0.45
NUP50-216ENST00000486184 NT5C1BQ96P26 610 aa12.21□□□□□ -0.45
NUP50-216ENST00000486184 PI4K2AQ9BTU6 479 aa12.21□□□□□ -0.45
NUP50-216ENST00000486184 OXCT2Q9BYC2 517 aaPredicted RBP12.21□□□□□ -0.45
NUP50-216ENST00000486184 DNAI2Q9GZS0 605 aa12.21□□□□□ -0.45
NUP50-216ENST00000486184 NIF3L1Q9GZT8 377 aa12.21□□□□□ -0.45
NUP50-216ENST00000486184 VPS16Q9H269 839 aa12.21□□□□□ -0.45
NUP50-216ENST00000486184 SNX25Q9H3E2 840 aa12.21□□□□□ -0.45
NUP50-216ENST00000486184 VRTNQ9H8Y1 702 aa12.21□□□□□ -0.45
NUP50-216ENST00000486184 CHST7Q9NS84 486 aa12.21□□□□□ -0.45
NUP50-216ENST00000486184 LIMA1Q9UHB6 759 aaKnown RBP12.21□□□□□ -0.45
NUP50-216ENST00000486184 MYH10P35580 1976 aa12.2□□□□□ -0.46
NUP50-216ENST00000486184 CHD9Q3L8U1 2897 aa12.2□□□□□ -0.46
NUP50-216ENST00000486184 GTPBP10A4D1E9 387 aaKnown RBP12.2□□□□□ -0.46
NUP50-216ENST00000486184 C2orf71A6NGG8 1288 aa12.2□□□□□ -0.46
NUP50-216ENST00000486184 CYP11A1P05108 521 aa12.2□□□□□ -0.46
NUP50-216ENST00000486184 SRGAP2BP0DMP2 458 aa12.2□□□□□ -0.46
NUP50-216ENST00000486184 ZNF18P17022 549 aa12.2□□□□□ -0.46
NUP50-216ENST00000486184 KLRC2P26717 231 aa12.2□□□□□ -0.46
NUP50-216ENST00000486184 LHX1P48742 406 aa12.2□□□□□ -0.46
NUP50-216ENST00000486184 COPB1P53618 953 aaKnown RBP12.2□□□□□ -0.46
NUP50-216ENST00000486184 YWHAEP62258 255 aaKnown RBP12.2□□□□□ -0.46
NUP50-216ENST00000486184 LRMPQ12912 555 aa12.2□□□□□ -0.46
NUP50-216ENST00000486184 CAMK1Q14012 370 aa12.2□□□□□ -0.46
NUP50-216ENST00000486184 KIAA0319Q5VV43 1072 aa12.2□□□□□ -0.46
NUP50-216ENST00000486184 WSCD1Q658N2 575 aa12.2□□□□□ -0.46
NUP50-216ENST00000486184 SCARA3Q6AZY7 606 aa12.2□□□□□ -0.46
NUP50-216ENST00000486184 SPOPLQ6IQ16 392 aa12.2□□□□□ -0.46
NUP50-216ENST00000486184 RBM23Q86U06 439 aaKnown RBP12.2□□□□□ -0.46
NUP50-216ENST00000486184 GLYCTKQ8IVS8 523 aa12.2□□□□□ -0.46
NUP50-216ENST00000486184 PDCL2Q8N4E4 241 aa12.2□□□□□ -0.46
NUP50-216ENST00000486184 MRPL43Q8N983 215 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms