RNA–Protein interactions for RNA: ENST00000428693.1

TTC3-208, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-208ENST00000428693 FOXD4L4Q8WXT5 416 aaPredicted RBP13.02□□□□□ -0.33
TTC3-208ENST00000428693 ELSPBP1Q96BH3 223 aa13.02□□□□□ -0.33
TTC3-208ENST00000428693 ZSWIM3Q96MP5 696 aa13.02□□□□□ -0.33
TTC3-208ENST00000428693 TMEM209Q96SK2 561 aa13.02□□□□□ -0.33
TTC3-208ENST00000428693 SEPT5Q99719 369 aaPredicted RBP13.02□□□□□ -0.33
TTC3-208ENST00000428693 PYM1Q9BRP8 204 aaKnown RBP13.02□□□□□ -0.33
TTC3-208ENST00000428693 FAM213AQ9BRX8 229 aa13.02□□□□□ -0.33
TTC3-208ENST00000428693 TRMT61BQ9BVS5 477 aaKnown RBP13.02□□□□□ -0.33
TTC3-208ENST00000428693 OXCT2Q9BYC2 517 aaPredicted RBP13.02□□□□□ -0.33
TTC3-208ENST00000428693 AVENQ9NQS1 362 aaPredicted RBP13.02□□□□□ -0.33
TTC3-208ENST00000428693 DPP3Q9NY33 737 aa13.02□□□□□ -0.33
TTC3-208ENST00000428693 STK17AQ9UEE5 414 aa13.02□□□□□ -0.33
TTC3-208ENST00000428693 NDRG2Q9UN36 371 aaKnown RBP13.02□□□□□ -0.33
TTC3-208ENST00000428693 EXOC7Q9UPT5 735 aa13.02□□□□□ -0.33
TTC3-208ENST00000428693 COL4A3Q01955 1670 aa13.02□□□□□ -0.33
TTC3-208ENST00000428693 WDR87Q6ZQQ6 2873 aa13.02□□□□□ -0.33
TTC3-208ENST00000428693 MIA3Q5JRA6 1907 aa13.01□□□□□ -0.33
TTC3-208ENST00000428693 A0A1W2PRU2 124 aa13.01□□□□□ -0.33
TTC3-208ENST00000428693 MYMKA6NI61 221 aa13.01□□□□□ -0.33
TTC3-208ENST00000428693 CYB561D2O14569 222 aa13.01□□□□□ -0.33
TTC3-208ENST00000428693 SPTLC1O15269 473 aa13.01□□□□□ -0.33
TTC3-208ENST00000428693 GLULP15104 373 aa13.01□□□□□ -0.33
TTC3-208ENST00000428693 TYMPP19971 482 aa13.01□□□□□ -0.33
TTC3-208ENST00000428693 GDI1P31150 447 aa13.01□□□□□ -0.33
TTC3-208ENST00000428693 TFAMQ00059 246 aaKnown RBP13.01□□□□□ -0.33
TTC3-208ENST00000428693 CSTF1Q05048 431 aaKnown RBP13.01□□□□□ -0.33
TTC3-208ENST00000428693 GPR17Q13304 367 aa13.01□□□□□ -0.33
TTC3-208ENST00000428693 POSTNQ15063 836 aa13.01□□□□□ -0.33
TTC3-208ENST00000428693 STK38Q15208 465 aa13.01□□□□□ -0.33
TTC3-208ENST00000428693 MGAT5BQ3V5L5 792 aa13.01□□□□□ -0.33
TTC3-208ENST00000428693 ZC3H14Q6PJT7 736 aaKnown RBP13.01□□□□□ -0.33
TTC3-208ENST00000428693 POTEHQ6S545 545 aa13.01□□□□□ -0.33
TTC3-208ENST00000428693 ZNF720Q7Z2F6 126 aa13.01□□□□□ -0.33
TTC3-208ENST00000428693 THEM5Q8N1Q8 247 aa13.01□□□□□ -0.33
TTC3-208ENST00000428693 LEMD2Q8NC56 503 aa13.01□□□□□ -0.33
TTC3-208ENST00000428693 SMARCD2Q92925 531 aa13.01□□□□□ -0.33
TTC3-208ENST00000428693 SAAL1Q96ER3 474 aa13.01□□□□□ -0.33
TTC3-208ENST00000428693 ACCSQ96QU6 501 aa13.01□□□□□ -0.33
TTC3-208ENST00000428693 TSPAN18Q96SJ8 248 aa13.01□□□□□ -0.33
TTC3-208ENST00000428693 FIZ1Q96SL8 496 aa13.01□□□□□ -0.33
TTC3-208ENST00000428693 LTB4R2Q9NPC1 389 aa13.01□□□□□ -0.33
TTC3-208ENST00000428693 MAFFQ9ULX9 164 aa13.01□□□□□ -0.33
TTC3-208ENST00000428693 MRPS17Q9Y2R5 130 aaKnown RBP13.01□□□□□ -0.33
TTC3-208ENST00000428693 CACNA1IQ9P0X4 2223 aa13.01□□□□□ -0.33
TTC3-208ENST00000428693 MTMR11A4FU01 709 aa13□□□□□ -0.33
TTC3-208ENST00000428693 GOLGA8IPA6NC78 632 aa13□□□□□ -0.33
TTC3-208ENST00000428693 GOLGA8JA6NMD2 632 aa13□□□□□ -0.33
TTC3-208ENST00000428693 NRG2O14511 850 aaPredicted RBP13□□□□□ -0.33
TTC3-208ENST00000428693 DPYSL4O14531 572 aa13□□□□□ -0.33
TTC3-208ENST00000428693 ZNF263O14978 683 aa13□□□□□ -0.33
TTC3-208ENST00000428693 NCAM2O15394 837 aa13□□□□□ -0.33
TTC3-208ENST00000428693 SP9P0CG40 484 aa13□□□□□ -0.33
TTC3-208ENST00000428693 GAP43P17677 238 aa13□□□□□ -0.33
TTC3-208ENST00000428693 TAF6P49848 677 aa13□□□□□ -0.33
TTC3-208ENST00000428693 KCNA1Q09470 495 aa13□□□□□ -0.33
TTC3-208ENST00000428693 MYBPC2Q14324 1141 aa13□□□□□ -0.33
TTC3-208ENST00000428693 FOXD4L6Q3SYB3 417 aaPredicted RBP13□□□□□ -0.33
TTC3-208ENST00000428693 FOXD4L3Q6VB84 417 aaPredicted RBP13□□□□□ -0.33
TTC3-208ENST00000428693 TTC9BQ8N6N2 239 aa13□□□□□ -0.33
TTC3-208ENST00000428693 SHKBP1Q8TBC3 707 aa13□□□□□ -0.33
TTC3-208ENST00000428693 IRF7Q92985 503 aa13□□□□□ -0.33
TTC3-208ENST00000428693 ASB16Q96NS5 453 aa13□□□□□ -0.33
TTC3-208ENST00000428693 USP28Q96RU2 1077 aa13□□□□□ -0.33
TTC3-208ENST00000428693 CRISPLD1Q9H336 500 aa13□□□□□ -0.33
TTC3-208ENST00000428693 ATXN3LQ9H3M9 355 aa13□□□□□ -0.33
TTC3-208ENST00000428693 PCIF1Q9H4Z3 704 aa13□□□□□ -0.33
TTC3-208ENST00000428693 ASB7Q9H672 318 aa13□□□□□ -0.33
TTC3-208ENST00000428693 PANK4Q9NVE7 773 aa13□□□□□ -0.33
TTC3-208ENST00000428693 DLGAP2Q9P1A6 1054 aa13□□□□□ -0.33
TTC3-208ENST00000428693 SEL1LQ9UBV2 794 aa13□□□□□ -0.33
TTC3-208ENST00000428693 DERAQ9Y315 318 aa13□□□□□ -0.33
TTC3-208ENST00000428693 R3HCC1Q9Y3T6 440 aaKnown RBP13□□□□□ -0.33
TTC3-208ENST00000428693 ANK1P16157 1881 aa12.99□□□□□ -0.33
TTC3-208ENST00000428693 HEPACAM2A8MVW5 462 aa12.99□□□□□ -0.33
TTC3-208ENST00000428693 K7ELQ4 463 aaPredicted RBP12.99□□□□□ -0.33
TTC3-208ENST00000428693 PIRO00625 290 aa12.99□□□□□ -0.33
TTC3-208ENST00000428693 STX6O43752 255 aa12.99□□□□□ -0.33
TTC3-208ENST00000428693 MICAL2O94851 1124 aa12.99□□□□□ -0.33
TTC3-208ENST00000428693 LMNAP02545 664 aaKnown RBP12.99□□□□□ -0.33
TTC3-208ENST00000428693 HSP90AA1P07900 732 aaKnown RBP12.99□□□□□ -0.33
TTC3-208ENST00000428693 KRT19P08727 400 aa12.99□□□□□ -0.33
TTC3-208ENST00000428693 PSMC3P17980 439 aa12.99□□□□□ -0.33
TTC3-208ENST00000428693 FCARP24071 287 aa12.99□□□□□ -0.33
TTC3-208ENST00000428693 AARSP49588 968 aaKnown RBP eCLIP12.99□□□□□ -0.33
TTC3-208ENST00000428693 VEPH1Q14D04 833 aa12.99□□□□□ -0.33
TTC3-208ENST00000428693 L1TD1Q5T7N2 865 aaKnown RBP12.99□□□□□ -0.33
TTC3-208ENST00000428693 CENPPQ6IPU0 288 aa12.99□□□□□ -0.33
TTC3-208ENST00000428693 VITQ6UXI7 678 aa12.99□□□□□ -0.33
TTC3-208ENST00000428693 ITIH5Q86UX2 942 aa12.99□□□□□ -0.33
TTC3-208ENST00000428693 TTC8Q8TAM2 541 aa12.99□□□□□ -0.33
TTC3-208ENST00000428693 CSGALNACT1Q8TDX6 532 aa12.99□□□□□ -0.33
TTC3-208ENST00000428693 GIPC2Q8TF65 315 aa12.99□□□□□ -0.33
TTC3-208ENST00000428693 HVCN1Q96D96 273 aa12.99□□□□□ -0.33
TTC3-208ENST00000428693 GCNAQ96QF7 691 aa12.99□□□□□ -0.33
TTC3-208ENST00000428693 LPIN3Q9BQK8 851 aa12.99□□□□□ -0.33
TTC3-208ENST00000428693 ST6GALNAC4Q9H4F1 302 aa12.99□□□□□ -0.33
TTC3-208ENST00000428693 ZSCAN16Q9H4T2 348 aaPredicted RBP12.99□□□□□ -0.33
TTC3-208ENST00000428693 ABI2Q9NYB9 513 aaPredicted RBP12.99□□□□□ -0.33
TTC3-208ENST00000428693 TFIP11Q9UBB9 837 aaKnown RBP12.99□□□□□ -0.33
TTC3-208ENST00000428693 DSEQ9UL01 958 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms