RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 DHX35Q9H5Z1 703 aaKnown RBP14.84□□□□□ -0.03
SCAF4-202ENST00000399804 ZNF112Q9UJU3 913 aa14.84□□□□□ -0.03
SCAF4-202ENST00000399804 PCDHGC5Q9Y5F6 944 aa14.84□□□□□ -0.03
SCAF4-202ENST00000399804 NHSQ6T4R5 1651 aa14.83□□□□□ -0.03
SCAF4-202ENST00000399804 BTBD19C9JJ37 291 aa14.83□□□□□ -0.03
SCAF4-202ENST00000399804 ANKRD65E5RJM6 399 aa14.83□□□□□ -0.03
SCAF4-202ENST00000399804 RALAP11233 206 aa14.83□□□□□ -0.03
SCAF4-202ENST00000399804 CENPUQ71F23 418 aa14.83□□□□□ -0.03
SCAF4-202ENST00000399804 ZC3H18Q86VM9 953 aaKnown RBP14.83□□□□□ -0.03
SCAF4-202ENST00000399804 C12orf56Q8IXR9 622 aa14.83□□□□□ -0.03
SCAF4-202ENST00000399804 RCOR2Q8IZ40 523 aa14.83□□□□□ -0.03
SCAF4-202ENST00000399804 LNX1Q8TBB1 728 aaPredicted RBP14.83□□□□□ -0.03
SCAF4-202ENST00000399804 PYROXD1Q8WU10 500 aa14.83□□□□□ -0.03
SCAF4-202ENST00000399804 NSMCE1Q8WV22 266 aa14.83□□□□□ -0.03
SCAF4-202ENST00000399804 CFAP57Q96MR6 1250 aa14.83□□□□□ -0.03
SCAF4-202ENST00000399804 MANSC4A6NHS7 340 aaPredicted RBP14.83□□□□□ -0.04
SCAF4-202ENST00000399804 NKRFO15226 690 aaKnown RBP eCLIP14.83□□□□□ -0.04
SCAF4-202ENST00000399804 ITGA4P13612 1032 aa14.83□□□□□ -0.04
SCAF4-202ENST00000399804 MAPK7Q13164 816 aa14.83□□□□□ -0.04
SCAF4-202ENST00000399804 IQSEC1Q6DN90 963 aa14.83□□□□□ -0.04
SCAF4-202ENST00000399804 ARHGEF18Q6ZSZ5 1173 aa14.83□□□□□ -0.04
SCAF4-202ENST00000399804 PLPPR4Q7Z2D5 763 aa14.83□□□□□ -0.04
SCAF4-202ENST00000399804 GPR142Q7Z601 462 aa14.83□□□□□ -0.04
SCAF4-202ENST00000399804 TLK2Q86UE8 772 aa14.83□□□□□ -0.04
SCAF4-202ENST00000399804 OR5B17Q8NGF7 314 aa14.83□□□□□ -0.04
SCAF4-202ENST00000399804 ERP44Q9BS26 406 aa14.83□□□□□ -0.04
SCAF4-202ENST00000399804 TMEM51Q9NW97 253 aa14.83□□□□□ -0.04
SCAF4-202ENST00000399804 MYH1P12882 1939 aa14.83□□□□□ -0.04
SCAF4-202ENST00000399804 SETDB1Q15047 1291 aa14.83□□□□□ -0.04
SCAF4-202ENST00000399804 TMED2Q15363 201 aa14.83□□□□□ -0.04
SCAF4-202ENST00000399804 STILQ15468 1287 aa14.83□□□□□ -0.04
SCAF4-202ENST00000399804 DCAF4L1Q3SXM0 396 aa14.83□□□□□ -0.04
SCAF4-202ENST00000399804 GPR20Q99678 358 aa14.83□□□□□ -0.04
SCAF4-202ENST00000399804 NCAPGQ9BPX3 1015 aa14.83□□□□□ -0.04
SCAF4-202ENST00000399804 XPNPEP1Q9NQW7 623 aa14.83□□□□□ -0.04
SCAF4-202ENST00000399804 RBPJLQ9UBG7 517 aa14.83□□□□□ -0.04
SCAF4-202ENST00000399804 A0A0G2JLL6 359 aaPredicted RBP14.82□□□□□ -0.04
SCAF4-202ENST00000399804 ALDH3A1P30838 453 aa14.82□□□□□ -0.04
SCAF4-202ENST00000399804 TNFSF9P41273 254 aa14.82□□□□□ -0.04
SCAF4-202ENST00000399804 FCGRTP55899 365 aa14.82□□□□□ -0.04
SCAF4-202ENST00000399804 C6orf118Q5T5N4 469 aa14.82□□□□□ -0.04
SCAF4-202ENST00000399804 PRRT2Q7Z6L0 340 aaPredicted RBP14.82□□□□□ -0.04
SCAF4-202ENST00000399804 ACOT1Q86TX2 421 aa14.82□□□□□ -0.04
SCAF4-202ENST00000399804 ACTRT1Q8TDG2 376 aa14.82□□□□□ -0.04
SCAF4-202ENST00000399804 RUBCNQ92622 972 aa14.82□□□□□ -0.04
SCAF4-202ENST00000399804 HPCAL4Q9UM19 191 aa14.82□□□□□ -0.04
SCAF4-202ENST00000399804 INHBAP08476 426 aa14.82□□□□□ -0.04
SCAF4-202ENST00000399804 ZACNQ401N2 412 aa14.82□□□□□ -0.04
SCAF4-202ENST00000399804 IZUMO3Q5VZ72 239 aa14.82□□□□□ -0.04
SCAF4-202ENST00000399804 KIAA1841Q6NSI8 718 aa14.82□□□□□ -0.04
SCAF4-202ENST00000399804 NT5DC3Q86UY8 548 aa14.82□□□□□ -0.04
SCAF4-202ENST00000399804 FAM71AQ8IYT1 594 aa14.82□□□□□ -0.04
SCAF4-202ENST00000399804 MCOLN2Q8IZK6 566 aa14.82□□□□□ -0.04
SCAF4-202ENST00000399804 SHC3Q92529 594 aa14.82□□□□□ -0.04
SCAF4-202ENST00000399804 VIPAS39Q9H9C1 493 aa14.82□□□□□ -0.04
SCAF4-202ENST00000399804 SNTG2Q9NY99 539 aa14.82□□□□□ -0.04
SCAF4-202ENST00000399804 UBQLN1Q9UMX0 589 aaKnown RBP14.82□□□□□ -0.04
SCAF4-202ENST00000399804 ZSCAN5CA6NGD5 496 aaPredicted RBP14.82□□□□□ -0.04
SCAF4-202ENST00000399804 GLI1P08151 1106 aa14.82□□□□□ -0.04
SCAF4-202ENST00000399804 ARSEP51690 589 aa14.82□□□□□ -0.04
SCAF4-202ENST00000399804 RPTORQ8N122 1335 aa14.82□□□□□ -0.04
SCAF4-202ENST00000399804 THEM5Q8N1Q8 247 aa14.82□□□□□ -0.04
SCAF4-202ENST00000399804 CEP120Q8N960 986 aa14.82□□□□□ -0.04
SCAF4-202ENST00000399804 RNF139Q8WU17 664 aa14.82□□□□□ -0.04
SCAF4-202ENST00000399804 SEMA4DQ92854 862 aa14.82□□□□□ -0.04
SCAF4-202ENST00000399804 TRIM7Q9C029 511 aa14.82□□□□□ -0.04
SCAF4-202ENST00000399804 LACTBL1A8MY62 500 aa14.81□□□□□ -0.04
SCAF4-202ENST00000399804 B4GALT5O43286 388 aa14.81□□□□□ -0.04
SCAF4-202ENST00000399804 MCF2P10911 925 aa14.81□□□□□ -0.04
SCAF4-202ENST00000399804 ICAM3P32942 547 aa14.81□□□□□ -0.04
SCAF4-202ENST00000399804 GNL1P36915 607 aaPredicted RBP14.81□□□□□ -0.04
SCAF4-202ENST00000399804 MAGOHP61326 146 aaKnown RBP14.81□□□□□ -0.04
SCAF4-202ENST00000399804 BEX3Q00994 111 aa14.81□□□□□ -0.04
SCAF4-202ENST00000399804 NME3Q13232 169 aa14.81□□□□□ -0.04
SCAF4-202ENST00000399804 TDRD10Q5VZ19 366 aaKnown RBP14.81□□□□□ -0.04
SCAF4-202ENST00000399804 EEF1DP3Q658K8 133 aa14.81□□□□□ -0.04
SCAF4-202ENST00000399804 C1orf228Q6PIY5 440 aa14.81□□□□□ -0.04
SCAF4-202ENST00000399804 ZNF662Q6ZS27 426 aa14.81□□□□□ -0.04
SCAF4-202ENST00000399804 ZSWIM2Q8NEG5 633 aa14.81□□□□□ -0.04
SCAF4-202ENST00000399804 CASKIN2Q8WXE0 1202 aa14.81□□□□□ -0.04
SCAF4-202ENST00000399804 FAF2Q96CS3 445 aa14.81□□□□□ -0.04
SCAF4-202ENST00000399804 ISCUQ9H1K1 167 aa14.81□□□□□ -0.04
SCAF4-202ENST00000399804 DMAC2Q9NW81 257 aa14.81□□□□□ -0.04
SCAF4-202ENST00000399804 STAP1Q9ULZ2 295 aa14.81□□□□□ -0.04
SCAF4-202ENST00000399804 CREB3O43889 395 aa14.81□□□□□ -0.04
SCAF4-202ENST00000399804 ADCY2Q08462 1091 aa14.81□□□□□ -0.04
SCAF4-202ENST00000399804 SH3D19Q5HYK7 790 aa14.81□□□□□ -0.04
SCAF4-202ENST00000399804 GKAP1Q5VSY0 366 aaPredicted RBP14.81□□□□□ -0.04
SCAF4-202ENST00000399804 SH2D3CQ8N5H7 860 aa14.81□□□□□ -0.04
SCAF4-202ENST00000399804 ATG4AQ8WYN0 398 aa14.81□□□□□ -0.04
SCAF4-202ENST00000399804 SNF8Q96H20 258 aa14.81□□□□□ -0.04
SCAF4-202ENST00000399804 DHX33Q9H6R0 707 aaKnown RBP14.81□□□□□ -0.04
SCAF4-202ENST00000399804 METTL5Q9NRN9 209 aaKnown RBP14.81□□□□□ -0.04
SCAF4-202ENST00000399804 RNF19AQ9NV58 838 aa14.81□□□□□ -0.04
SCAF4-202ENST00000399804 ARHGAP28Q9P2N2 729 aa14.81□□□□□ -0.04
SCAF4-202ENST00000399804 MAGED2Q9UNF1 606 aaPredicted RBP14.81□□□□□ -0.04
SCAF4-202ENST00000399804 TIAM2Q8IVF5 1701 aa14.81□□□□□ -0.04
SCAF4-202ENST00000399804 NFIL3Q16649 462 aa14.81□□□□□ -0.04
SCAF4-202ENST00000399804 CEP57Q86XR8 500 aa14.81□□□□□ -0.04
SCAF4-202ENST00000399804 CCDC117Q8IWD4 279 aaPredicted RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms