RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 MMP8P22894 467 aa20.07■□□□□ 0.8
SEMA3D-202ENST00000444867 EIF4BP23588 611 aaKnown RBP20.07■□□□□ 0.8
SEMA3D-202ENST00000444867 TM4SF4P48230 202 aa20.07■□□□□ 0.8
SEMA3D-202ENST00000444867 MRPS25P82663 173 aaKnown RBP20.07■□□□□ 0.8
SEMA3D-202ENST00000444867 GABPB1Q06547 395 aaPredicted RBP20.07■□□□□ 0.8
SEMA3D-202ENST00000444867 CRHR2Q13324 411 aa20.07■□□□□ 0.8
SEMA3D-202ENST00000444867 SCARA5Q6ZMJ2 495 aa20.07■□□□□ 0.8
SEMA3D-202ENST00000444867 CATSPER4Q7RTX7 472 aa20.07■□□□□ 0.8
SEMA3D-202ENST00000444867 GSPT2Q8IYD1 628 aaKnown RBP20.07■□□□□ 0.8
SEMA3D-202ENST00000444867 DDX47Q9H0S4 455 aaKnown RBP20.07■□□□□ 0.8
SEMA3D-202ENST00000444867 NXF1Q9UBU9 619 aaKnown RBP20.07■□□□□ 0.8
SEMA3D-202ENST00000444867 POLIQ9UNA4 740 aa20.07■□□□□ 0.8
SEMA3D-202ENST00000444867 PDCD11Q14690 1871 aaKnown RBP20.07■□□□□ 0.8
SEMA3D-202ENST00000444867 ECM2O94769 699 aaPredicted RBP20.06■□□□□ 0.8
SEMA3D-202ENST00000444867 PROSCO94903 275 aa20.06■□□□□ 0.8
SEMA3D-202ENST00000444867 GNAT1P11488 350 aa20.06■□□□□ 0.8
SEMA3D-202ENST00000444867 BRD2P25440 801 aaKnown RBP20.06■□□□□ 0.8
SEMA3D-202ENST00000444867 MARCKSL1P49006 195 aa20.06■□□□□ 0.8
SEMA3D-202ENST00000444867 RBP5P82980 135 aa20.06■□□□□ 0.8
SEMA3D-202ENST00000444867 LACTBP83111 547 aaPredicted RBP20.06■□□□□ 0.8
SEMA3D-202ENST00000444867 ZNF211Q13398 564 aaPredicted RBP20.06■□□□□ 0.8
SEMA3D-202ENST00000444867 WDR72Q3MJ13 1102 aa20.06■□□□□ 0.8
SEMA3D-202ENST00000444867 NOTUMQ6P988 496 aa20.06■□□□□ 0.8
SEMA3D-202ENST00000444867 MMS22LQ6ZRQ5 1243 aa20.06■□□□□ 0.8
SEMA3D-202ENST00000444867 HPCAL4Q9UM19 191 aa20.06■□□□□ 0.8
SEMA3D-202ENST00000444867 CA12O43570 354 aa20.05■□□□□ 0.8
SEMA3D-202ENST00000444867 NPTXRO95502 500 aa20.05■□□□□ 0.8
SEMA3D-202ENST00000444867 HOXA11P31270 313 aaPredicted RBP20.05■□□□□ 0.8
SEMA3D-202ENST00000444867 MAN1A1P33908 653 aa20.05■□□□□ 0.8
SEMA3D-202ENST00000444867 AARSP49588 968 aaKnown RBP eCLIP20.05■□□□□ 0.8
SEMA3D-202ENST00000444867 APLP1P51693 650 aa20.05■□□□□ 0.8
SEMA3D-202ENST00000444867 TAP1Q03518 808 aa20.05■□□□□ 0.8
SEMA3D-202ENST00000444867 MAMLD1Q13495 774 aa20.05■□□□□ 0.8
SEMA3D-202ENST00000444867 FSCN1Q16658 493 aaKnown RBP20.05■□□□□ 0.8
SEMA3D-202ENST00000444867 SND1Q7KZF4 910 aaKnown RBP eCLIP20.05■□□□□ 0.8
SEMA3D-202ENST00000444867 NME8Q8N427 588 aa20.05■□□□□ 0.8
SEMA3D-202ENST00000444867 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.05■□□□□ 0.8
SEMA3D-202ENST00000444867 WHAMMQ8TF30 809 aa20.05■□□□□ 0.8
SEMA3D-202ENST00000444867 CASKIN2Q8WXE0 1202 aa20.05■□□□□ 0.8
SEMA3D-202ENST00000444867 LHX5Q9H2C1 402 aa20.05■□□□□ 0.8
SEMA3D-202ENST00000444867 MED4Q9NPJ6 270 aa20.05■□□□□ 0.8
SEMA3D-202ENST00000444867 DPP3Q9NY33 737 aa20.05■□□□□ 0.8
SEMA3D-202ENST00000444867 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.05■□□□□ 0.8
SEMA3D-202ENST00000444867 TRIP12Q14669 1992 aaPredicted RBP20.05■□□□□ 0.8
SEMA3D-202ENST00000444867 TRIP11Q15643 1979 aa20.05■□□□□ 0.8
SEMA3D-202ENST00000444867 TMEM88BA6NKF7 163 aa20.05■□□□□ 0.8
SEMA3D-202ENST00000444867 DUSP11O75319 330 aaKnown RBP20.05■□□□□ 0.8
SEMA3D-202ENST00000444867 OAS2P29728 719 aaKnown RBP20.05■□□□□ 0.8
SEMA3D-202ENST00000444867 POLR2BP30876 1174 aaKnown RBP20.05■□□□□ 0.8
SEMA3D-202ENST00000444867 CARSP49589 748 aaKnown RBP20.05■□□□□ 0.8
SEMA3D-202ENST00000444867 DHX34Q14147 1143 aaKnown RBP20.05■□□□□ 0.8
SEMA3D-202ENST00000444867 RUFY4Q6ZNE9 571 aa20.05■□□□□ 0.8
SEMA3D-202ENST00000444867 FEZF2Q8TBJ5 459 aa20.05■□□□□ 0.8
SEMA3D-202ENST00000444867 LENG1Q96BZ8 264 aaPredicted RBP20.05■□□□□ 0.8
SEMA3D-202ENST00000444867 HPDLQ96IR7 371 aa20.05■□□□□ 0.8
SEMA3D-202ENST00000444867 HHIPL1Q96JK4 782 aa20.05■□□□□ 0.8
SEMA3D-202ENST00000444867 RUNDC3BQ96NL0 473 aa20.05■□□□□ 0.8
SEMA3D-202ENST00000444867 MTUS1Q9ULD2 1270 aa20.05■□□□□ 0.8
SEMA3D-202ENST00000444867 C17orf102A2RUQ5 167 aa20.04■□□□□ 0.8
SEMA3D-202ENST00000444867 FAM187AA6NFU0 413 aa20.04■□□□□ 0.8
SEMA3D-202ENST00000444867 PHF2O75151 1096 aa20.04■□□□□ 0.8
SEMA3D-202ENST00000444867 PYGMP11217 842 aa20.04■□□□□ 0.8
SEMA3D-202ENST00000444867 FGFR4P22455 802 aa20.04■□□□□ 0.8
SEMA3D-202ENST00000444867 HOXC8P31273 242 aa20.04■□□□□ 0.8
SEMA3D-202ENST00000444867 CHRNA3P32297 505 aa20.04■□□□□ 0.8
SEMA3D-202ENST00000444867 YARSP54577 528 aaKnown RBP20.04■□□□□ 0.8
SEMA3D-202ENST00000444867 RAD23BP54727 409 aa20.04■□□□□ 0.8
SEMA3D-202ENST00000444867 FAM193AP78312 1265 aa20.04■□□□□ 0.8
SEMA3D-202ENST00000444867 TMEM62Q0P6H9 643 aa20.04■□□□□ 0.8
SEMA3D-202ENST00000444867 ZNF394Q53GI3 561 aa20.04■□□□□ 0.8
SEMA3D-202ENST00000444867 HSP90B2PQ58FF3 399 aa20.04■□□□□ 0.8
SEMA3D-202ENST00000444867 SLC13A5Q86YT5 568 aaPredicted RBP20.04■□□□□ 0.8
SEMA3D-202ENST00000444867 MAIP1Q8WWC4 291 aa20.04■□□□□ 0.8
SEMA3D-202ENST00000444867 KIF12Q96FN5 646 aa20.04■□□□□ 0.8
SEMA3D-202ENST00000444867 TSPAN18Q96SJ8 248 aa20.04■□□□□ 0.8
SEMA3D-202ENST00000444867 OSMRQ99650 979 aa20.04■□□□□ 0.8
SEMA3D-202ENST00000444867 HINFPQ9BQA5 517 aa20.04■□□□□ 0.8
SEMA3D-202ENST00000444867 RAB17Q9H0T7 212 aa20.04■□□□□ 0.8
SEMA3D-202ENST00000444867 IP6K2Q9UHH9 426 aa20.04■□□□□ 0.8
SEMA3D-202ENST00000444867 AMACRQ9UHK6 382 aa20.04■□□□□ 0.8
SEMA3D-202ENST00000444867 ABT1Q9ULW3 272 aaKnown RBP20.04■□□□□ 0.8
SEMA3D-202ENST00000444867 AGAP1Q9UPQ3 857 aa20.04■□□□□ 0.8
SEMA3D-202ENST00000444867 PSTPIP1O43586 416 aa20.03■□□□□ 0.8
SEMA3D-202ENST00000444867 CILPO75339 1184 aa20.03■□□□□ 0.8
SEMA3D-202ENST00000444867 FCGRTP55899 365 aa20.03■□□□□ 0.8
SEMA3D-202ENST00000444867 C1orf131Q8NDD1 294 aaKnown RBP20.03■□□□□ 0.8
SEMA3D-202ENST00000444867 DNAJB3Q8WWF6 145 aa20.03■□□□□ 0.8
SEMA3D-202ENST00000444867 IFT81Q8WYA0 676 aa20.03■□□□□ 0.8
SEMA3D-202ENST00000444867 TFAP2BQ92481 460 aa20.03■□□□□ 0.8
SEMA3D-202ENST00000444867 SEC14L1Q92503 715 aa20.03■□□□□ 0.8
SEMA3D-202ENST00000444867 SNX27Q96L92 541 aa20.03■□□□□ 0.8
SEMA3D-202ENST00000444867 SDCBP2Q9H190 292 aa20.03■□□□□ 0.8
SEMA3D-202ENST00000444867 FAM114A2Q9NRY5 505 aa20.03■□□□□ 0.8
SEMA3D-202ENST00000444867 STRIP2Q9ULQ0 834 aa20.03■□□□□ 0.8
SEMA3D-202ENST00000444867 NFU1Q9UMS0 254 aa20.03■□□□□ 0.8
SEMA3D-202ENST00000444867 ZSCAN5CA6NGD5 496 aaPredicted RBP20.02■□□□□ 0.8
SEMA3D-202ENST00000444867 SSTR3P32745 418 aaPredicted RBP20.02■□□□□ 0.8
SEMA3D-202ENST00000444867 RAP1GAPP47736 663 aa20.02■□□□□ 0.8
SEMA3D-202ENST00000444867 CRYBB1P53674 252 aaPredicted RBP20.02■□□□□ 0.8
SEMA3D-202ENST00000444867 HTRA3P83110 453 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms