RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 FAM81BQ96LP2 452 aa6.85□□□□□ -1.31
SF3B1-206ENST00000462613 GUCD1Q96NT3 240 aa6.85□□□□□ -1.31
SF3B1-206ENST00000462613 BPIFA3Q9BQP9 254 aa6.85□□□□□ -1.31
SF3B1-206ENST00000462613 SNX25Q9H3E2 840 aa6.85□□□□□ -1.31
SF3B1-206ENST00000462613 IGFLR1Q9H665 355 aa6.85□□□□□ -1.31
SF3B1-206ENST00000462613 CHST7Q9NS84 486 aa6.85□□□□□ -1.31
SF3B1-206ENST00000462613 GDAP2Q9NXN4 497 aa6.85□□□□□ -1.31
SF3B1-206ENST00000462613 NXF1Q9UBU9 619 aaKnown RBP6.85□□□□□ -1.31
SF3B1-206ENST00000462613 FAM50BQ9Y247 325 aa6.85□□□□□ -1.31
SF3B1-206ENST00000462613 PTPRDP23468 1912 aa6.85□□□□□ -1.31
SF3B1-206ENST00000462613 PTPRJQ12913 1337 aa6.84□□□□□ -1.31
SF3B1-206ENST00000462613 C2orf71A6NGG8 1288 aa6.84□□□□□ -1.31
SF3B1-206ENST00000462613 KCNJ18B7U540 433 aa6.84□□□□□ -1.31
SF3B1-206ENST00000462613 F8W810 466 aa6.84□□□□□ -1.31
SF3B1-206ENST00000462613 I3L4J1 428 aa6.84□□□□□ -1.31
SF3B1-206ENST00000462613 FSCN2O14926 492 aa6.84□□□□□ -1.31
SF3B1-206ENST00000462613 C1RP00736 705 aa6.84□□□□□ -1.31
SF3B1-206ENST00000462613 HLA-DRAP01903 254 aa6.84□□□□□ -1.31
SF3B1-206ENST00000462613 C4BPAP04003 597 aaKnown RBP6.84□□□□□ -1.31
SF3B1-206ENST00000462613 CYP11A1P05108 521 aa6.84□□□□□ -1.31
SF3B1-206ENST00000462613 FAM163BP0C2L3 166 aa6.84□□□□□ -1.31
SF3B1-206ENST00000462613 TBXAS1P24557 533 aaPredicted RBP6.84□□□□□ -1.31
SF3B1-206ENST00000462613 IRS1P35568 1242 aa6.84□□□□□ -1.31
SF3B1-206ENST00000462613 FMO5P49326 533 aa6.84□□□□□ -1.31
SF3B1-206ENST00000462613 AARSP49588 968 aaKnown RBP eCLIP6.84□□□□□ -1.31
SF3B1-206ENST00000462613 ARPP19P56211 112 aa6.84□□□□□ -1.31
SF3B1-206ENST00000462613 WNT7BP56706 349 aa6.84□□□□□ -1.31
SF3B1-206ENST00000462613 MYL6P60660 151 aa6.84□□□□□ -1.31
SF3B1-206ENST00000462613 NOP14P78316 857 aaKnown RBP6.84□□□□□ -1.31
SF3B1-206ENST00000462613 DLG4P78352 724 aa6.84□□□□□ -1.31
SF3B1-206ENST00000462613 KCNH2Q12809 1159 aa6.84□□□□□ -1.31
SF3B1-206ENST00000462613 SMARCB1Q12824 385 aa6.84□□□□□ -1.31
SF3B1-206ENST00000462613 KCNJ12Q14500 433 aa6.84□□□□□ -1.31
SF3B1-206ENST00000462613 MAPRE1Q15691 268 aaKnown RBP6.84□□□□□ -1.31
SF3B1-206ENST00000462613 CCDC85BQ15834 202 aaPredicted RBP6.84□□□□□ -1.31
SF3B1-206ENST00000462613 NFE2Q16621 373 aaPredicted RBP6.84□□□□□ -1.31
SF3B1-206ENST00000462613 DUSP6Q16828 381 aa6.84□□□□□ -1.31
SF3B1-206ENST00000462613 TCEAL5Q5H9L2 206 aa6.84□□□□□ -1.31
SF3B1-206ENST00000462613 RTP2Q5QGT7 225 aa6.84□□□□□ -1.31
SF3B1-206ENST00000462613 FKBP15Q5T1M5 1219 aa6.84□□□□□ -1.31
SF3B1-206ENST00000462613 KIAA0319Q5VV43 1072 aa6.84□□□□□ -1.31
SF3B1-206ENST00000462613 TPGS2Q68CL5 300 aa6.84□□□□□ -1.31
SF3B1-206ENST00000462613 GBP6Q6ZN66 633 aa6.84□□□□□ -1.31
SF3B1-206ENST00000462613 CCDC149Q6ZUS6 474 aa6.84□□□□□ -1.31
SF3B1-206ENST00000462613 RTL10Q7L3V2 364 aa6.84□□□□□ -1.31
SF3B1-206ENST00000462613 RBM23Q86U06 439 aaKnown RBP6.84□□□□□ -1.31
SF3B1-206ENST00000462613 GLYCTKQ8IVS8 523 aa6.84□□□□□ -1.31
SF3B1-206ENST00000462613 TRIM59Q8IWR1 403 aa6.84□□□□□ -1.31
SF3B1-206ENST00000462613 ADGRF2Q8IZF7 708 aa6.84□□□□□ -1.31
SF3B1-206ENST00000462613 AOPEPQ8N6M6 819 aa6.84□□□□□ -1.31
SF3B1-206ENST00000462613 OR6B3Q8NGW1 331 aa6.84□□□□□ -1.31
SF3B1-206ENST00000462613 BCL7CQ8WUZ0 217 aaPredicted RBP6.84□□□□□ -1.31
SF3B1-206ENST00000462613 SLC35C1Q96A29 364 aa6.84□□□□□ -1.31
SF3B1-206ENST00000462613 TNIP3Q96KP6 325 aa6.84□□□□□ -1.31
SF3B1-206ENST00000462613 NT5C1BQ96P26 610 aa6.84□□□□□ -1.31
SF3B1-206ENST00000462613 TUBGCP2Q9BSJ2 902 aa6.84□□□□□ -1.31
SF3B1-206ENST00000462613 TSPY26PQ9H489 355 aa6.84□□□□□ -1.31
SF3B1-206ENST00000462613 PLEKHA4Q9H4M7 779 aa6.84□□□□□ -1.31
SF3B1-206ENST00000462613 FAM124BQ9H5Z6 455 aaPredicted RBP6.84□□□□□ -1.31
SF3B1-206ENST00000462613 VRTNQ9H8Y1 702 aa6.84□□□□□ -1.31
SF3B1-206ENST00000462613 DZANK1Q9NVP4 752 aa6.84□□□□□ -1.31
SF3B1-206ENST00000462613 RAB20Q9NX57 234 aa6.84□□□□□ -1.31
SF3B1-206ENST00000462613 CLDND1Q9NY35 253 aa6.84□□□□□ -1.31
SF3B1-206ENST00000462613 MTRRQ9UBK8 725 aa6.84□□□□□ -1.31
SF3B1-206ENST00000462613 SIX4Q9UIU6 781 aa6.84□□□□□ -1.31
SF3B1-206ENST00000462613 MAFFQ9ULX9 164 aa6.84□□□□□ -1.31
SF3B1-206ENST00000462613 COG5Q9UP83 839 aa6.84□□□□□ -1.31
SF3B1-206ENST00000462613 BACE2Q9Y5Z0 518 aa6.84□□□□□ -1.31
SF3B1-206ENST00000462613 CDY1Q9Y6F8 540 aa6.84□□□□□ -1.31
SF3B1-206ENST00000462613 TRANK1O15050 2925 aa6.84□□□□□ -1.31
SF3B1-206ENST00000462613 C2orf16Q68DN1 1984 aa6.84□□□□□ -1.32
SF3B1-206ENST00000462613 BRWD1Q9NSI6 2320 aa6.83□□□□□ -1.32
SF3B1-206ENST00000462613 ATP8B3O60423 1300 aa6.83□□□□□ -1.32
SF3B1-206ENST00000462613 GTPBP10A4D1E9 387 aaKnown RBP6.83□□□□□ -1.32
SF3B1-206ENST00000462613 HIDE1A8MVS5 230 aa6.83□□□□□ -1.32
SF3B1-206ENST00000462613 PRRG1O14668 218 aa6.83□□□□□ -1.32
SF3B1-206ENST00000462613 PPEF2O14830 753 aa6.83□□□□□ -1.32
SF3B1-206ENST00000462613 PMM2O15305 246 aa6.83□□□□□ -1.32
SF3B1-206ENST00000462613 TEX28O15482 410 aa6.83□□□□□ -1.32
SF3B1-206ENST00000462613 OAZ2O95190 189 aa6.83□□□□□ -1.32
SF3B1-206ENST00000462613 ASS1P00966 412 aaKnown RBP6.83□□□□□ -1.32
SF3B1-206ENST00000462613 CST3P01034 146 aaPredicted RBP6.83□□□□□ -1.32
SF3B1-206ENST00000462613 TPM3P06753 285 aa6.83□□□□□ -1.32
SF3B1-206ENST00000462613 CNPP09543 421 aaKnown RBP6.83□□□□□ -1.32
SF3B1-206ENST00000462613 HOXB8P17481 243 aaPredicted RBP6.83□□□□□ -1.32
SF3B1-206ENST00000462613 DNAJB1P25685 340 aa6.83□□□□□ -1.32
SF3B1-206ENST00000462613 OR1D2P34982 312 aa6.83□□□□□ -1.32
SF3B1-206ENST00000462613 GNL1P36915 607 aaPredicted RBP6.83□□□□□ -1.32
SF3B1-206ENST00000462613 PPP3CAQ08209 521 aa6.83□□□□□ -1.32
SF3B1-206ENST00000462613 PLD1Q13393 1074 aa6.83□□□□□ -1.32
SF3B1-206ENST00000462613 CAMK1Q14012 370 aa6.83□□□□□ -1.32
SF3B1-206ENST00000462613 ADGRE1Q14246 886 aa6.83□□□□□ -1.32
SF3B1-206ENST00000462613 EXOC3L4Q17RC7 722 aa6.83□□□□□ -1.32
SF3B1-206ENST00000462613 VWA3BQ502W6 1294 aa6.83□□□□□ -1.32
SF3B1-206ENST00000462613 HSP90AA4PQ58FG1 418 aa6.83□□□□□ -1.32
SF3B1-206ENST00000462613 TCP11X2Q5H9J9 407 aa6.83□□□□□ -1.32
SF3B1-206ENST00000462613 WSCD1Q658N2 575 aa6.83□□□□□ -1.32
SF3B1-206ENST00000462613 CES5AQ6NT32 575 aa6.83□□□□□ -1.32
SF3B1-206ENST00000462613 PRSS55Q6UWB4 352 aaPredicted RBP6.83□□□□□ -1.32
SF3B1-206ENST00000462613 C4orf50Q6ZRC1 276 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms