RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 KYAT3Q6YP21 454 aaKnown RBP11.3□□□□□ -0.6
LINC00342-202ENST00000448494 FRA10AC1Q70Z53 315 aa11.3□□□□□ -0.6
LINC00342-202ENST00000448494 NLRX1Q86UT6 975 aa11.3□□□□□ -0.6
LINC00342-202ENST00000448494 NME9Q86XW9 330 aa11.3□□□□□ -0.6
LINC00342-202ENST00000448494 CLVS1Q8IUQ0 354 aaPredicted RBP11.3□□□□□ -0.6
LINC00342-202ENST00000448494 SNX29Q8TEQ0 813 aa11.3□□□□□ -0.6
LINC00342-202ENST00000448494 PHKBQ93100 1093 aa11.3□□□□□ -0.6
LINC00342-202ENST00000448494 HES6Q96HZ4 224 aa11.3□□□□□ -0.6
LINC00342-202ENST00000448494 CAAP1Q9H8G2 361 aa11.3□□□□□ -0.6
LINC00342-202ENST00000448494 MARCH7Q9H992 704 aa11.3□□□□□ -0.6
LINC00342-202ENST00000448494 GPRC5DQ9NZD1 345 aa11.3□□□□□ -0.6
LINC00342-202ENST00000448494 RAB26Q9ULW5 256 aa11.3□□□□□ -0.6
LINC00342-202ENST00000448494 ANGPTL3Q9Y5C1 460 aa11.3□□□□□ -0.6
LINC00342-202ENST00000448494 ATP8B3O60423 1300 aa11.29□□□□□ -0.6
LINC00342-202ENST00000448494 LINC00854A0A1B0GVQ3 168 aa11.29□□□□□ -0.6
LINC00342-202ENST00000448494 KRBA1A5PL33 1030 aa11.29□□□□□ -0.6
LINC00342-202ENST00000448494 KLRF2D3W0D1 207 aa11.29□□□□□ -0.6
LINC00342-202ENST00000448494 PODXLO00592 558 aa11.29□□□□□ -0.6
LINC00342-202ENST00000448494 KPNA4O00629 521 aaPredicted RBP11.29□□□□□ -0.6
LINC00342-202ENST00000448494 EPHB6O15197 1021 aa11.29□□□□□ -0.6
LINC00342-202ENST00000448494 B3GALNT1O75752 331 aa11.29□□□□□ -0.6
LINC00342-202ENST00000448494 STAMBPO95630 424 aa11.29□□□□□ -0.6
LINC00342-202ENST00000448494 ZNF23P17027 643 aa11.29□□□□□ -0.6
LINC00342-202ENST00000448494 PMLP29590 882 aa11.29□□□□□ -0.6
LINC00342-202ENST00000448494 PRDX6P30041 224 aa11.29□□□□□ -0.6
LINC00342-202ENST00000448494 FDFT1P37268 417 aa11.29□□□□□ -0.6
LINC00342-202ENST00000448494 WDR4P57081 412 aaKnown RBP11.29□□□□□ -0.6
LINC00342-202ENST00000448494 ADAM17P78536 824 aa11.29□□□□□ -0.6
LINC00342-202ENST00000448494 CDK18Q07002 472 aa11.29□□□□□ -0.6
LINC00342-202ENST00000448494 CD300CQ08708 224 aa11.29□□□□□ -0.6
LINC00342-202ENST00000448494 SSRP1Q08945 709 aaKnown RBP11.29□□□□□ -0.6
LINC00342-202ENST00000448494 ATP1A4Q13733 1029 aa11.29□□□□□ -0.6
LINC00342-202ENST00000448494 TLR1Q15399 786 aa11.29□□□□□ -0.6
LINC00342-202ENST00000448494 RABL6Q3YEC7 729 aaPredicted RBP11.29□□□□□ -0.6
LINC00342-202ENST00000448494 RALYLQ86SE5 291 aaKnown RBP11.29□□□□□ -0.6
LINC00342-202ENST00000448494 JAMLQ86YT9 394 aa11.29□□□□□ -0.6
LINC00342-202ENST00000448494 NATD1Q8N6N6 113 aa11.29□□□□□ -0.6
LINC00342-202ENST00000448494 LINC00469Q8N7U9 141 aa11.29□□□□□ -0.6
LINC00342-202ENST00000448494 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.29□□□□□ -0.6
LINC00342-202ENST00000448494 TERB1Q8NA31 727 aa11.29□□□□□ -0.6
LINC00342-202ENST00000448494 TNIP2Q8NFZ5 429 aa11.29□□□□□ -0.6
LINC00342-202ENST00000448494 BRSK1Q8TDC3 778 aa11.29□□□□□ -0.6
LINC00342-202ENST00000448494 GDPD5Q8WTR4 605 aa11.29□□□□□ -0.6
LINC00342-202ENST00000448494 STAMQ92783 540 aa11.29□□□□□ -0.6
LINC00342-202ENST00000448494 TTC25Q96NG3 672 aa11.29□□□□□ -0.6
LINC00342-202ENST00000448494 UQCC2Q9BRT2 126 aa11.29□□□□□ -0.6
LINC00342-202ENST00000448494 TDRD1Q9BXT4 1180 aaKnown RBP11.29□□□□□ -0.6
LINC00342-202ENST00000448494 OLFML3Q9NRN5 406 aa11.29□□□□□ -0.6
LINC00342-202ENST00000448494 VPS51Q9UID3 782 aa11.29□□□□□ -0.6
LINC00342-202ENST00000448494 SNX24Q9Y343 169 aa11.29□□□□□ -0.6
LINC00342-202ENST00000448494 PCDHGA3Q9Y5H0 932 aa11.29□□□□□ -0.6
LINC00342-202ENST00000448494 NFAT5O94916 1531 aa11.29□□□□□ -0.6
LINC00342-202ENST00000448494 ACEP12821 1306 aa11.29□□□□□ -0.6
LINC00342-202ENST00000448494 E9PMD0 336 aa11.28□□□□□ -0.6
LINC00342-202ENST00000448494 SNX2O60749 519 aa11.28□□□□□ -0.6
LINC00342-202ENST00000448494 KLHL2O95198 593 aa11.28□□□□□ -0.6
LINC00342-202ENST00000448494 RBP3P10745 1247 aa11.28□□□□□ -0.6
LINC00342-202ENST00000448494 GLULP15104 373 aa11.28□□□□□ -0.6
LINC00342-202ENST00000448494 PPP1R2P41236 205 aa11.28□□□□□ -0.6
LINC00342-202ENST00000448494 ALDH3B2P48448 385 aa11.28□□□□□ -0.6
LINC00342-202ENST00000448494 IST1P53990 364 aa11.28□□□□□ -0.6
LINC00342-202ENST00000448494 B2MP61769 119 aa11.28□□□□□ -0.6
LINC00342-202ENST00000448494 MAPK7Q13164 816 aa11.28□□□□□ -0.6
LINC00342-202ENST00000448494 MAPK6Q16659 721 aa11.28□□□□□ -0.6
LINC00342-202ENST00000448494 INSCQ1MX18 579 aa11.28□□□□□ -0.6
LINC00342-202ENST00000448494 EPM2AIP1Q7L775 607 aaPredicted RBP11.28□□□□□ -0.6
LINC00342-202ENST00000448494 SLFN11Q7Z7L1 901 aa11.28□□□□□ -0.6
LINC00342-202ENST00000448494 RMDN1Q96DB5 314 aa11.28□□□□□ -0.6
LINC00342-202ENST00000448494 CFAP57Q96MR6 1250 aa11.28□□□□□ -0.6
LINC00342-202ENST00000448494 RANBP9Q96S59 729 aa11.28□□□□□ -0.6
LINC00342-202ENST00000448494 FAM207AQ9NSI2 230 aaPredicted RBP11.28□□□□□ -0.6
LINC00342-202ENST00000448494 ABCB11O95342 1321 aa11.28□□□□□ -0.6
LINC00342-202ENST00000448494 XIRP1Q702N8 1843 aaKnown RBP11.28□□□□□ -0.6
LINC00342-202ENST00000448494 MYH11P35749 1972 aa11.28□□□□□ -0.6
LINC00342-202ENST00000448494 GNPATO15228 680 aa11.28□□□□□ -0.6
LINC00342-202ENST00000448494 CLOCKO15516 846 aa11.28□□□□□ -0.6
LINC00342-202ENST00000448494 SGTAO43765 313 aa11.28□□□□□ -0.6
LINC00342-202ENST00000448494 MARCH6O60337 910 aa11.28□□□□□ -0.6
LINC00342-202ENST00000448494 FOXD2O60548 495 aaPredicted RBP11.28□□□□□ -0.6
LINC00342-202ENST00000448494 INHBBP09529 407 aa11.28□□□□□ -0.6
LINC00342-202ENST00000448494 PDE6AP16499 860 aa11.28□□□□□ -0.6
LINC00342-202ENST00000448494 JAK1P23458 1154 aa11.28□□□□□ -0.6
LINC00342-202ENST00000448494 BTKQ06187 659 aa11.28□□□□□ -0.6
LINC00342-202ENST00000448494 ACAP1Q15027 740 aa11.28□□□□□ -0.6
LINC00342-202ENST00000448494 DNAL1Q4LDG9 190 aa11.28□□□□□ -0.6
LINC00342-202ENST00000448494 UBAP2Q5T6F2 1119 aaKnown RBP11.28□□□□□ -0.6
LINC00342-202ENST00000448494 KIF6Q6ZMV9 814 aa11.28□□□□□ -0.6
LINC00342-202ENST00000448494 CYP4V2Q6ZWL3 525 aaPredicted RBP11.28□□□□□ -0.6
LINC00342-202ENST00000448494 SYCE1Q8N0S2 351 aa11.28□□□□□ -0.6
LINC00342-202ENST00000448494 TAMM41Q96BW9 452 aa11.28□□□□□ -0.6
LINC00342-202ENST00000448494 ZNF641Q96N77 438 aaPredicted RBP11.28□□□□□ -0.6
LINC00342-202ENST00000448494 FERMT1Q9BQL6 677 aa11.28□□□□□ -0.6
LINC00342-202ENST00000448494 EPS15L1Q9UBC2 864 aa11.28□□□□□ -0.6
LINC00342-202ENST00000448494 ERGIC3Q9Y282 383 aa11.28□□□□□ -0.6
LINC00342-202ENST00000448494 HEMK1Q9Y5R4 338 aaPredicted RBP11.28□□□□□ -0.6
LINC00342-202ENST00000448494 KCNJ13O60928 360 aa11.27□□□□□ -0.6
LINC00342-202ENST00000448494 IL32P24001 234 aa11.27□□□□□ -0.6
LINC00342-202ENST00000448494 CCNE1P24864 410 aa11.27□□□□□ -0.6
LINC00342-202ENST00000448494 ETFBP38117 255 aa11.27□□□□□ -0.6
LINC00342-202ENST00000448494 IFITM2Q01629 132 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms