RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 SMG9Q9H0W8 520 aaKnown RBP3.16□□□□□ -1.9
HMGN4-202ENST00000477243 ASCC2Q9H1I8 757 aaPredicted RBP3.16□□□□□ -1.9
HMGN4-202ENST00000477243 MS4A5Q9H3V2 200 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 ARMT1Q9H993 441 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 EPB41L4AQ9HCS5 686 aaPredicted RBP3.16□□□□□ -1.9
HMGN4-202ENST00000477243 SARS2Q9NP81 518 aaKnown RBP3.16□□□□□ -1.9
HMGN4-202ENST00000477243 INTS10Q9NVR2 710 aaKnown RBP3.16□□□□□ -1.9
HMGN4-202ENST00000477243 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.16□□□□□ -1.9
HMGN4-202ENST00000477243 PI4KBQ9UBF8 816 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 AFF4Q9UHB7 1163 aaKnown RBP3.16□□□□□ -1.9
HMGN4-202ENST00000477243 SH3BGRL2Q9UJC5 107 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 FEM1BQ9UK73 627 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 FAM184BQ9ULE4 1060 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 DUSP12Q9UNI6 340 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 HDAC5Q9UQL6 1122 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 KIF3AQ9Y496 699 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 PCDHA2Q9Y5H9 948 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 CYP46A1Q9Y6A2 500 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 SPEGQ15772 3267 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 TEX15Q9BXT5 2789 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 NUP188Q5SRE5 1749 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 NCOR2Q9Y618 2525 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 A2ML1A8K2U0 1454 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 KDM5AP29375 1690 aaKnown RBP3.15□□□□□ -1.9
HMGN4-202ENST00000477243 FAM205CA6NFA0 338 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 CLCA1A8K7I4 914 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 F8W8V4 182 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 DDX39AO00148 427 aaKnown RBP3.15□□□□□ -1.91
HMGN4-202ENST00000477243 WDR46O15213 610 aaKnown RBP3.15□□□□□ -1.91
HMGN4-202ENST00000477243 SIGLEC6O43699 453 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 GFRA3O60609 400 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 CLASP2O75122 1294 aaKnown RBP3.15□□□□□ -1.91
HMGN4-202ENST00000477243 ERAL1O75616 437 aaKnown RBP3.15□□□□□ -1.91
HMGN4-202ENST00000477243 BEST1O76090 585 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 USP1O94782 785 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 LRIG2O94898 1065 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 ECEL1O95672 775 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 GUCA1CO95843 209 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 LCP1P13796 627 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 PLS3P13797 630 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 CPB1P15086 417 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 KRT15P19012 456 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 EPHA1P21709 976 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 CTSSP25774 331 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 TCF7P36402 384 aaPredicted RBP3.15□□□□□ -1.91
HMGN4-202ENST00000477243 ADH7P40394 386 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 MLH1P40692 756 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 PRPHP41219 470 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 CD86P42081 329 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 FNTBP49356 437 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 CCR5P51681 352 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 SH3BGRP55822 239 aaPredicted RBP3.15□□□□□ -1.91
HMGN4-202ENST00000477243 JAM2P57087 298 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 NKX6-1P78426 367 aaPredicted RBP3.15□□□□□ -1.91
HMGN4-202ENST00000477243 IL1RL1Q01638 556 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 MC1RQ01726 317 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 PPARDQ03181 441 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 AIMP1Q12904 312 aaKnown RBP3.15□□□□□ -1.91
HMGN4-202ENST00000477243 SLBPQ14493 270 aaKnown RBP eCLIP3.15□□□□□ -1.91
HMGN4-202ENST00000477243 NKG7Q16617 165 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 IFI16Q16666 785 aaKnown RBP3.15□□□□□ -1.91
HMGN4-202ENST00000477243 C2orf76Q3KRA6 126 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 ANKDD1AQ495B1 522 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 MMEL1Q495T6 779 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 FLYWCH1Q4VC44 716 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 SLC44A4Q53GD3 710 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 MUM1L1Q5H9M0 696 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 PITRM1Q5JRX3 1037 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 KAZNQ674X7 775 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 SULT6B1Q6IMI4 303 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 INTS5Q6P9B9 1019 aaKnown RBP3.15□□□□□ -1.91
HMGN4-202ENST00000477243 CRTC1Q6UUV9 634 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 ARHGAP36Q6ZRI8 547 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 BBS12Q6ZW61 710 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 RNF44Q7L0R7 432 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 RAB44Q7Z6P3 723 aaPredicted RBP3.15□□□□□ -1.91
HMGN4-202ENST00000477243 DNAJB7Q7Z6W7 309 aaPredicted RBP3.15□□□□□ -1.91
HMGN4-202ENST00000477243 CPLX4Q7Z7G2 160 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 SLFN11Q7Z7L1 901 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 CCDC103Q8IW40 242 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 SLC44A2Q8IWA5 706 aaPredicted RBP3.15□□□□□ -1.91
HMGN4-202ENST00000477243 CCDC105Q8IYK2 499 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 ZNF619Q8N2I2 560 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 TMEM57Q8N5G2 664 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 NAT8LQ8N9F0 302 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 KCTD6Q8NC69 237 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 ANKRD20A12PQ8NF67 263 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 OR6Y1Q8NGX8 325 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 PLBD2Q8NHP8 589 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 PPP1R14CQ8TAE6 165 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 FBXO30Q8TB52 745 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 DENND1AQ8TEH3 1009 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 PPP1R13LQ8WUF5 828 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 NRG4Q8WWG1 115 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 RTF1Q92541 710 aaKnown RBP3.15□□□□□ -1.91
HMGN4-202ENST00000477243 DLG3Q92796 817 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 KCTD12Q96CX2 325 aaKnown RBP3.15□□□□□ -1.91
HMGN4-202ENST00000477243 RNF125Q96EQ8 232 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 SNX22Q96L94 193 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 C16orf92Q96LL3 132 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms