RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 AGPAT3Q9NRZ7 376 aa12.1□□□□□ -0.47
RFFL-204ENST00000414419 IGSF9Q9P2J2 1179 aa12.1□□□□□ -0.47
RFFL-204ENST00000414419 AGAP1Q9UPQ3 857 aa12.1□□□□□ -0.47
RFFL-204ENST00000414419 ZFP37Q9Y6Q3 630 aaPredicted RBP12.1□□□□□ -0.47
RFFL-204ENST00000414419 KPNA7A9QM74 516 aa12.09□□□□□ -0.47
RFFL-204ENST00000414419 SPTLC1O15269 473 aa12.09□□□□□ -0.47
RFFL-204ENST00000414419 TNNC2P02585 160 aa12.09□□□□□ -0.47
RFFL-204ENST00000414419 ITGB3P05106 788 aa12.09□□□□□ -0.47
RFFL-204ENST00000414419 PTPN2P17706 415 aa12.09□□□□□ -0.47
RFFL-204ENST00000414419 POLR2BP30876 1174 aaKnown RBP12.09□□□□□ -0.47
RFFL-204ENST00000414419 HOXD13P35453 343 aa12.09□□□□□ -0.47
RFFL-204ENST00000414419 CYP2J2P51589 502 aa12.09□□□□□ -0.47
RFFL-204ENST00000414419 RBP5P82980 135 aa12.09□□□□□ -0.47
RFFL-204ENST00000414419 TDGQ13569 410 aa12.09□□□□□ -0.47
RFFL-204ENST00000414419 MYBPC2Q14324 1141 aa12.09□□□□□ -0.47
RFFL-204ENST00000414419 SNRNP35Q16560 246 aaKnown RBP12.09□□□□□ -0.47
RFFL-204ENST00000414419 KMT5BQ4FZB7 885 aa12.09□□□□□ -0.47
RFFL-204ENST00000414419 IQCEQ6IPM2 695 aa12.09□□□□□ -0.47
RFFL-204ENST00000414419 RNF19BQ6ZMZ0 732 aa12.09□□□□□ -0.47
RFFL-204ENST00000414419 CBWD2Q8IUF1 395 aa12.09□□□□□ -0.47
RFFL-204ENST00000414419 XXYLT1Q8NBI6 393 aa12.09□□□□□ -0.47
RFFL-204ENST00000414419 GOLGA5Q8TBA6 731 aa12.09□□□□□ -0.47
RFFL-204ENST00000414419 NXPE3Q969Y0 559 aa12.09□□□□□ -0.47
RFFL-204ENST00000414419 ZNF512Q96ME7 567 aaPredicted RBP12.09□□□□□ -0.47
RFFL-204ENST00000414419 FNBP1Q96RU3 617 aa12.09□□□□□ -0.47
RFFL-204ENST00000414419 MYADMQ96S97 322 aa12.09□□□□□ -0.47
RFFL-204ENST00000414419 KCNK12Q9HB15 430 aa12.09□□□□□ -0.47
RFFL-204ENST00000414419 ITGA11Q9UKX5 1188 aa12.09□□□□□ -0.47
RFFL-204ENST00000414419 INSL5Q9Y5Q6 135 aa12.09□□□□□ -0.47
RFFL-204ENST00000414419 NOTCH4Q99466 2003 aa12.09□□□□□ -0.47
RFFL-204ENST00000414419 FAM237AA0A1B0GTK4 181 aa12.08□□□□□ -0.48
RFFL-204ENST00000414419 TGFB1I1O43294 461 aa12.08□□□□□ -0.48
RFFL-204ENST00000414419 KLRC4O43908 158 aa12.08□□□□□ -0.48
RFFL-204ENST00000414419 EXOC3O60645 756 aa12.08□□□□□ -0.48
RFFL-204ENST00000414419 HUS1O60921 280 aa12.08□□□□□ -0.48
RFFL-204ENST00000414419 N4BP1O75113 896 aaKnown RBP12.08□□□□□ -0.48
RFFL-204ENST00000414419 ZNF202O95125 648 aa12.08□□□□□ -0.48
RFFL-204ENST00000414419 KIF20AO95235 890 aa12.08□□□□□ -0.48
RFFL-204ENST00000414419 SEC24AO95486 1093 aa12.08□□□□□ -0.48
RFFL-204ENST00000414419 RPN1P04843 607 aaKnown RBP12.08□□□□□ -0.48
RFFL-204ENST00000414419 CYP11A1P05108 521 aa12.08□□□□□ -0.48
RFFL-204ENST00000414419 OR4Q2P0C623 313 aa12.08□□□□□ -0.48
RFFL-204ENST00000414419 LAMP2P13473 410 aa12.08□□□□□ -0.48
RFFL-204ENST00000414419 TNNI1P19237 187 aa12.08□□□□□ -0.48
RFFL-204ENST00000414419 WNT7BP56706 349 aa12.08□□□□□ -0.48
RFFL-204ENST00000414419 NTHL1P78549 312 aa12.08□□□□□ -0.48
RFFL-204ENST00000414419 MYO1EQ12965 1108 aa12.08□□□□□ -0.48
RFFL-204ENST00000414419 STK4Q13043 487 aa12.08□□□□□ -0.48
RFFL-204ENST00000414419 GPR17Q13304 367 aa12.08□□□□□ -0.48
RFFL-204ENST00000414419 PLD1Q13393 1074 aa12.08□□□□□ -0.48
RFFL-204ENST00000414419 DUOXA2Q1HG44 320 aa12.08□□□□□ -0.48
RFFL-204ENST00000414419 BMT2Q1RMZ1 405 aa12.08□□□□□ -0.48
RFFL-204ENST00000414419 KRBA2Q6ZNG9 492 aa12.08□□□□□ -0.48
RFFL-204ENST00000414419 HFE2Q6ZVN8 426 aa12.08□□□□□ -0.48
RFFL-204ENST00000414419 SUGP1Q8IWZ8 645 aaKnown RBP12.08□□□□□ -0.48
RFFL-204ENST00000414419 C1orf127Q8N9H9 656 aa12.08□□□□□ -0.48
RFFL-204ENST00000414419 PGLYRP2Q96PD5 576 aa12.08□□□□□ -0.48
RFFL-204ENST00000414419 MTMR12Q9C0I1 747 aa12.08□□□□□ -0.48
RFFL-204ENST00000414419 HCFC1R1Q9NWW0 138 aa12.08□□□□□ -0.48
RFFL-204ENST00000414419 EPS15L1Q9UBC2 864 aa12.08□□□□□ -0.48
RFFL-204ENST00000414419 DNMT3BQ9UBC3 853 aaKnown RBP12.08□□□□□ -0.48
RFFL-204ENST00000414419 CDH7Q9ULB5 785 aa12.08□□□□□ -0.48
RFFL-204ENST00000414419 MRPS23Q9Y3D9 190 aaKnown RBP12.08□□□□□ -0.48
RFFL-204ENST00000414419 TSC2P49815 1807 aa12.08□□□□□ -0.48
RFFL-204ENST00000414419 ZNF197O14709 1029 aa12.07□□□□□ -0.48
RFFL-204ENST00000414419 PRPF40AO75400 957 aaKnown RBP12.07□□□□□ -0.48
RFFL-204ENST00000414419 RHOP08100 348 aa12.07□□□□□ -0.48
RFFL-204ENST00000414419 DLATP10515 647 aaKnown RBP12.07□□□□□ -0.48
RFFL-204ENST00000414419 ALDH1A3P47895 512 aa12.07□□□□□ -0.48
RFFL-204ENST00000414419 EPHB3P54753 998 aa12.07□□□□□ -0.48
RFFL-204ENST00000414419 TWF1Q12792 350 aa12.07□□□□□ -0.48
RFFL-204ENST00000414419 BFSP1Q12934 665 aa12.07□□□□□ -0.48
RFFL-204ENST00000414419 CYP4A22Q5TCH4 519 aa12.07□□□□□ -0.48
RFFL-204ENST00000414419 LMBRD2Q68DH5 695 aaPredicted RBP12.07□□□□□ -0.48
RFFL-204ENST00000414419 BMP8AQ7Z5Y6 402 aa12.07□□□□□ -0.48
RFFL-204ENST00000414419 WDR49Q8IV35 697 aa12.07□□□□□ -0.48
RFFL-204ENST00000414419 LRRC52Q8N7C0 313 aa12.07□□□□□ -0.48
RFFL-204ENST00000414419 CCDC127Q96BQ5 260 aa12.07□□□□□ -0.48
RFFL-204ENST00000414419 CORO1BQ9BR76 489 aa12.07□□□□□ -0.48
RFFL-204ENST00000414419 INTS13Q9NVM9 706 aa12.07□□□□□ -0.48
RFFL-204ENST00000414419 MYL7Q01449 175 aa12.06□□□□□ -0.48
RFFL-204ENST00000414419 TSPY1Q01534 308 aa12.06□□□□□ -0.48
RFFL-204ENST00000414419 CYP24A1Q07973 514 aa12.06□□□□□ -0.48
RFFL-204ENST00000414419 DUSP4Q13115 394 aa12.06□□□□□ -0.48
RFFL-204ENST00000414419 SLC39A12Q504Y0 691 aa12.06□□□□□ -0.48
RFFL-204ENST00000414419 WSCD1Q658N2 575 aa12.06□□□□□ -0.48
RFFL-204ENST00000414419 CENPPQ6IPU0 288 aa12.06□□□□□ -0.48
RFFL-204ENST00000414419 MTSS1LQ765P7 747 aa12.06□□□□□ -0.48
RFFL-204ENST00000414419 PDZD4Q76G19 769 aaPredicted RBP12.06□□□□□ -0.48
RFFL-204ENST00000414419 C12orf56Q8IXR9 622 aa12.06□□□□□ -0.48
RFFL-204ENST00000414419 DCP1BQ8IZD4 617 aaKnown RBP12.06□□□□□ -0.48
RFFL-204ENST00000414419 TMEM86AQ8N2M4 240 aa12.06□□□□□ -0.48
RFFL-204ENST00000414419 KIAA0895Q8NCT3 520 aa12.06□□□□□ -0.48
RFFL-204ENST00000414419 ITFG1Q8TB96 612 aa12.06□□□□□ -0.48
RFFL-204ENST00000414419 RSAD2Q8WXG1 361 aa12.06□□□□□ -0.48
RFFL-204ENST00000414419 ING5Q8WYH8 240 aa12.06□□□□□ -0.48
RFFL-204ENST00000414419 FGF13Q92913 245 aa12.06□□□□□ -0.48
RFFL-204ENST00000414419 BORCS6Q96GS4 357 aa12.06□□□□□ -0.48
RFFL-204ENST00000414419 MFSD1Q9H3U5 465 aa12.06□□□□□ -0.48
RFFL-204ENST00000414419 GOLPH3LQ9H4A5 285 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms