RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 HDGFL2Q7Z4V5 671 aaPredicted RBP6.18□□□□□ -1.42
LINC00458-202ENST00000427299 TRMT2AQ8IZ69 625 aaKnown RBP6.18□□□□□ -1.42
LINC00458-202ENST00000427299 REPS2Q8NFH8 660 aa6.18□□□□□ -1.42
LINC00458-202ENST00000427299 EXOC6Q8TAG9 804 aa6.18□□□□□ -1.42
LINC00458-202ENST00000427299 SLC5A5Q92911 643 aa6.18□□□□□ -1.42
LINC00458-202ENST00000427299 PHACTR3Q96KR7 559 aa6.18□□□□□ -1.42
LINC00458-202ENST00000427299 ALOXE3Q9BYJ1 711 aa6.18□□□□□ -1.42
LINC00458-202ENST00000427299 PANK3Q9H999 370 aa6.18□□□□□ -1.42
LINC00458-202ENST00000427299 SEMA4GQ9NTN9 838 aa6.18□□□□□ -1.42
LINC00458-202ENST00000427299 ABCC3O15438 1527 aa6.18□□□□□ -1.42
LINC00458-202ENST00000427299 CGNL1Q0VF96 1302 aa6.18□□□□□ -1.42
LINC00458-202ENST00000427299 MAPK8IP3Q9UPT6 1336 aa6.18□□□□□ -1.42
LINC00458-202ENST00000427299 ADGRB1O14514 1584 aa6.18□□□□□ -1.42
LINC00458-202ENST00000427299 POGZQ7Z3K3 1410 aa6.17□□□□□ -1.42
LINC00458-202ENST00000427299 CFAP65Q6ZU64 1925 aaKnown RBP6.17□□□□□ -1.42
LINC00458-202ENST00000427299 SIGLEC1Q9BZZ2 1709 aa6.17□□□□□ -1.42
LINC00458-202ENST00000427299 EIF5BO60841 1220 aaKnown RBP6.17□□□□□ -1.42
LINC00458-202ENST00000427299 KATNA1O75449 491 aa6.17□□□□□ -1.42
LINC00458-202ENST00000427299 RBMXL2O75526 392 aaKnown RBP6.17□□□□□ -1.42
LINC00458-202ENST00000427299 PRKD3O94806 890 aa6.17□□□□□ -1.42
LINC00458-202ENST00000427299 SNRPA1P09661 255 aaKnown RBP6.17□□□□□ -1.42
LINC00458-202ENST00000427299 RARRES1P49788 294 aa6.17□□□□□ -1.42
LINC00458-202ENST00000427299 ERVK-21P61565 698 aa6.17□□□□□ -1.42
LINC00458-202ENST00000427299 TMPRSS15P98073 1019 aa6.17□□□□□ -1.42
LINC00458-202ENST00000427299 INAVAQ3KP66 663 aa6.17□□□□□ -1.42
LINC00458-202ENST00000427299 RASSF3Q86WH2 238 aa6.17□□□□□ -1.42
LINC00458-202ENST00000427299 COG1Q8WTW3 980 aa6.17□□□□□ -1.42
LINC00458-202ENST00000427299 VTA1Q9NP79 307 aa6.17□□□□□ -1.42
LINC00458-202ENST00000427299 THRAP3Q9Y2W1 955 aaKnown RBP6.17□□□□□ -1.42
LINC00458-202ENST00000427299 ZNF521Q96K83 1311 aa6.17□□□□□ -1.42
LINC00458-202ENST00000427299 PLEKHH1Q9ULM0 1364 aa6.17□□□□□ -1.42
LINC00458-202ENST00000427299 MLH3Q9UHC1 1453 aa6.16□□□□□ -1.42
LINC00458-202ENST00000427299 NEXMIFQ5QGS0 1516 aa6.16□□□□□ -1.42
LINC00458-202ENST00000427299 CDC42BPGQ6DT37 1551 aa6.16□□□□□ -1.42
LINC00458-202ENST00000427299 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.16□□□□□ -1.42
LINC00458-202ENST00000427299 KRTAP29-1A8MX34 341 aaPredicted RBP6.16□□□□□ -1.42
LINC00458-202ENST00000427299 PHF2O75151 1096 aa6.16□□□□□ -1.42
LINC00458-202ENST00000427299 ULK1O75385 1050 aa6.16□□□□□ -1.42
LINC00458-202ENST00000427299 ALOX15P16050 662 aaPredicted RBP6.16□□□□□ -1.42
LINC00458-202ENST00000427299 PPP2R1AP30153 589 aa6.16□□□□□ -1.42
LINC00458-202ENST00000427299 PTPN7P35236 360 aa6.16□□□□□ -1.42
LINC00458-202ENST00000427299 PDCD1Q15116 288 aa6.16□□□□□ -1.42
LINC00458-202ENST00000427299 SPDYE7PQ495Y7 208 aa6.16□□□□□ -1.42
LINC00458-202ENST00000427299 CT83Q5H943 113 aa6.16□□□□□ -1.42
LINC00458-202ENST00000427299 CCDC181Q5TID7 509 aa6.16□□□□□ -1.42
LINC00458-202ENST00000427299 TSHZ3Q63HK5 1081 aa6.16□□□□□ -1.42
LINC00458-202ENST00000427299 SP5Q6BEB4 398 aaPredicted RBP6.16□□□□□ -1.42
LINC00458-202ENST00000427299 MED25Q71SY5 747 aa6.16□□□□□ -1.42
LINC00458-202ENST00000427299 SRRM1Q8IYB3 904 aaKnown RBP6.16□□□□□ -1.42
LINC00458-202ENST00000427299 CNTD1Q8N815 330 aa6.16□□□□□ -1.42
LINC00458-202ENST00000427299 CLRN3Q8NCR9 226 aa6.16□□□□□ -1.42
LINC00458-202ENST00000427299 ANKS1AQ92625 1134 aa6.16□□□□□ -1.42
LINC00458-202ENST00000427299 FUBP3Q96I24 572 aaKnown RBP eCLIP6.16□□□□□ -1.42
LINC00458-202ENST00000427299 ZSWIM1Q9BR11 485 aa6.16□□□□□ -1.42
LINC00458-202ENST00000427299 TMEM74BQ9NUR3 256 aa6.16□□□□□ -1.42
LINC00458-202ENST00000427299 FOXJ2Q9P0K8 574 aa6.16□□□□□ -1.42
LINC00458-202ENST00000427299 NOC2LQ9Y3T9 749 aaKnown RBP6.16□□□□□ -1.42
LINC00458-202ENST00000427299 ITSN1Q15811 1721 aa6.16□□□□□ -1.42
LINC00458-202ENST00000427299 KNDC1Q76NI1 1749 aa6.16□□□□□ -1.42
LINC00458-202ENST00000427299 NEO1Q92859 1461 aa6.15□□□□□ -1.42
LINC00458-202ENST00000427299 DIP2CQ9Y2E4 1556 aa6.15□□□□□ -1.42
LINC00458-202ENST00000427299 A0A1B0GTW7 788 aa6.15□□□□□ -1.42
LINC00458-202ENST00000427299 ERBB2P04626 1255 aa6.15□□□□□ -1.42
LINC00458-202ENST00000427299 SESN3P58005 492 aa6.15□□□□□ -1.42
LINC00458-202ENST00000427299 FAPQ12884 760 aa6.15□□□□□ -1.42
LINC00458-202ENST00000427299 Q6ZVL8 140 aa6.15□□□□□ -1.42
LINC00458-202ENST00000427299 CBARPQ8N350 705 aaPredicted RBP6.15□□□□□ -1.42
LINC00458-202ENST00000427299 EAF2Q96CJ1 260 aaPredicted RBP6.15□□□□□ -1.42
LINC00458-202ENST00000427299 BOD1Q96IK1 185 aa6.15□□□□□ -1.42
LINC00458-202ENST00000427299 PDLIM2Q96JY6 352 aa6.15□□□□□ -1.42
LINC00458-202ENST00000427299 KIAA1586Q9HCI6 787 aa6.15□□□□□ -1.42
LINC00458-202ENST00000427299 NOX1Q9Y5S8 564 aa6.15□□□□□ -1.42
LINC00458-202ENST00000427299 NSD3Q9BZ95 1437 aa6.15□□□□□ -1.43
LINC00458-202ENST00000427299 MED14O60244 1454 aa6.15□□□□□ -1.43
LINC00458-202ENST00000427299 MYADML2A6NDP7 307 aa6.14□□□□□ -1.43
LINC00458-202ENST00000427299 GABRDO14764 452 aa6.14□□□□□ -1.43
LINC00458-202ENST00000427299 CACNA2D1P54289 1103 aa6.14□□□□□ -1.43
LINC00458-202ENST00000427299 KRTAP10-9P60411 292 aa6.14□□□□□ -1.43
LINC00458-202ENST00000427299 CXADRP78310 365 aa6.14□□□□□ -1.43
LINC00458-202ENST00000427299 SP140Q13342 867 aa6.14□□□□□ -1.43
LINC00458-202ENST00000427299 FSCN1Q16658 493 aaKnown RBP6.14□□□□□ -1.43
LINC00458-202ENST00000427299 RRP12Q5JTH9 1297 aaKnown RBP6.14□□□□□ -1.43
LINC00458-202ENST00000427299 SYDE2Q5VT97 1194 aa6.14□□□□□ -1.43
LINC00458-202ENST00000427299 DRC7Q8IY82 874 aa6.14□□□□□ -1.43
LINC00458-202ENST00000427299 OR7D4Q8NG98 312 aa6.14□□□□□ -1.43
LINC00458-202ENST00000427299 CCDC8Q9H0W5 538 aaPredicted RBP6.14□□□□□ -1.43
LINC00458-202ENST00000427299 RNPEPQ9H4A4 650 aa6.14□□□□□ -1.43
LINC00458-202ENST00000427299 BCO1Q9HAY6 547 aa6.14□□□□□ -1.43
LINC00458-202ENST00000427299 TBCCD1Q9NVR7 557 aa6.14□□□□□ -1.43
LINC00458-202ENST00000427299 ANKRD36BQ8N2N9 1353 aa6.14□□□□□ -1.43
LINC00458-202ENST00000427299 NOS1P29475 1434 aa6.14□□□□□ -1.43
LINC00458-202ENST00000427299 TULP4Q9NRJ4 1543 aa6.14□□□□□ -1.43
LINC00458-202ENST00000427299 CCDC78A2IDD5 438 aa6.13□□□□□ -1.43
LINC00458-202ENST00000427299 LRRC3CA6NJW4 275 aa6.13□□□□□ -1.43
LINC00458-202ENST00000427299 ALDH1L1O75891 902 aa6.13□□□□□ -1.43
LINC00458-202ENST00000427299 S100BP04271 92 aaPredicted RBP6.13□□□□□ -1.43
LINC00458-202ENST00000427299 RAP2BP61225 183 aa6.13□□□□□ -1.43
LINC00458-202ENST00000427299 UGT8Q16880 541 aa6.13□□□□□ -1.43
LINC00458-202ENST00000427299 FAM43AQ8N2R8 423 aa6.13□□□□□ -1.43
LINC00458-202ENST00000427299 NACC2Q96BF6 587 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms