RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 SIT1Q9Y3P8 196 aa10.05□□□□□ -0.8
NUP50-206ENST00000422489 GTF3C3Q9Y5Q9 886 aa10.05□□□□□ -0.8
NUP50-206ENST00000422489 TECTAO75443 2155 aa10.05□□□□□ -0.8
NUP50-206ENST00000422489 PPP1R37O75864 691 aa10.04□□□□□ -0.8
NUP50-206ENST00000422489 YEATS4O95619 227 aa10.04□□□□□ -0.8
NUP50-206ENST00000422489 F13A1P00488 732 aa10.04□□□□□ -0.8
NUP50-206ENST00000422489 DCNP07585 359 aaKnown RBP10.04□□□□□ -0.8
NUP50-206ENST00000422489 TYMPP19971 482 aa10.04□□□□□ -0.8
NUP50-206ENST00000422489 ME1P48163 572 aa10.04□□□□□ -0.8
NUP50-206ENST00000422489 EPHB3P54753 998 aa10.04□□□□□ -0.8
NUP50-206ENST00000422489 ASIC1P78348 528 aa10.04□□□□□ -0.8
NUP50-206ENST00000422489 GPR17Q13304 367 aa10.04□□□□□ -0.8
NUP50-206ENST00000422489 ALCAMQ13740 583 aa10.04□□□□□ -0.8
NUP50-206ENST00000422489 CENPPQ6IPU0 288 aa10.04□□□□□ -0.8
NUP50-206ENST00000422489 SHC4Q6S5L8 630 aa10.04□□□□□ -0.8
NUP50-206ENST00000422489 STXBP4Q6ZWJ1 553 aa10.04□□□□□ -0.8
NUP50-206ENST00000422489 GPIHBP1Q8IV16 184 aa10.04□□□□□ -0.8
NUP50-206ENST00000422489 ATAD1Q8NBU5 361 aa10.04□□□□□ -0.8
NUP50-206ENST00000422489 ZSWIM2Q8NEG5 633 aa10.04□□□□□ -0.8
NUP50-206ENST00000422489 CACTINQ8WUQ7 758 aaKnown RBP10.04□□□□□ -0.8
NUP50-206ENST00000422489 SHDQ96IW2 340 aa10.04□□□□□ -0.8
NUP50-206ENST00000422489 CBWD1Q9BRT8 395 aa10.04□□□□□ -0.8
NUP50-206ENST00000422489 ASAH2Q9NR71 780 aa10.04□□□□□ -0.8
NUP50-206ENST00000422489 OLFML3Q9NRN5 406 aa10.04□□□□□ -0.8
NUP50-206ENST00000422489 FAM13BQ9NYF5 915 aa10.04□□□□□ -0.8
NUP50-206ENST00000422489 RBAKQ9NYW8 714 aaPredicted RBP10.04□□□□□ -0.8
NUP50-206ENST00000422489 DSEQ9UL01 958 aa10.04□□□□□ -0.8
NUP50-206ENST00000422489 R3HCC1Q9Y3T6 440 aaKnown RBP10.04□□□□□ -0.8
NUP50-206ENST00000422489 C2CD2Q9Y426 696 aa10.04□□□□□ -0.8
NUP50-206ENST00000422489 YIPF1Q9Y548 306 aa10.04□□□□□ -0.8
NUP50-206ENST00000422489 MORC2Q9Y6X9 1032 aaPredicted RBP10.04□□□□□ -0.8
NUP50-206ENST00000422489 PLXNA3P51805 1871 aa10.04□□□□□ -0.8
NUP50-206ENST00000422489 ANO9A1A5B4 782 aa10.03□□□□□ -0.8
NUP50-206ENST00000422489 KPNA7A9QM74 516 aa10.03□□□□□ -0.8
NUP50-206ENST00000422489 POLR2DO15514 142 aaKnown RBP10.03□□□□□ -0.8
NUP50-206ENST00000422489 EXTL3O43909 919 aa10.03□□□□□ -0.8
NUP50-206ENST00000422489 ECI2O75521 394 aa10.03□□□□□ -0.8
NUP50-206ENST00000422489 SOAT2O75908 522 aa10.03□□□□□ -0.8
NUP50-206ENST00000422489 VNN2O95498 520 aa10.03□□□□□ -0.8
NUP50-206ENST00000422489 KRT19P08727 400 aa10.03□□□□□ -0.8
NUP50-206ENST00000422489 PDIA4P13667 645 aaKnown RBP10.03□□□□□ -0.8
NUP50-206ENST00000422489 CD72P21854 359 aa10.03□□□□□ -0.8
NUP50-206ENST00000422489 GARTP22102 1010 aa10.03□□□□□ -0.8
NUP50-206ENST00000422489 CCR2P41597 374 aa10.03□□□□□ -0.8
NUP50-206ENST00000422489 PFKPQ01813 784 aa10.03□□□□□ -0.8
NUP50-206ENST00000422489 POU5F1Q01860 360 aaKnown RBP10.03□□□□□ -0.8
NUP50-206ENST00000422489 BFSP1Q12934 665 aa10.03□□□□□ -0.8
NUP50-206ENST00000422489 PLD1Q13393 1074 aa10.03□□□□□ -0.8
NUP50-206ENST00000422489 MYBPC2Q14324 1141 aa10.03□□□□□ -0.8
NUP50-206ENST00000422489 GRM2Q14416 872 aa10.03□□□□□ -0.8
NUP50-206ENST00000422489 UBXN2BQ14CS0 331 aa10.03□□□□□ -0.8
NUP50-206ENST00000422489 ANGPT1Q15389 498 aa10.03□□□□□ -0.8
NUP50-206ENST00000422489 TEAD2Q15562 447 aa10.03□□□□□ -0.8
NUP50-206ENST00000422489 TAF12Q16514 161 aa10.03□□□□□ -0.8
NUP50-206ENST00000422489 SV2CQ496J9 727 aa10.03□□□□□ -0.8
NUP50-206ENST00000422489 SLC39A12Q504Y0 691 aa10.03□□□□□ -0.8
NUP50-206ENST00000422489 FAM78AQ5JUQ0 283 aa10.03□□□□□ -0.8
NUP50-206ENST00000422489 PRSS36Q5K4E3 855 aa10.03□□□□□ -0.8
NUP50-206ENST00000422489 WSCD1Q658N2 575 aa10.03□□□□□ -0.8
NUP50-206ENST00000422489 PHLDB3Q6NSJ2 640 aa10.03□□□□□ -0.8
NUP50-206ENST00000422489 DNAJB7Q7Z6W7 309 aaPredicted RBP10.03□□□□□ -0.8
NUP50-206ENST00000422489 EFCAB13Q8IY85 973 aa10.03□□□□□ -0.8
NUP50-206ENST00000422489 CCDC105Q8IYK2 499 aa10.03□□□□□ -0.8
NUP50-206ENST00000422489 CSGALNACT2Q8N6G5 542 aa10.03□□□□□ -0.8
NUP50-206ENST00000422489 RDH13Q8NBN7 331 aa10.03□□□□□ -0.8
NUP50-206ENST00000422489 GLIS3Q8NEA6 775 aa10.03□□□□□ -0.8
NUP50-206ENST00000422489 GIPC2Q8TF65 315 aa10.03□□□□□ -0.8
NUP50-206ENST00000422489 ZSWIM3Q96MP5 696 aa10.03□□□□□ -0.8
NUP50-206ENST00000422489 SEPT5Q99719 369 aaPredicted RBP10.03□□□□□ -0.8
NUP50-206ENST00000422489 FOXQ1Q9C009 403 aa10.03□□□□□ -0.8
NUP50-206ENST00000422489 BLZF1Q9H2G9 400 aa10.03□□□□□ -0.8
NUP50-206ENST00000422489 TNMDQ9H2S6 317 aa10.03□□□□□ -0.8
NUP50-206ENST00000422489 CRISPLD1Q9H336 500 aa10.03□□□□□ -0.8
NUP50-206ENST00000422489 CUEDC2Q9H467 287 aa10.03□□□□□ -0.8
NUP50-206ENST00000422489 SLITRK6Q9H5Y7 841 aa10.03□□□□□ -0.8
NUP50-206ENST00000422489 ZFP14Q9HCL3 533 aa10.03□□□□□ -0.8
NUP50-206ENST00000422489 AVENQ9NQS1 362 aaPredicted RBP10.03□□□□□ -0.8
NUP50-206ENST00000422489 KBTBD4Q9NVX7 518 aa10.03□□□□□ -0.8
NUP50-206ENST00000422489 CFAP45Q9UL16 551 aa10.03□□□□□ -0.8
NUP50-206ENST00000422489 PCDHA7Q9UN72 937 aa10.03□□□□□ -0.8
NUP50-206ENST00000422489 A0A1W2PRU2 124 aa10.02□□□□□ -0.81
NUP50-206ENST00000422489 FRMD3A2A2Y4 597 aa10.02□□□□□ -0.81
NUP50-206ENST00000422489 MTMR11A4FU01 709 aa10.02□□□□□ -0.81
NUP50-206ENST00000422489 ZNF233A6NK53 670 aa10.02□□□□□ -0.81
NUP50-206ENST00000422489 FAM170BA6NMN3 283 aa10.02□□□□□ -0.81
NUP50-206ENST00000422489 GFRA3O60609 400 aa10.02□□□□□ -0.81
NUP50-206ENST00000422489 HUS1O60921 280 aa10.02□□□□□ -0.81
NUP50-206ENST00000422489 LRRN2O75325 713 aa10.02□□□□□ -0.81
NUP50-206ENST00000422489 MOSPD3O75425 235 aa10.02□□□□□ -0.81
NUP50-206ENST00000422489 MICAL2O94851 1124 aa10.02□□□□□ -0.81
NUP50-206ENST00000422489 ITGB3P05106 788 aa10.02□□□□□ -0.81
NUP50-206ENST00000422489 TMEM191BP0C7N4 346 aa10.02□□□□□ -0.81
NUP50-206ENST00000422489 POLR2BP30876 1174 aaKnown RBP10.02□□□□□ -0.81
NUP50-206ENST00000422489 PNPLA4P41247 253 aa10.02□□□□□ -0.81
NUP50-206ENST00000422489 VIPR2P41587 438 aa10.02□□□□□ -0.81
NUP50-206ENST00000422489 AFMP43652 599 aa10.02□□□□□ -0.81
NUP50-206ENST00000422489 TUFMP49411 452 aaKnown RBP10.02□□□□□ -0.81
NUP50-206ENST00000422489 WNT7BP56706 349 aa10.02□□□□□ -0.81
NUP50-206ENST00000422489 RBP5P82980 135 aa10.02□□□□□ -0.81
NUP50-206ENST00000422489 DNM1Q05193 864 aaKnown RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms