RNA–Protein interactions for RNA: ENST00000398316.7

FNDC3A-202, Transcript of fibronectin type III domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene FNDC3A, Length 5,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-202ENST00000398316 CNGA2Q16280 664 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 CNGA4Q8IV77 575 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 TPH2Q8IWU9 490 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 ZNF683Q8IZ20 524 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 RASGEF1CQ8N431 466 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 PPM1EQ8WY54 764 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 SEPT8Q92599 483 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 ZNF560Q96MR9 790 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 GRPEL1Q9HAV7 217 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 ZFP37Q9Y6Q3 630 aaPredicted RBP3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 CACNG3O60359 315 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 DDX6P26196 483 aaKnown RBP eCLIP3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 TNFRSF8P28908 595 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 PPM1AP35813 382 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 MAGEA6P43360 314 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 TUBB4BP68371 445 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 FANCCQ00597 558 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 SEMA3BQ13214 749 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 CBX2Q14781 532 aaPredicted RBP3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 CLUL1Q15846 466 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 ALG1LQ6GMV1 187 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 MON1BQ7L1V2 547 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 POLNQ7Z5Q5 900 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 LRRC43Q8N309 656 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 C7orf31Q8N865 590 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 LRRC57Q8N9N7 239 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 GLIS3Q8NEA6 775 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 LMLNQ96KR4 655 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 HSFY1Q96LI6 401 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 TUBGCP2Q9BSJ2 902 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 VN1R3Q9BXE9 311 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 AGO3Q9H9G7 860 aaKnown RBP3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 SEPT11Q9NVA2 429 aaKnown RBP3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 CPSF2Q9P2I0 782 aaKnown RBP3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 CDH9Q9ULB4 789 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 ASB3Q9Y575 518 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 TP53BP1Q12888 1972 aaPredicted RBP3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 CACNA1GO43497 2377 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 SMIM28A0A1B0GU29 152 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 PEX10O60683 326 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 UQCRHP07919 91 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 STAG3L1P0CL83 205 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 EPB41P11171 864 aaKnown RBP3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 RAG1P15918 1043 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 FERP16591 822 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 LAG3P18627 525 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 PTPN9P43378 593 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 RAB33AQ14088 237 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 MANEALQ5VSG8 457 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 SASS6Q6UVJ0 657 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 CCDC186Q7Z3E2 898 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 TCEAL8Q8IYN2 117 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 FBXL13Q8NEE6 735 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 MICAL1Q8TDZ2 1067 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 RTP4Q96DX8 246 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 TRIM11Q96F44 468 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 MSANTD3Q96H12 275 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 KREMEN1Q96MU8 473 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 PRKD2Q9BZL6 878 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 CDHR5Q9HBB8 845 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 TTLL13PA6NNM8 815 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 K7ERI5 159 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 ZNF286BP0CG31 522 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 ZSCAN20P17040 1043 aaPredicted RBP3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 NMT1P30419 496 aaKnown RBP3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 ASIC1P78348 528 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 TOGARAM2Q6ZUX3 1019 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 FAM186BQ8IYM0 893 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 TEKT4Q8WW24 435 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 RPS6KC1Q96S38 1066 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 APOBEC3GQ9HC16 384 aaKnown RBP3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 TOPORSQ9NS56 1045 aaPredicted RBP3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 PADI3Q9ULW8 664 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 ST3GAL5Q9UNP4 418 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 NFE2L3Q9Y4A8 694 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 SAMM50Q9Y512 469 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 TET1Q8NFU7 2136 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 IGLV3-10A0A075B6K4 115 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 GOLGA6L9A6NEM1 432 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 DYNC1LI2O43237 492 aaPredicted RBP3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 GREM1O60565 184 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 SERPING1P05155 500 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 CYP2B6P20813 491 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 MATR3P43243 847 aaKnown RBP eCLIP3.92□□□□□ -1.781e-6■■■□□ 18.6
FNDC3A-202ENST00000398316 LHX1P48742 406 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 BIRC2Q13490 618 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 CYP1B1Q16678 543 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 ZNF568Q3ZCX4 644 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 SV2CQ496J9 727 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 GLYCTKQ8IVS8 523 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 CCDC117Q8IWD4 279 aaPredicted RBP3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 ACRBPQ8NEB7 543 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 ZMAT2Q96NC0 199 aaKnown RBP3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 IER2Q9BTL4 223 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 TRIM62Q9BVG3 475 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 NIF3L1Q9GZT8 377 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 STARD7Q9NQZ5 370 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 ENAMQ9NRM1 1142 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms