RNA–Protein interactions for RNA: ENST00000394083.6

GAPVD1-204, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 4,747 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-204ENST00000394083 IGDCC3Q8IVU1 814 aa9.03□□□□□ -0.96
GAPVD1-204ENST00000394083 C12orf50Q8NA57 414 aaPredicted RBP9.03□□□□□ -0.96
GAPVD1-204ENST00000394083 SMG8Q8ND04 991 aaKnown RBP9.03□□□□□ -0.96
GAPVD1-204ENST00000394083 CISHQ9NSE2 258 aa9.03□□□□□ -0.96
GAPVD1-204ENST00000394083 MIOSQ9NXC5 875 aa9.03□□□□□ -0.96
GAPVD1-204ENST00000394083 RTN2O75298 545 aa9.03□□□□□ -0.96
GAPVD1-204ENST00000394083 PPFIA2O75334 1257 aa9.03□□□□□ -0.96
GAPVD1-204ENST00000394083 H2AFZP0C0S5 128 aa9.03□□□□□ -0.96
GAPVD1-204ENST00000394083 TCP1P17987 556 aaKnown RBP9.03□□□□□ -0.96
GAPVD1-204ENST00000394083 IHHQ14623 411 aa9.03□□□□□ -0.96
GAPVD1-204ENST00000394083 OASLQ15646 514 aaKnown RBP9.03□□□□□ -0.96
GAPVD1-204ENST00000394083 KCTD16Q68DU8 428 aa9.03□□□□□ -0.96
GAPVD1-204ENST00000394083 EFCAB12Q6NXP0 572 aa9.03□□□□□ -0.96
GAPVD1-204ENST00000394083 H2AFVQ71UI9 128 aa9.03□□□□□ -0.96
GAPVD1-204ENST00000394083 ZC3H15Q8WU90 426 aaKnown RBP9.03□□□□□ -0.96
GAPVD1-204ENST00000394083 NFKBIZQ9BYH8 718 aa9.03□□□□□ -0.96
GAPVD1-204ENST00000394083 PCYOX1Q9UHG3 505 aa9.03□□□□□ -0.96
GAPVD1-204ENST00000394083 IVNS1ABPQ9Y6Y0 642 aa9.03□□□□□ -0.96
GAPVD1-204ENST00000394083 A0A1B0GUA9 196 aa9.03□□□□□ -0.96
GAPVD1-204ENST00000394083 LRRIQ4A6NIV6 560 aa9.03□□□□□ -0.96
GAPVD1-204ENST00000394083 TGFB3P10600 412 aa9.03□□□□□ -0.96
GAPVD1-204ENST00000394083 ATF7P17544 494 aaPredicted RBP9.03□□□□□ -0.96
GAPVD1-204ENST00000394083 IFI35P80217 286 aaPredicted RBP9.03□□□□□ -0.96
GAPVD1-204ENST00000394083 MTHFD1LQ6UB35 978 aa9.03□□□□□ -0.96
GAPVD1-204ENST00000394083 ABRAQ8N0Z2 381 aa9.03□□□□□ -0.96
GAPVD1-204ENST00000394083 ZSCAN18Q8TBC5 510 aaPredicted RBP9.03□□□□□ -0.96
GAPVD1-204ENST00000394083 MZB1Q8WU39 189 aa9.03□□□□□ -0.96
GAPVD1-204ENST00000394083 SEPT1Q8WYJ6 367 aa9.03□□□□□ -0.96
GAPVD1-204ENST00000394083 ATP2A3Q93084 1043 aa9.03□□□□□ -0.96
GAPVD1-204ENST00000394083 SPAG5Q96R06 1193 aa9.03□□□□□ -0.96
GAPVD1-204ENST00000394083 MAP7D2Q96T17 732 aa9.03□□□□□ -0.96
GAPVD1-204ENST00000394083 B3GNT5Q9BYG0 378 aa9.03□□□□□ -0.96
GAPVD1-204ENST00000394083 NXF3Q9H4D5 531 aaKnown RBP9.03□□□□□ -0.96
GAPVD1-204ENST00000394083 RABEP2Q9H5N1 569 aa9.03□□□□□ -0.96
GAPVD1-204ENST00000394083 AS3MTQ9HBK9 375 aa9.03□□□□□ -0.96
GAPVD1-204ENST00000394083 LRCH4O75427 683 aa9.03□□□□□ -0.96
GAPVD1-204ENST00000394083 ENDOD1O94919 500 aa9.03□□□□□ -0.96
GAPVD1-204ENST00000394083 MMS22LQ6ZRQ5 1243 aa9.03□□□□□ -0.96
GAPVD1-204ENST00000394083 C1orf131Q8NDD1 294 aaKnown RBP9.03□□□□□ -0.96
GAPVD1-204ENST00000394083 PPTC7Q8NI37 304 aa9.03□□□□□ -0.96
GAPVD1-204ENST00000394083 SPATA33Q96N06 139 aa9.03□□□□□ -0.96
GAPVD1-204ENST00000394083 CARD9Q9H257 536 aa9.03□□□□□ -0.96
GAPVD1-204ENST00000394083 GABRQQ9UN88 632 aa9.03□□□□□ -0.96
GAPVD1-204ENST00000394083 FRMD4BQ9Y2L6 1034 aa9.03□□□□□ -0.96
GAPVD1-204ENST00000394083 DCHS1Q96JQ0 3298 aa9.02□□□□□ -0.96
GAPVD1-204ENST00000394083 PIK3R2O00459 728 aa9.02□□□□□ -0.96
GAPVD1-204ENST00000394083 TREHO43280 583 aa9.02□□□□□ -0.96
GAPVD1-204ENST00000394083 B4GALT4O60513 344 aa9.02□□□□□ -0.96
GAPVD1-204ENST00000394083 RPL13P26373 211 aaKnown RBP9.02□□□□□ -0.96
GAPVD1-204ENST00000394083 FAM187BQ17R55 369 aa9.02□□□□□ -0.96
GAPVD1-204ENST00000394083 SND1Q7KZF4 910 aaKnown RBP eCLIP9.02□□□□□ -0.96
GAPVD1-204ENST00000394083 EMC1Q8N766 993 aa9.02□□□□□ -0.96
GAPVD1-204ENST00000394083 IQCDQ96DY2 449 aa9.02□□□□□ -0.96
GAPVD1-204ENST00000394083 RTP3Q9BQQ7 232 aa9.02□□□□□ -0.96
GAPVD1-204ENST00000394083 GTPBP4Q9BZE4 634 aaKnown RBP9.02□□□□□ -0.96
GAPVD1-204ENST00000394083 TOM1L1O75674 476 aa9.02□□□□□ -0.97
GAPVD1-204ENST00000394083 TXNP10599 105 aaKnown RBP9.02□□□□□ -0.97
GAPVD1-204ENST00000394083 GTF2H1P32780 548 aa9.02□□□□□ -0.97
GAPVD1-204ENST00000394083 SLC10A2Q12908 348 aaPredicted RBP9.02□□□□□ -0.97
GAPVD1-204ENST00000394083 CA9Q16790 459 aa9.02□□□□□ -0.97
GAPVD1-204ENST00000394083 XKR4Q5GH76 650 aa9.02□□□□□ -0.97
GAPVD1-204ENST00000394083 TMCO3Q6UWJ1 677 aa9.02□□□□□ -0.97
GAPVD1-204ENST00000394083 C17orf99Q6UX52 265 aa9.02□□□□□ -0.97
GAPVD1-204ENST00000394083 PHF13Q86YI8 300 aaPredicted RBP9.02□□□□□ -0.97
GAPVD1-204ENST00000394083 RASAL3Q86YV0 1011 aa9.02□□□□□ -0.97
GAPVD1-204ENST00000394083 TLCD1Q96CP7 247 aa9.02□□□□□ -0.97
GAPVD1-204ENST00000394083 TIPINQ9BVW5 301 aa9.02□□□□□ -0.97
GAPVD1-204ENST00000394083 TSGA10Q9BZW7 698 aa9.02□□□□□ -0.97
GAPVD1-204ENST00000394083 ATP8B1O43520 1251 aa9.02□□□□□ -0.97
GAPVD1-204ENST00000394083 F2P00734 622 aa9.02□□□□□ -0.97
GAPVD1-204ENST00000394083 GH1P01241 217 aa9.02□□□□□ -0.97
GAPVD1-204ENST00000394083 PECAM1P16284 738 aaPredicted RBP9.02□□□□□ -0.97
GAPVD1-204ENST00000394083 POLGP54098 1239 aaPredicted RBP9.02□□□□□ -0.97
GAPVD1-204ENST00000394083 NCOA4Q13772 614 aa9.02□□□□□ -0.97
GAPVD1-204ENST00000394083 MBTPS1Q14703 1052 aa9.02□□□□□ -0.97
GAPVD1-204ENST00000394083 ZNF564Q8TBZ8 553 aaPredicted RBP9.02□□□□□ -0.97
GAPVD1-204ENST00000394083 C1orf54Q8WWF1 131 aa9.02□□□□□ -0.97
GAPVD1-204ENST00000394083 HVCN1Q96D96 273 aa9.02□□□□□ -0.97
GAPVD1-204ENST00000394083 MRPL45Q9BRJ2 306 aaKnown RBP9.02□□□□□ -0.97
GAPVD1-204ENST00000394083 SETD4Q9NVD3 440 aa9.02□□□□□ -0.97
GAPVD1-204ENST00000394083 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.02□□□□□ -0.97
GAPVD1-204ENST00000394083 A6NJR5 290 aa9.02□□□□□ -0.97
GAPVD1-204ENST00000394083 BEX3Q00994 111 aa9.02□□□□□ -0.97
GAPVD1-204ENST00000394083 ENPEPQ07075 957 aa9.02□□□□□ -0.97
GAPVD1-204ENST00000394083 MESDQ14696 234 aa9.02□□□□□ -0.97
GAPVD1-204ENST00000394083 ANKRD22Q5VYY1 191 aa9.02□□□□□ -0.97
GAPVD1-204ENST00000394083 TMEM270Q6UE05 265 aa9.02□□□□□ -0.97
GAPVD1-204ENST00000394083 SH2D5Q6ZV89 423 aa9.02□□□□□ -0.97
GAPVD1-204ENST00000394083 JAMLQ86YT9 394 aa9.02□□□□□ -0.97
GAPVD1-204ENST00000394083 SYCP3Q8IZU3 236 aa9.02□□□□□ -0.97
GAPVD1-204ENST00000394083 ATXN2LQ8WWM7 1075 aaKnown RBP9.02□□□□□ -0.97
GAPVD1-204ENST00000394083 BBXQ8WY36 941 aaPredicted RBP9.02□□□□□ -0.97
GAPVD1-204ENST00000394083 USP3Q9Y6I4 520 aa9.02□□□□□ -0.97
GAPVD1-204ENST00000394083 MTM1Q13496 603 aa9.01□□□□□ -0.97
GAPVD1-204ENST00000394083 SPA17Q15506 151 aa9.01□□□□□ -0.97
GAPVD1-204ENST00000394083 ZNF534Q76KX8 674 aa9.01□□□□□ -0.97
GAPVD1-204ENST00000394083 SAPCD2Q86UD0 394 aa9.01□□□□□ -0.97
GAPVD1-204ENST00000394083 XYLT1Q86Y38 959 aa9.01□□□□□ -0.97
GAPVD1-204ENST00000394083 SLCO2A1Q92959 643 aa9.01□□□□□ -0.97
GAPVD1-204ENST00000394083 ACKR2O00590 384 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms