RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 PLCB2Q00722 1185 aa20.7■□□□□ 0.9
NCKIPSD-209ENST00000470006 GRSF1Q12849 480 aaKnown RBP eCLIP20.7■□□□□ 0.9
NCKIPSD-209ENST00000470006 ACAP1Q15027 740 aa20.7■□□□□ 0.9
NCKIPSD-209ENST00000470006 ITPRIPL2Q3MIP1 535 aa20.7■□□□□ 0.9
NCKIPSD-209ENST00000470006 PLA2G2CQ5R387 149 aa20.7■□□□□ 0.9
NCKIPSD-209ENST00000470006 PKN3Q6P5Z2 889 aa20.7■□□□□ 0.9
NCKIPSD-209ENST00000470006 BPIFB1Q8TDL5 484 aa20.7■□□□□ 0.9
NCKIPSD-209ENST00000470006 TARS2Q9BW92 718 aaKnown RBP20.7■□□□□ 0.9
NCKIPSD-209ENST00000470006 LRRC3Q9BY71 257 aa20.7■□□□□ 0.9
NCKIPSD-209ENST00000470006 CNTN3Q9P232 1028 aa20.7■□□□□ 0.9
NCKIPSD-209ENST00000470006 TPCN1Q9ULQ1 816 aa20.7■□□□□ 0.9
NCKIPSD-209ENST00000470006 ZFYVE26Q68DK2 2539 aa20.7■□□□□ 0.9
NCKIPSD-209ENST00000470006 CCDC163A0A0D9SF12 145 aa20.69■□□□□ 0.9
NCKIPSD-209ENST00000470006 C4orf47A7E2U8 309 aa20.69■□□□□ 0.9
NCKIPSD-209ENST00000470006 GIPC1O14908 333 aa20.69■□□□□ 0.9
NCKIPSD-209ENST00000470006 PFKFB2O60825 505 aa20.69■□□□□ 0.9
NCKIPSD-209ENST00000470006 MCF2P10911 925 aa20.69■□□□□ 0.9
NCKIPSD-209ENST00000470006 SPINK2P20155 84 aa20.69■□□□□ 0.9
NCKIPSD-209ENST00000470006 GABRR2P28476 465 aa20.69■□□□□ 0.9
NCKIPSD-209ENST00000470006 PEX3P56589 373 aa20.69■□□□□ 0.9
NCKIPSD-209ENST00000470006 CREB5Q02930 508 aa20.69■□□□□ 0.9
NCKIPSD-209ENST00000470006 ZNF252P-AS1Q0IIN9 211 aa20.69■□□□□ 0.9
NCKIPSD-209ENST00000470006 TRIM29Q14134 588 aa20.69■□□□□ 0.9
NCKIPSD-209ENST00000470006 DAB2IPQ5VWQ8 1189 aa20.69■□□□□ 0.9
NCKIPSD-209ENST00000470006 DNAJB7Q7Z6W7 309 aaPredicted RBP20.69■□□□□ 0.9
NCKIPSD-209ENST00000470006 DIS3L2Q8IYB7 885 aaKnown RBP20.69■□□□□ 0.9
NCKIPSD-209ENST00000470006 DNAJC25Q9H1X3 360 aa20.69■□□□□ 0.9
NCKIPSD-209ENST00000470006 BHMT2Q9H2M3 363 aa20.69■□□□□ 0.9
NCKIPSD-209ENST00000470006 PHLPP2Q6ZVD8 1323 aa20.69■□□□□ 0.9
NCKIPSD-209ENST00000470006 IGF2RP11717 2491 aa20.69■□□□□ 0.9
NCKIPSD-209ENST00000470006 ZZEF1O43149 2961 aa20.69■□□□□ 0.9
NCKIPSD-209ENST00000470006 NUP210Q8TEM1 1887 aaPredicted RBP20.69■□□□□ 0.9
NCKIPSD-209ENST00000470006 ANKRD11Q6UB99 2663 aaPredicted RBP20.68■□□□□ 0.9
NCKIPSD-209ENST00000470006 AKAP3O75969 853 aa20.68■□□□□ 0.9
NCKIPSD-209ENST00000470006 CTDNEP1O95476 244 aa20.68■□□□□ 0.9
NCKIPSD-209ENST00000470006 FGF19O95750 216 aa20.68■□□□□ 0.9
NCKIPSD-209ENST00000470006 ELF2Q15723 593 aa20.68■□□□□ 0.9
NCKIPSD-209ENST00000470006 ZC3H10Q96K80 434 aaKnown RBP20.68■□□□□ 0.9
NCKIPSD-209ENST00000470006 CRISPLD1Q9H336 500 aa20.68■□□□□ 0.9
NCKIPSD-209ENST00000470006 OBP2AQ9NY56 170 aa20.68■□□□□ 0.9
NCKIPSD-209ENST00000470006 ASB3Q9Y575 518 aa20.68■□□□□ 0.9
NCKIPSD-209ENST00000470006 ASPMQ8IZT6 3477 aa20.68■□□□□ 0.9
NCKIPSD-209ENST00000470006 RHOBTB1O94844 696 aa20.67■□□□□ 0.9
NCKIPSD-209ENST00000470006 CCT6AP40227 531 aaKnown RBP20.67■□□□□ 0.9
NCKIPSD-209ENST00000470006 TAF12Q16514 161 aa20.67■□□□□ 0.9
NCKIPSD-209ENST00000470006 PLK5Q496M5 336 aa20.67■□□□□ 0.9
NCKIPSD-209ENST00000470006 MPZL3Q6UWV2 235 aa20.67■□□□□ 0.9
NCKIPSD-209ENST00000470006 DSTYKQ6XUX3 929 aa20.67■□□□□ 0.9
NCKIPSD-209ENST00000470006 GAREM2Q75VX8 874 aa20.67■□□□□ 0.9
NCKIPSD-209ENST00000470006 ITIH5Q86UX2 942 aa20.67■□□□□ 0.9
NCKIPSD-209ENST00000470006 BEST2Q8NFU1 509 aa20.67■□□□□ 0.9
NCKIPSD-209ENST00000470006 GCNAQ96QF7 691 aa20.67■□□□□ 0.9
NCKIPSD-209ENST00000470006 HHIPQ96QV1 700 aa20.67■□□□□ 0.9
NCKIPSD-209ENST00000470006 OXCT2Q9BYC2 517 aaPredicted RBP20.67■□□□□ 0.9
NCKIPSD-209ENST00000470006 PTPRHQ9HD43 1115 aa20.67■□□□□ 0.9
NCKIPSD-209ENST00000470006 KMT5AQ9NQR1 393 aa20.67■□□□□ 0.9
NCKIPSD-209ENST00000470006 GKN1Q9NS71 199 aa20.67■□□□□ 0.9
NCKIPSD-209ENST00000470006 TUBGCP4Q9UGJ1 667 aa20.67■□□□□ 0.9
NCKIPSD-209ENST00000470006 EML5Q05BV3 1969 aa20.66■□□□□ 0.9
NCKIPSD-209ENST00000470006 OR6C75A6NL08 312 aa20.66■□□□□ 0.9
NCKIPSD-209ENST00000470006 SOAT2O75908 522 aa20.66■□□□□ 0.9
NCKIPSD-209ENST00000470006 OAZ2O95190 189 aa20.66■□□□□ 0.9
NCKIPSD-209ENST00000470006 VNN2O95498 520 aa20.66■□□□□ 0.9
NCKIPSD-209ENST00000470006 PRAMEF12O95522 483 aa20.66■□□□□ 0.9
NCKIPSD-209ENST00000470006 CAVIN2O95810 425 aa20.66■□□□□ 0.9
NCKIPSD-209ENST00000470006 MATR3P43243 847 aaKnown RBP eCLIP20.66■□□□□ 0.9
NCKIPSD-209ENST00000470006 NPTX2P47972 431 aa20.66■□□□□ 0.9
NCKIPSD-209ENST00000470006 MCM2P49736 904 aa20.66■□□□□ 0.9
NCKIPSD-209ENST00000470006 CYP4F8P98187 520 aa20.66■□□□□ 0.9
NCKIPSD-209ENST00000470006 CACNB1Q02641 598 aaPredicted RBP20.66■□□□□ 0.9
NCKIPSD-209ENST00000470006 GPR17Q13304 367 aa20.66■□□□□ 0.9
NCKIPSD-209ENST00000470006 DMP1Q13316 513 aaPredicted RBP20.66■□□□□ 0.9
NCKIPSD-209ENST00000470006 SEZ6Q53EL9 994 aa20.66■□□□□ 0.9
NCKIPSD-209ENST00000470006 SH3PXD2AQ5TCZ1 1133 aa20.66■□□□□ 0.9
NCKIPSD-209ENST00000470006 HAUS3Q68CZ6 603 aa20.66■□□□□ 0.9
NCKIPSD-209ENST00000470006 CAMKK1Q8N5S9 505 aa20.66■□□□□ 0.9
NCKIPSD-209ENST00000470006 KDF1Q8NAX2 398 aaPredicted RBP20.66■□□□□ 0.9
NCKIPSD-209ENST00000470006 ATAD1Q8NBU5 361 aa20.66■□□□□ 0.9
NCKIPSD-209ENST00000470006 PSMG2Q969U7 264 aa20.66■□□□□ 0.9
NCKIPSD-209ENST00000470006 MKNK1Q9BUB5 465 aa20.66■□□□□ 0.9
NCKIPSD-209ENST00000470006 SMG9Q9H0W8 520 aaKnown RBP20.66■□□□□ 0.9
NCKIPSD-209ENST00000470006 TMEM134Q9H6X4 195 aa20.66■□□□□ 0.9
NCKIPSD-209ENST00000470006 POLR3BQ9NW08 1133 aaPredicted RBP20.66■□□□□ 0.9
NCKIPSD-209ENST00000470006 ANKFY1Q9P2R3 1169 aa20.66■□□□□ 0.9
NCKIPSD-209ENST00000470006 RNF40O75150 1001 aa20.65■□□□□ 0.9
NCKIPSD-209ENST00000470006 FDPSP14324 419 aaKnown RBP20.65■□□□□ 0.9
NCKIPSD-209ENST00000470006 GBP1P32455 592 aa20.65■□□□□ 0.9
NCKIPSD-209ENST00000470006 SPAG1Q07617 926 aa20.65■□□□□ 0.9
NCKIPSD-209ENST00000470006 CENPPQ6IPU0 288 aa20.65■□□□□ 0.9
NCKIPSD-209ENST00000470006 FSTL4Q6MZW2 842 aa20.65■□□□□ 0.9
NCKIPSD-209ENST00000470006 ARMCX5Q6P1M9 558 aa20.65■□□□□ 0.9
NCKIPSD-209ENST00000470006 ZBTB45Q96K62 511 aaPredicted RBP20.65■□□□□ 0.9
NCKIPSD-209ENST00000470006 ADAM33Q9BZ11 813 aa20.65■□□□□ 0.9
NCKIPSD-209ENST00000470006 DUSP15Q9H1R2 295 aaPredicted RBP20.65■□□□□ 0.9
NCKIPSD-209ENST00000470006 TASP1Q9H6P5 420 aa20.65■□□□□ 0.9
NCKIPSD-209ENST00000470006 KIAA1024Q9UPX6 916 aa20.65■□□□□ 0.9
NCKIPSD-209ENST00000470006 FASNP49327 2511 aaKnown RBP20.65■□□□□ 0.9
NCKIPSD-209ENST00000470006 M0QZQ0 153 aa20.64■□□□□ 0.89
NCKIPSD-209ENST00000470006 DCLK1O15075 740 aa20.64■□□□□ 0.89
NCKIPSD-209ENST00000470006 OR52Z1P0C646 297 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms