RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 PCDHGA5Q9Y5G8 931 aa18.22■□□□□ 0.51
CHMP3-203ENST00000409225 PHLPP2Q6ZVD8 1323 aa18.22■□□□□ 0.51
CHMP3-203ENST00000409225 GIPC1O14908 333 aa18.21■□□□□ 0.51
CHMP3-203ENST00000409225 MEFVO15553 781 aaPredicted RBP18.21■□□□□ 0.51
CHMP3-203ENST00000409225 PRAMEF12O95522 483 aa18.21■□□□□ 0.51
CHMP3-203ENST00000409225 RPA1P27694 616 aa18.21■□□□□ 0.51
CHMP3-203ENST00000409225 ALDH1A3P47895 512 aa18.21■□□□□ 0.51
CHMP3-203ENST00000409225 YWHAHQ04917 246 aaPredicted RBP18.21■□□□□ 0.51
CHMP3-203ENST00000409225 FOXC1Q12948 553 aa18.21■□□□□ 0.51
CHMP3-203ENST00000409225 DIS3L2Q8IYB7 885 aaKnown RBP18.21■□□□□ 0.51
CHMP3-203ENST00000409225 TMEM209Q96SK2 561 aa18.21■□□□□ 0.51
CHMP3-203ENST00000409225 TCHPQ9BT92 498 aa18.21■□□□□ 0.51
CHMP3-203ENST00000409225 EDEM2Q9BV94 578 aa18.21■□□□□ 0.51
CHMP3-203ENST00000409225 MRPL4Q9BYD3 311 aaKnown RBP18.21■□□□□ 0.51
CHMP3-203ENST00000409225 POLR3BQ9NW08 1133 aaPredicted RBP18.21■□□□□ 0.51
CHMP3-203ENST00000409225 TUBGCP4Q9UGJ1 667 aa18.21■□□□□ 0.51
CHMP3-203ENST00000409225 SLC27A5Q9Y2P5 690 aa18.21■□□□□ 0.51
CHMP3-203ENST00000409225 KIF26AQ9ULI4 1882 aaPredicted RBP18.2■□□□□ 0.5
CHMP3-203ENST00000409225 CCDC163A0A0D9SF12 145 aa18.2■□□□□ 0.5
CHMP3-203ENST00000409225 SOAT2O75908 522 aa18.2■□□□□ 0.5
CHMP3-203ENST00000409225 MCF2P10911 925 aa18.2■□□□□ 0.5
CHMP3-203ENST00000409225 SPINK2P20155 84 aa18.2■□□□□ 0.5
CHMP3-203ENST00000409225 PEX3P56589 373 aa18.2■□□□□ 0.5
CHMP3-203ENST00000409225 PLCB2Q00722 1185 aa18.2■□□□□ 0.5
CHMP3-203ENST00000409225 CACNB1Q02641 598 aaPredicted RBP18.2■□□□□ 0.5
CHMP3-203ENST00000409225 ITPRIPL2Q3MIP1 535 aa18.2■□□□□ 0.5
CHMP3-203ENST00000409225 ARHGAP15Q53QZ3 475 aa18.2■□□□□ 0.5
CHMP3-203ENST00000409225 BPIFB1Q8TDL5 484 aa18.2■□□□□ 0.5
CHMP3-203ENST00000409225 BHMT2Q9H2M3 363 aa18.2■□□□□ 0.5
CHMP3-203ENST00000409225 OBP2AQ9NY56 170 aa18.2■□□□□ 0.5
CHMP3-203ENST00000409225 CITO14578 2027 aa18.19■□□□□ 0.5
CHMP3-203ENST00000409225 AKAP3O75969 853 aa18.19■□□□□ 0.5
CHMP3-203ENST00000409225 GABRR2P28476 465 aa18.19■□□□□ 0.5
CHMP3-203ENST00000409225 NPTX2P47972 431 aa18.19■□□□□ 0.5
CHMP3-203ENST00000409225 CYP4F8P98187 520 aa18.19■□□□□ 0.5
CHMP3-203ENST00000409225 ZNF252P-AS1Q0IIN9 211 aa18.19■□□□□ 0.5
CHMP3-203ENST00000409225 ECM1Q16610 540 aa18.19■□□□□ 0.5
CHMP3-203ENST00000409225 PLK5Q496M5 336 aa18.19■□□□□ 0.5
CHMP3-203ENST00000409225 SEZ6Q53EL9 994 aa18.19■□□□□ 0.5
CHMP3-203ENST00000409225 FSTL4Q6MZW2 842 aa18.19■□□□□ 0.5
CHMP3-203ENST00000409225 MPZL3Q6UWV2 235 aa18.19■□□□□ 0.5
CHMP3-203ENST00000409225 TAS1R3Q7RTX0 852 aa18.19■□□□□ 0.5
CHMP3-203ENST00000409225 DNAJB7Q7Z6W7 309 aaPredicted RBP18.19■□□□□ 0.5
CHMP3-203ENST00000409225 NUP210Q8TEM1 1887 aaPredicted RBP18.19■□□□□ 0.5
CHMP3-203ENST00000409225 ZC3H10Q96K80 434 aaKnown RBP18.19■□□□□ 0.5
CHMP3-203ENST00000409225 SMG9Q9H0W8 520 aaKnown RBP18.19■□□□□ 0.5
CHMP3-203ENST00000409225 C4orf47A7E2U8 309 aa18.18■□□□□ 0.5
CHMP3-203ENST00000409225 M0QZQ0 153 aa18.18■□□□□ 0.5
CHMP3-203ENST00000409225 ABLIM1O14639 778 aa18.18■□□□□ 0.5
CHMP3-203ENST00000409225 ATG13O75143 517 aa18.18■□□□□ 0.5
CHMP3-203ENST00000409225 OAZ2O95190 189 aa18.18■□□□□ 0.5
CHMP3-203ENST00000409225 PROZP22891 400 aa18.18■□□□□ 0.5
CHMP3-203ENST00000409225 CCT6AP40227 531 aaKnown RBP18.18■□□□□ 0.5
CHMP3-203ENST00000409225 MCM2P49736 904 aa18.18■□□□□ 0.5
CHMP3-203ENST00000409225 GRSF1Q12849 480 aaKnown RBP eCLIP18.18■□□□□ 0.5
CHMP3-203ENST00000409225 ACAP1Q15027 740 aa18.18■□□□□ 0.5
CHMP3-203ENST00000409225 USP37Q86T82 979 aa18.18■□□□□ 0.5
CHMP3-203ENST00000409225 TTC9BQ8N6N2 239 aa18.18■□□□□ 0.5
CHMP3-203ENST00000409225 KDF1Q8NAX2 398 aaPredicted RBP18.18■□□□□ 0.5
CHMP3-203ENST00000409225 ATAD1Q8NBU5 361 aa18.18■□□□□ 0.5
CHMP3-203ENST00000409225 PSMG2Q969U7 264 aa18.18■□□□□ 0.5
CHMP3-203ENST00000409225 ZBTB45Q96K62 511 aaPredicted RBP18.18■□□□□ 0.5
CHMP3-203ENST00000409225 HHIPQ96QV1 700 aa18.18■□□□□ 0.5
CHMP3-203ENST00000409225 DUSP15Q9H1R2 295 aaPredicted RBP18.18■□□□□ 0.5
CHMP3-203ENST00000409225 TMEM134Q9H6X4 195 aa18.18■□□□□ 0.5
CHMP3-203ENST00000409225 THG1LQ9NWX6 298 aaKnown RBP18.18■□□□□ 0.5
CHMP3-203ENST00000409225 ASB3Q9Y575 518 aa18.18■□□□□ 0.5
CHMP3-203ENST00000409225 ZFYVE26Q68DK2 2539 aa18.17■□□□□ 0.5
CHMP3-203ENST00000409225 MTMR11A4FU01 709 aa18.17■□□□□ 0.5
CHMP3-203ENST00000409225 OR6C75A6NL08 312 aa18.17■□□□□ 0.5
CHMP3-203ENST00000409225 FGF19O95750 216 aa18.17■□□□□ 0.5
CHMP3-203ENST00000409225 CREB5Q02930 508 aa18.17■□□□□ 0.5
CHMP3-203ENST00000409225 SPAG1Q07617 926 aa18.17■□□□□ 0.5
CHMP3-203ENST00000409225 GPR17Q13304 367 aa18.17■□□□□ 0.5
CHMP3-203ENST00000409225 DMP1Q13316 513 aaPredicted RBP18.17■□□□□ 0.5
CHMP3-203ENST00000409225 PTPAQ15257 358 aa18.17■□□□□ 0.5
CHMP3-203ENST00000409225 ELF2Q15723 593 aa18.17■□□□□ 0.5
CHMP3-203ENST00000409225 SLC10A6Q3KNW5 377 aa18.17■□□□□ 0.5
CHMP3-203ENST00000409225 TMEM196Q5HYL7 178 aa18.17■□□□□ 0.5
CHMP3-203ENST00000409225 CENPPQ6IPU0 288 aa18.17■□□□□ 0.5
CHMP3-203ENST00000409225 NECAB1Q8N987 351 aa18.17■□□□□ 0.5
CHMP3-203ENST00000409225 OXCT2Q9BYC2 517 aaPredicted RBP18.17■□□□□ 0.5
CHMP3-203ENST00000409225 TASP1Q9H6P5 420 aa18.17■□□□□ 0.5
CHMP3-203ENST00000409225 KMT5AQ9NQR1 393 aa18.17■□□□□ 0.5
CHMP3-203ENST00000409225 GKN1Q9NS71 199 aa18.17■□□□□ 0.5
CHMP3-203ENST00000409225 ANKFY1Q9P2R3 1169 aa18.17■□□□□ 0.5
CHMP3-203ENST00000409225 EML5Q05BV3 1969 aa18.17■□□□□ 0.5
CHMP3-203ENST00000409225 IGF2RP11717 2491 aa18.16■□□□□ 0.5
CHMP3-203ENST00000409225 DCLK1O15075 740 aa18.16■□□□□ 0.5
CHMP3-203ENST00000409225 RNF40O75150 1001 aa18.16■□□□□ 0.5
CHMP3-203ENST00000409225 CAVIN2O95810 425 aa18.16■□□□□ 0.5
CHMP3-203ENST00000409225 TOP3BO95985 862 aaKnown RBP18.16■□□□□ 0.5
CHMP3-203ENST00000409225 EGFP01133 1207 aa18.16■□□□□ 0.5
CHMP3-203ENST00000409225 OR52Z1P0C646 297 aa18.16■□□□□ 0.5
CHMP3-203ENST00000409225 TRIM29Q14134 588 aa18.16■□□□□ 0.5
CHMP3-203ENST00000409225 ZNF174Q15697 407 aa18.16■□□□□ 0.5
CHMP3-203ENST00000409225 SH3PXD2AQ5TCZ1 1133 aa18.16■□□□□ 0.5
CHMP3-203ENST00000409225 HAUS3Q68CZ6 603 aa18.16■□□□□ 0.5
CHMP3-203ENST00000409225 DSTYKQ6XUX3 929 aa18.16■□□□□ 0.5
CHMP3-203ENST00000409225 ITIH5Q86UX2 942 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms