RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 PTGESO14684 152 aa23.56■■□□□ 1.36
VSX1-205ENST00000429762 AFF1P51825 1210 aaKnown RBP23.56■■□□□ 1.36
VSX1-205ENST00000429762 GPC5P78333 572 aa23.56■■□□□ 1.36
VSX1-205ENST00000429762 XKR4Q5GH76 650 aa23.56■■□□□ 1.36
VSX1-205ENST00000429762 C9orf57Q5W0N0 161 aa23.56■■□□□ 1.36
VSX1-205ENST00000429762 LRRC57Q8N9N7 239 aa23.56■■□□□ 1.36
VSX1-205ENST00000429762 SLC43A3Q8NBI5 491 aa23.56■■□□□ 1.36
VSX1-205ENST00000429762 RNF169Q8NCN4 708 aa23.56■■□□□ 1.36
VSX1-205ENST00000429762 WHAMMQ8TF30 809 aa23.56■■□□□ 1.36
VSX1-205ENST00000429762 ELOVL4Q9GZR5 314 aa23.56■■□□□ 1.36
VSX1-205ENST00000429762 CTTNBP2NLQ9P2B4 639 aa23.56■■□□□ 1.36
VSX1-205ENST00000429762 SNX12Q9UMY4 172 aa23.56■■□□□ 1.36
VSX1-205ENST00000429762 TLR3O15455 904 aaKnown RBP23.56■■□□□ 1.36
VSX1-205ENST00000429762 CYP1A1P04798 512 aaPredicted RBP23.56■■□□□ 1.36
VSX1-205ENST00000429762 ITGA4P13612 1032 aa23.56■■□□□ 1.36
VSX1-205ENST00000429762 KCNE1P15382 129 aa23.56■■□□□ 1.36
VSX1-205ENST00000429762 CD19P15391 556 aa23.56■■□□□ 1.36
VSX1-205ENST00000429762 MLH1P40692 756 aa23.56■■□□□ 1.36
VSX1-205ENST00000429762 RAD23BP54727 409 aa23.56■■□□□ 1.36
VSX1-205ENST00000429762 COG1Q8WTW3 980 aa23.56■■□□□ 1.36
VSX1-205ENST00000429762 ARVCFO00192 962 aa23.55■■□□□ 1.36
VSX1-205ENST00000429762 BUB1BO60566 1050 aaPredicted RBP23.55■■□□□ 1.36
VSX1-205ENST00000429762 RPLP2P05387 115 aaKnown RBP23.55■■□□□ 1.36
VSX1-205ENST00000429762 ZSCAN20P17040 1043 aaPredicted RBP23.55■■□□□ 1.36
VSX1-205ENST00000429762 YWHAEP62258 255 aaKnown RBP23.55■■□□□ 1.36
VSX1-205ENST00000429762 FAM26DQ5JW98 314 aa23.55■■□□□ 1.36
VSX1-205ENST00000429762 CHST12Q9NRB3 414 aa23.55■■□□□ 1.36
VSX1-205ENST00000429762 SNX9Q9Y5X1 595 aa23.55■■□□□ 1.36
VSX1-205ENST00000429762 TMEM110-MUSTN1A8MSY1 372 aa23.54■■□□□ 1.36
VSX1-205ENST00000429762 CCL5P13501 91 aa23.54■■□□□ 1.36
VSX1-205ENST00000429762 NOMO3P69849 1222 aa23.54■■□□□ 1.36
VSX1-205ENST00000429762 MYO1EQ12965 1108 aa23.54■■□□□ 1.36
VSX1-205ENST00000429762 MBTPS1Q14703 1052 aa23.54■■□□□ 1.36
VSX1-205ENST00000429762 IFI16Q16666 785 aaKnown RBP23.54■■□□□ 1.36
VSX1-205ENST00000429762 MEI1Q5TIA1 1274 aa23.54■■□□□ 1.36
VSX1-205ENST00000429762 TRAF7Q6Q0C0 670 aa23.54■■□□□ 1.36
VSX1-205ENST00000429762 DAAM2Q86T65 1068 aa23.54■■□□□ 1.36
VSX1-205ENST00000429762 GAD1Q99259 594 aa23.54■■□□□ 1.36
VSX1-205ENST00000429762 RNF208Q9H0X6 261 aa23.54■■□□□ 1.36
VSX1-205ENST00000429762 WBP1LQ9NX94 342 aa23.54■■□□□ 1.36
VSX1-205ENST00000429762 SMARCAL1Q9NZC9 954 aa23.54■■□□□ 1.36
VSX1-205ENST00000429762 CILPO75339 1184 aa23.54■■□□□ 1.36
VSX1-205ENST00000429762 P4HA1P13674 534 aa23.54■■□□□ 1.36
VSX1-205ENST00000429762 SLC4A11Q8NBS3 891 aa23.54■■□□□ 1.36
VSX1-205ENST00000429762 BTBD6Q96KE9 485 aa23.54■■□□□ 1.36
VSX1-205ENST00000429762 OSBPL9Q96SU4 736 aa23.54■■□□□ 1.36
VSX1-205ENST00000429762 MRPL45Q9BRJ2 306 aaKnown RBP23.54■■□□□ 1.36
VSX1-205ENST00000429762 C11orf70Q9BRQ4 267 aa23.54■■□□□ 1.36
VSX1-205ENST00000429762 PAK6Q9NQU5 681 aaPredicted RBP23.54■■□□□ 1.36
VSX1-205ENST00000429762 EHD2Q9NZN4 543 aa23.54■■□□□ 1.36
VSX1-205ENST00000429762 SPTLC1O15269 473 aa23.53■■□□□ 1.36
VSX1-205ENST00000429762 TADA3O75528 432 aa23.53■■□□□ 1.36
VSX1-205ENST00000429762 STAU1O95793 577 aaKnown RBP23.53■■□□□ 1.36
VSX1-205ENST00000429762 IGFBP6P24592 240 aaPredicted RBP23.53■■□□□ 1.36
VSX1-205ENST00000429762 NSFP46459 744 aaKnown RBP23.53■■□□□ 1.36
VSX1-205ENST00000429762 WHAMMP3Q1A5X7 153 aa23.53■■□□□ 1.36
VSX1-205ENST00000429762 MCOLN2Q8IZK6 566 aa23.53■■□□□ 1.36
VSX1-205ENST00000429762 ADAM2Q99965 735 aa23.53■■□□□ 1.36
VSX1-205ENST00000429762 NUP85Q9BW27 656 aa23.53■■□□□ 1.36
VSX1-205ENST00000429762 MIOSQ9NXC5 875 aa23.53■■□□□ 1.36
VSX1-205ENST00000429762 CNOT8Q9UFF9 292 aaKnown RBP23.53■■□□□ 1.36
VSX1-205ENST00000429762 NDST1P52848 882 aa23.52■■□□□ 1.36
VSX1-205ENST00000429762 CENPCQ03188 943 aa23.52■■□□□ 1.36
VSX1-205ENST00000429762 DSC3Q14574 896 aa23.52■■□□□ 1.36
VSX1-205ENST00000429762 DENND1BQ6P3S1 775 aa23.52■■□□□ 1.36
VSX1-205ENST00000429762 AGMOQ6ZNB7 445 aa23.52■■□□□ 1.36
VSX1-205ENST00000429762 DPH6Q7L8W6 267 aa23.52■■□□□ 1.36
VSX1-205ENST00000429762 C1orf131Q8NDD1 294 aaKnown RBP23.52■■□□□ 1.36
VSX1-205ENST00000429762 CYP3A43Q9HB55 503 aa23.52■■□□□ 1.36
VSX1-205ENST00000429762 DNM1LO00429 736 aa23.52■■□□□ 1.36
VSX1-205ENST00000429762 PIRO00625 290 aa23.52■■□□□ 1.36
VSX1-205ENST00000429762 CYP1A2P05177 515 aa23.52■■□□□ 1.36
VSX1-205ENST00000429762 HSPA6P17066 643 aa23.52■■□□□ 1.36
VSX1-205ENST00000429762 ELF2Q15723 593 aa23.52■■□□□ 1.36
VSX1-205ENST00000429762 ERCC6LQ2NKX8 1250 aa23.52■■□□□ 1.36
VSX1-205ENST00000429762 MMS22LQ6ZRQ5 1243 aa23.52■■□□□ 1.36
VSX1-205ENST00000429762 CPNE8Q86YQ8 564 aa23.52■■□□□ 1.36
VSX1-205ENST00000429762 GSTCDQ8NEC7 633 aa23.52■■□□□ 1.36
VSX1-205ENST00000429762 RABGGTAQ92696 567 aa23.52■■□□□ 1.36
VSX1-205ENST00000429762 GTF3C4Q9UKN8 822 aa23.52■■□□□ 1.36
VSX1-205ENST00000429762 PDE2AO00408 941 aaPredicted RBP23.51■■□□□ 1.35
VSX1-205ENST00000429762 HCRTO43612 131 aa23.51■■□□□ 1.35
VSX1-205ENST00000429762 RRM1P23921 792 aa23.51■■□□□ 1.35
VSX1-205ENST00000429762 TRIM72Q6ZMU5 477 aa23.51■■□□□ 1.35
VSX1-205ENST00000429762 MON1BQ7L1V2 547 aa23.51■■□□□ 1.35
VSX1-205ENST00000429762 RHOT2Q8IXI1 618 aa23.51■■□□□ 1.35
VSX1-205ENST00000429762 LRRC52Q8N7C0 313 aa23.51■■□□□ 1.35
VSX1-205ENST00000429762 PPP1R10Q96QC0 940 aaKnown RBP23.51■■□□□ 1.35
VSX1-205ENST00000429762 NME7Q9Y5B8 376 aa23.51■■□□□ 1.35
VSX1-205ENST00000429762 CD4P01730 458 aa23.51■■□□□ 1.35
VSX1-205ENST00000429762 ATF7P17544 494 aaPredicted RBP23.51■■□□□ 1.35
VSX1-205ENST00000429762 SCNN1GP51170 649 aa23.51■■□□□ 1.35
VSX1-205ENST00000429762 TUBB2AQ13885 445 aa23.51■■□□□ 1.35
VSX1-205ENST00000429762 TEX35Q5T0J7 233 aa23.51■■□□□ 1.35
VSX1-205ENST00000429762 PEX26Q7Z412 305 aa23.51■■□□□ 1.35
VSX1-205ENST00000429762 SLFN11Q7Z7L1 901 aa23.51■■□□□ 1.35
VSX1-205ENST00000429762 ZNF564Q8TBZ8 553 aaPredicted RBP23.51■■□□□ 1.35
VSX1-205ENST00000429762 CAGE1Q8TC20 777 aa23.51■■□□□ 1.35
VSX1-205ENST00000429762 TMEM176AQ96HP8 235 aa23.51■■□□□ 1.35
VSX1-205ENST00000429762 TUBB2BQ9BVA1 445 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms