RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 COQ4Q9Y3A0 265 aa32.86■■■□□ 2.85
CSNK1E-206ENST00000413574 ASS1P00966 412 aaKnown RBP32.85■■■□□ 2.85
CSNK1E-206ENST00000413574 VWA3BQ502W6 1294 aa32.85■■■□□ 2.85
CSNK1E-206ENST00000413574 APOBEC3GQ9HC16 384 aaKnown RBP32.85■■■□□ 2.85
CSNK1E-206ENST00000413574 MRPL17Q9NRX2 175 aaKnown RBP32.85■■■□□ 2.85
CSNK1E-206ENST00000413574 MTCH2Q9Y6C9 303 aa32.85■■■□□ 2.85
CSNK1E-206ENST00000413574 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP32.84■■■□□ 2.85
CSNK1E-206ENST00000413574 SYN3O14994 580 aa32.84■■■□□ 2.85
CSNK1E-206ENST00000413574 STAU1O95793 577 aaKnown RBP32.84■■■□□ 2.85
CSNK1E-206ENST00000413574 ODC1P11926 461 aa32.84■■■□□ 2.85
CSNK1E-206ENST00000413574 SMC1AQ14683 1233 aaKnown RBP32.84■■■□□ 2.85
CSNK1E-206ENST00000413574 VARS2Q5ST30 1063 aaKnown RBP32.84■■■□□ 2.85
CSNK1E-206ENST00000413574 RNF214Q8ND24 703 aa32.84■■■□□ 2.85
CSNK1E-206ENST00000413574 LNX1Q8TBB1 728 aaPredicted RBP32.84■■■□□ 2.85
CSNK1E-206ENST00000413574 GAS2L1Q99501 681 aaPredicted RBP32.84■■■□□ 2.85
CSNK1E-206ENST00000413574 NDST4Q9H3R1 872 aa32.84■■■□□ 2.85
CSNK1E-206ENST00000413574 NGRNQ9NPE2 291 aaKnown RBP32.84■■■□□ 2.85
CSNK1E-206ENST00000413574 L1RE1Q9UN81 338 aa32.84■■■□□ 2.85
CSNK1E-206ENST00000413574 PES1O00541 588 aaKnown RBP32.84■■■□□ 2.85
CSNK1E-206ENST00000413574 LILRB3O75022 631 aa32.84■■■□□ 2.85
CSNK1E-206ENST00000413574 N4BP1O75113 896 aaKnown RBP32.84■■■□□ 2.85
CSNK1E-206ENST00000413574 PAX3P23760 479 aa32.84■■■□□ 2.85
CSNK1E-206ENST00000413574 WSCD1Q658N2 575 aa32.84■■■□□ 2.85
CSNK1E-206ENST00000413574 ADGRD2Q7Z7M1 963 aa32.84■■■□□ 2.85
CSNK1E-206ENST00000413574 MRPL43Q8N983 215 aaKnown RBP32.84■■■□□ 2.85
CSNK1E-206ENST00000413574 VRTNQ9H8Y1 702 aa32.84■■■□□ 2.85
CSNK1E-206ENST00000413574 LIMA1Q9UHB6 759 aaKnown RBP32.84■■■□□ 2.85
CSNK1E-206ENST00000413574 C2orf71A6NGG8 1288 aa32.83■■■□□ 2.85
CSNK1E-206ENST00000413574 RPL17P18621 184 aaKnown RBP32.83■■■□□ 2.85
CSNK1E-206ENST00000413574 SOWAHAQ2M3V2 549 aa32.83■■■□□ 2.85
CSNK1E-206ENST00000413574 ZNF667Q5HYK9 610 aa32.83■■■□□ 2.85
CSNK1E-206ENST00000413574 PDCL2Q8N4E4 241 aa32.83■■■□□ 2.85
CSNK1E-206ENST00000413574 APPL2Q8NEU8 664 aa32.83■■■□□ 2.85
CSNK1E-206ENST00000413574 MMS19Q96T76 1030 aa32.83■■■□□ 2.85
CSNK1E-206ENST00000413574 CRACR2AQ9BSW2 395 aa32.83■■■□□ 2.85
CSNK1E-206ENST00000413574 PMM2O15305 246 aa32.82■■■□□ 2.84
CSNK1E-206ENST00000413574 HUS1O60921 280 aa32.82■■■□□ 2.84
CSNK1E-206ENST00000413574 TNNC1P63316 161 aa32.82■■■□□ 2.84
CSNK1E-206ENST00000413574 NOP14P78316 857 aaKnown RBP32.82■■■□□ 2.84
CSNK1E-206ENST00000413574 SCARA5Q6ZMJ2 495 aa32.82■■■□□ 2.84
CSNK1E-206ENST00000413574 PIK3R5Q8WYR1 880 aa32.82■■■□□ 2.84
CSNK1E-206ENST00000413574 IMPG2Q9BZV3 1241 aa32.82■■■□□ 2.84
CSNK1E-206ENST00000413574 LRMPQ12912 555 aa32.81■■■□□ 2.84
CSNK1E-206ENST00000413574 PSMD5Q16401 504 aa32.81■■■□□ 2.84
CSNK1E-206ENST00000413574 APTXQ7Z2E3 356 aaKnown RBP32.81■■■□□ 2.84
CSNK1E-206ENST00000413574 GLYCTKQ8IVS8 523 aa32.81■■■□□ 2.84
CSNK1E-206ENST00000413574 LMO3Q8TAP4 145 aa32.81■■■□□ 2.84
CSNK1E-206ENST00000413574 TAF4BQ92750 862 aa32.81■■■□□ 2.84
CSNK1E-206ENST00000413574 GOLGA6L19H0YKK7 550 aa32.8■■■□□ 2.84
CSNK1E-206ENST00000413574 P4HA2O15460 535 aa32.8■■■□□ 2.84
CSNK1E-206ENST00000413574 CYP11A1P05108 521 aa32.8■■■□□ 2.84
CSNK1E-206ENST00000413574 COPB1P53618 953 aaKnown RBP32.8■■■□□ 2.84
CSNK1E-206ENST00000413574 YWHAHQ04917 246 aaPredicted RBP32.8■■■□□ 2.84
CSNK1E-206ENST00000413574 MRPL58Q14197 206 aaKnown RBP32.8■■■□□ 2.84
CSNK1E-206ENST00000413574 BMS1Q14692 1282 aaKnown RBP32.8■■■□□ 2.84
CSNK1E-206ENST00000413574 PDE12Q6L8Q7 609 aaKnown RBP32.8■■■□□ 2.84
CSNK1E-206ENST00000413574 RSPO2Q6UXX9 243 aaPredicted RBP32.8■■■□□ 2.84
CSNK1E-206ENST00000413574 RBM23Q86U06 439 aaKnown RBP32.8■■■□□ 2.84
CSNK1E-206ENST00000413574 TATDN2Q93075 761 aa32.8■■■□□ 2.84
CSNK1E-206ENST00000413574 SMYD3Q9H7B4 428 aa32.8■■■□□ 2.84
CSNK1E-206ENST00000413574 LMCD1Q9NZU5 365 aa32.8■■■□□ 2.84
CSNK1E-206ENST00000413574 IRAK3Q9Y616 596 aa32.8■■■□□ 2.84
CSNK1E-206ENST00000413574 PER2O15055 1255 aa32.8■■■□□ 2.84
CSNK1E-206ENST00000413574 CNPP09543 421 aaKnown RBP32.8■■■□□ 2.84
CSNK1E-206ENST00000413574 TYMPP19971 482 aa32.8■■■□□ 2.84
CSNK1E-206ENST00000413574 POU3F3P20264 500 aaPredicted RBP32.8■■■□□ 2.84
CSNK1E-206ENST00000413574 RAP1GAPP47736 663 aa32.8■■■□□ 2.84
CSNK1E-206ENST00000413574 OVOS1Q6IE37 1185 aa32.8■■■□□ 2.84
CSNK1E-206ENST00000413574 MICALL1Q8N3F8 863 aa32.8■■■□□ 2.84
CSNK1E-206ENST00000413574 TOP6BLQ8N6T0 577 aa32.8■■■□□ 2.84
CSNK1E-206ENST00000413574 ANKRD20A12PQ8NF67 263 aa32.8■■■□□ 2.84
CSNK1E-206ENST00000413574 ADAM12O43184 909 aa32.79■■■□□ 2.84
CSNK1E-206ENST00000413574 CDH8P55286 799 aa32.79■■■□□ 2.84
CSNK1E-206ENST00000413574 CETN1Q12798 172 aa32.79■■■□□ 2.84
CSNK1E-206ENST00000413574 ANKS3Q6ZW76 656 aa32.79■■■□□ 2.84
CSNK1E-206ENST00000413574 LIMS2Q7Z4I7 341 aa32.79■■■□□ 2.84
CSNK1E-206ENST00000413574 CCDC150Q8NCX0 1101 aa32.79■■■□□ 2.84
CSNK1E-206ENST00000413574 EHBP1Q8NDI1 1231 aa32.79■■■□□ 2.84
CSNK1E-206ENST00000413574 MRPL45Q9BRJ2 306 aaKnown RBP32.79■■■□□ 2.84
CSNK1E-206ENST00000413574 GCNT4Q9P109 453 aa32.79■■■□□ 2.84
CSNK1E-206ENST00000413574 LRRC10BA6NIK2 292 aa32.78■■■□□ 2.84
CSNK1E-206ENST00000413574 HCRTO43612 131 aa32.78■■■□□ 2.84
CSNK1E-206ENST00000413574 ASPAP45381 313 aa32.78■■■□□ 2.84
CSNK1E-206ENST00000413574 WDR44Q5JSH3 913 aa32.78■■■□□ 2.84
CSNK1E-206ENST00000413574 OSTM1Q86WC4 334 aa32.78■■■□□ 2.84
CSNK1E-206ENST00000413574 ADGRF2Q8IZF7 708 aa32.78■■■□□ 2.84
CSNK1E-206ENST00000413574 KBTBD7Q8WVZ9 684 aa32.78■■■□□ 2.84
CSNK1E-206ENST00000413574 CLSTN3Q9BQT9 956 aa32.78■■■□□ 2.84
CSNK1E-206ENST00000413574 INTS2Q9H0H0 1204 aaKnown RBP32.78■■■□□ 2.84
CSNK1E-206ENST00000413574 SDCBP2Q9H190 292 aa32.78■■■□□ 2.84
CSNK1E-206ENST00000413574 DSEQ9UL01 958 aa32.78■■■□□ 2.84
CSNK1E-206ENST00000413574 SSX2IPQ9Y2D8 614 aa32.78■■■□□ 2.84
CSNK1E-206ENST00000413574 TEX28O15482 410 aa32.77■■■□□ 2.84
CSNK1E-206ENST00000413574 OAZ2O95190 189 aa32.77■■■□□ 2.84
CSNK1E-206ENST00000413574 SLC9A1P19634 815 aa32.77■■■□□ 2.84
CSNK1E-206ENST00000413574 CTXN3Q4LDR2 81 aa32.77■■■□□ 2.84
CSNK1E-206ENST00000413574 TCEAL5Q5H9L2 206 aa32.77■■■□□ 2.84
CSNK1E-206ENST00000413574 METTL23Q86XA0 190 aa32.77■■■□□ 2.84
CSNK1E-206ENST00000413574 GAS2L3Q86XJ1 694 aa32.77■■■□□ 2.84
CSNK1E-206ENST00000413574 KLHL5Q96PQ7 755 aa32.77■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms