RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 CYP3A43Q9HB55 503 aa28.66■■■□□ 2.18
MSX1-201ENST00000382723 TAS2R14Q9NYV8 317 aa28.66■■■□□ 2.18
MSX1-201ENST00000382723 GNG11P61952 73 aa28.65■■■□□ 2.18
MSX1-201ENST00000382723 SYT10Q6XYQ8 523 aa28.65■■■□□ 2.18
MSX1-201ENST00000382723 ZNF662Q6ZS27 426 aa28.65■■■□□ 2.18
MSX1-201ENST00000382723 NECAB2Q7Z6G3 386 aa28.65■■■□□ 2.18
MSX1-201ENST00000382723 ZNF560Q96MR9 790 aa28.65■■■□□ 2.18
MSX1-201ENST00000382723 TSGA10Q9BZW7 698 aa28.65■■■□□ 2.18
MSX1-201ENST00000382723 TBX21Q9UL17 535 aa28.65■■■□□ 2.18
MSX1-201ENST00000382723 MACROD2A1Z1Q3 448 aa28.65■■■□□ 2.18
MSX1-201ENST00000382723 KIF5CO60282 957 aa28.65■■■□□ 2.18
MSX1-201ENST00000382723 LRPAP1P30533 357 aa28.65■■■□□ 2.18
MSX1-201ENST00000382723 SSTR3P32745 418 aaPredicted RBP28.65■■■□□ 2.18
MSX1-201ENST00000382723 ORC1Q13415 861 aa28.65■■■□□ 2.18
MSX1-201ENST00000382723 TCTN1Q2MV58 587 aa28.65■■■□□ 2.18
MSX1-201ENST00000382723 DEFB128Q7Z7B8 93 aa28.65■■■□□ 2.18
MSX1-201ENST00000382723 TXLNBQ8N3L3 684 aa28.65■■■□□ 2.18
MSX1-201ENST00000382723 PAXBP1Q9Y5B6 917 aa28.65■■■□□ 2.18
MSX1-201ENST00000382723 PDCD11Q14690 1871 aaKnown RBP28.64■■■□□ 2.18
MSX1-201ENST00000382723 SPTLC1O15269 473 aa28.64■■■□□ 2.18
MSX1-201ENST00000382723 THAP12O43422 761 aa28.64■■■□□ 2.18
MSX1-201ENST00000382723 EOMESO95936 686 aa28.64■■■□□ 2.18
MSX1-201ENST00000382723 CLTBP09497 229 aa28.64■■■□□ 2.18
MSX1-201ENST00000382723 FAM189BP81408 668 aa28.64■■■□□ 2.18
MSX1-201ENST00000382723 HMGXB4Q9UGU5 601 aa28.64■■■□□ 2.18
MSX1-201ENST00000382723 ENPP3O14638 875 aa28.63■■■□□ 2.17
MSX1-201ENST00000382723 PJA2O43164 708 aa28.63■■■□□ 2.17
MSX1-201ENST00000382723 PNPLA4P41247 253 aa28.63■■■□□ 2.17
MSX1-201ENST00000382723 TAF6P49848 677 aa28.63■■■□□ 2.17
MSX1-201ENST00000382723 ETF1P62495 437 aaKnown RBP28.63■■■□□ 2.17
MSX1-201ENST00000382723 RABGGTAQ92696 567 aa28.63■■■□□ 2.17
MSX1-201ENST00000382723 PDCL3Q9H2J4 239 aa28.63■■■□□ 2.17
MSX1-201ENST00000382723 DNAI1Q9UI46 699 aa28.63■■■□□ 2.17
MSX1-201ENST00000382723 CASTOR2A6NHX0 329 aa28.63■■■□□ 2.17
MSX1-201ENST00000382723 KPNA7A9QM74 516 aa28.63■■■□□ 2.17
MSX1-201ENST00000382723 KIF2AO00139 706 aaPredicted RBP28.63■■■□□ 2.17
MSX1-201ENST00000382723 ZNF677Q86XU0 584 aa28.63■■■□□ 2.17
MSX1-201ENST00000382723 APBB2Q92870 758 aa28.63■■■□□ 2.17
MSX1-201ENST00000382723 CILPO75339 1184 aa28.62■■■□□ 2.17
MSX1-201ENST00000382723 H2AFZP0C0S5 128 aa28.62■■■□□ 2.17
MSX1-201ENST00000382723 FGFR1P11362 822 aa28.62■■■□□ 2.17
MSX1-201ENST00000382723 CLCNKBP51801 687 aa28.62■■■□□ 2.17
MSX1-201ENST00000382723 SV2CQ496J9 727 aa28.62■■■□□ 2.17
MSX1-201ENST00000382723 ZNF569Q5MCW4 686 aa28.62■■■□□ 2.17
MSX1-201ENST00000382723 H2AFVQ71UI9 128 aa28.62■■■□□ 2.17
MSX1-201ENST00000382723 TWNKQ96RR1 684 aa28.62■■■□□ 2.17
MSX1-201ENST00000382723 IGFBP6P24592 240 aaPredicted RBP28.61■■■□□ 2.17
MSX1-201ENST00000382723 BRD2P25440 801 aaKnown RBP28.61■■■□□ 2.17
MSX1-201ENST00000382723 LILRA4P59901 499 aa28.61■■■□□ 2.17
MSX1-201ENST00000382723 GLB1LQ6UWU2 654 aa28.61■■■□□ 2.17
MSX1-201ENST00000382723 WHAMMQ8TF30 809 aa28.61■■■□□ 2.17
MSX1-201ENST00000382723 WDR24Q96S15 920 aa28.61■■■□□ 2.17
MSX1-201ENST00000382723 MRPL45Q9BRJ2 306 aaKnown RBP28.61■■■□□ 2.17
MSX1-201ENST00000382723 PARNO95453 639 aaKnown RBP28.61■■■□□ 2.17
MSX1-201ENST00000382723 CXCL10P02778 98 aa28.61■■■□□ 2.17
MSX1-201ENST00000382723 CFHP08603 1231 aa28.61■■■□□ 2.17
MSX1-201ENST00000382723 RAD23BP54727 409 aa28.61■■■□□ 2.17
MSX1-201ENST00000382723 GALCP54803 685 aa28.61■■■□□ 2.17
MSX1-201ENST00000382723 GRIK3Q13003 919 aa28.61■■■□□ 2.17
MSX1-201ENST00000382723 CLLU1OSQ5K130 101 aa28.61■■■□□ 2.17
MSX1-201ENST00000382723 ZNF606Q8WXB4 792 aa28.61■■■□□ 2.17
MSX1-201ENST00000382723 PRDM5Q9NQX1 630 aaPredicted RBP28.61■■■□□ 2.17
MSX1-201ENST00000382723 BARX2Q9UMQ3 279 aaPredicted RBP28.61■■■□□ 2.17
MSX1-201ENST00000382723 PODXLO00592 558 aa28.6■■■□□ 2.17
MSX1-201ENST00000382723 CD19P15391 556 aa28.6■■■□□ 2.17
MSX1-201ENST00000382723 ABCB4P21439 1286 aa28.6■■■□□ 2.17
MSX1-201ENST00000382723 NDST1P52848 882 aa28.6■■■□□ 2.17
MSX1-201ENST00000382723 SOWAHAQ2M3V2 549 aa28.6■■■□□ 2.17
MSX1-201ENST00000382723 PASD1Q8IV76 773 aa28.6■■■□□ 2.17
MSX1-201ENST00000382723 SECISBP2LQ93073 1101 aaKnown RBP28.6■■■□□ 2.17
MSX1-201ENST00000382723 PAAF1Q9BRP4 392 aa28.6■■■□□ 2.17
MSX1-201ENST00000382723 ELOVL4Q9GZR5 314 aa28.6■■■□□ 2.17
MSX1-201ENST00000382723 FTLP02792 175 aaPredicted RBP28.59■■■□□ 2.17
MSX1-201ENST00000382723 INCA1Q0VD86 236 aa28.59■■■□□ 2.17
MSX1-201ENST00000382723 SLC4A11Q8NBS3 891 aa28.59■■■□□ 2.17
MSX1-201ENST00000382723 PRDM10Q9NQV6 1147 aa28.59■■■□□ 2.17
MSX1-201ENST00000382723 TMEM161AQ9NX61 479 aa28.59■■■□□ 2.17
MSX1-201ENST00000382723 GDAP2Q9NXN4 497 aa28.59■■■□□ 2.17
MSX1-201ENST00000382723 SALL4Q9UJQ4 1053 aa28.59■■■□□ 2.17
MSX1-201ENST00000382723 SCN1AP35498 2009 aa28.59■■■□□ 2.17
MSX1-201ENST00000382723 RTN2O75298 545 aa28.59■■■□□ 2.17
MSX1-201ENST00000382723 CLEC16AQ2KHT3 1053 aa28.59■■■□□ 2.17
MSX1-201ENST00000382723 TFAP2BQ92481 460 aa28.59■■■□□ 2.17
MSX1-201ENST00000382723 TMEM176AQ96HP8 235 aa28.59■■■□□ 2.17
MSX1-201ENST00000382723 ZSWIM1Q9BR11 485 aa28.59■■■□□ 2.17
MSX1-201ENST00000382723 PCDHB7Q9Y5E2 793 aa28.59■■■□□ 2.17
MSX1-201ENST00000382723 BUB1O43683 1085 aa28.58■■■□□ 2.17
MSX1-201ENST00000382723 MOCS3O95396 460 aa28.58■■■□□ 2.17
MSX1-201ENST00000382723 TUBB4AP04350 444 aa28.58■■■□□ 2.17
MSX1-201ENST00000382723 NAP1L1P55209 391 aaKnown RBP28.58■■■□□ 2.17
MSX1-201ENST00000382723 SLC35F6Q8N357 371 aa28.58■■■□□ 2.17
MSX1-201ENST00000382723 ISCUQ9H1K1 167 aa28.58■■■□□ 2.17
MSX1-201ENST00000382723 PAEPP09466 180 aa28.57■■■□□ 2.16
MSX1-201ENST00000382723 GZMAP12544 262 aa28.57■■■□□ 2.16
MSX1-201ENST00000382723 RPL9P32969 192 aaKnown RBP28.57■■■□□ 2.16
MSX1-201ENST00000382723 NOMO2Q5JPE7 1267 aa28.57■■■□□ 2.16
MSX1-201ENST00000382723 TTC39CQ8N584 583 aa28.57■■■□□ 2.16
MSX1-201ENST00000382723 APPL2Q8NEU8 664 aa28.57■■■□□ 2.16
MSX1-201ENST00000382723 CYFIP2Q96F07 1278 aa28.57■■■□□ 2.16
MSX1-201ENST00000382723 INTUQ9ULD6 942 aa28.57■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms