RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 KCNA4P22459 653 aa16.68■□□□□ 0.26
COL17A1-202ENST00000369733 CIITAP33076 1130 aa16.68■□□□□ 0.26
COL17A1-202ENST00000369733 PHKA2P46019 1235 aa16.68■□□□□ 0.26
COL17A1-202ENST00000369733 CASP4P49662 377 aa16.68■□□□□ 0.26
COL17A1-202ENST00000369733 NLRP11P59045 1033 aaKnown RBP16.68■□□□□ 0.26
COL17A1-202ENST00000369733 NCOA4Q13772 614 aa16.68■□□□□ 0.26
COL17A1-202ENST00000369733 FRA10AC1Q70Z53 315 aa16.68■□□□□ 0.26
COL17A1-202ENST00000369733 FAM71DQ8N9W8 422 aa16.68■□□□□ 0.26
COL17A1-202ENST00000369733 KIAA0895Q8NCT3 520 aa16.68■□□□□ 0.26
COL17A1-202ENST00000369733 ATXN2LQ8WWM7 1075 aaKnown RBP16.68■□□□□ 0.26
COL17A1-202ENST00000369733 RUSC1Q9BVN2 902 aa16.68■□□□□ 0.26
COL17A1-202ENST00000369733 PSTPIP1O43586 416 aa16.68■□□□□ 0.26
COL17A1-202ENST00000369733 NME3Q13232 169 aa16.68■□□□□ 0.26
COL17A1-202ENST00000369733 SMTNL2Q2TAL5 461 aa16.68■□□□□ 0.26
COL17A1-202ENST00000369733 PI4K2AQ9BTU6 479 aa16.68■□□□□ 0.26
COL17A1-202ENST00000369733 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.68■□□□□ 0.26
COL17A1-202ENST00000369733 DEPDC5O75140 1603 aa16.68■□□□□ 0.26
COL17A1-202ENST00000369733 TNS3Q68CZ2 1445 aa16.68■□□□□ 0.26
COL17A1-202ENST00000369733 ANGPT2O15123 496 aa16.68■□□□□ 0.26
COL17A1-202ENST00000369733 MYL2P10916 166 aa16.68■□□□□ 0.26
COL17A1-202ENST00000369733 PDGFRAP16234 1089 aa16.68■□□□□ 0.26
COL17A1-202ENST00000369733 ATICP31939 592 aa16.68■□□□□ 0.26
COL17A1-202ENST00000369733 CAPRIN1Q14444 709 aaKnown RBP16.68■□□□□ 0.26
COL17A1-202ENST00000369733 MROH9Q5TGP6 573 aa16.68■□□□□ 0.26
COL17A1-202ENST00000369733 SNRNP48Q6IEG0 339 aaKnown RBP16.68■□□□□ 0.26
COL17A1-202ENST00000369733 PRPF38AQ8NAV1 312 aaKnown RBP16.68■□□□□ 0.26
COL17A1-202ENST00000369733 E7ENQ6 273 aa16.67■□□□□ 0.26
COL17A1-202ENST00000369733 PJA2O43164 708 aa16.67■□□□□ 0.26
COL17A1-202ENST00000369733 HLA-DRAP01903 254 aa16.67■□□□□ 0.26
COL17A1-202ENST00000369733 FLOT2Q14254 428 aa16.67■□□□□ 0.26
COL17A1-202ENST00000369733 PREPLQ4J6C6 727 aaPredicted RBP16.67■□□□□ 0.26
COL17A1-202ENST00000369733 RC3H1Q5TC82 1133 aaKnown RBP16.67■□□□□ 0.26
COL17A1-202ENST00000369733 TTC39CQ8N584 583 aa16.67■□□□□ 0.26
COL17A1-202ENST00000369733 CYGBQ8WWM9 190 aa16.67■□□□□ 0.26
COL17A1-202ENST00000369733 DUSP9Q99956 384 aaKnown RBP16.67■□□□□ 0.26
COL17A1-202ENST00000369733 SHCBP1LQ9BZQ2 653 aa16.67■□□□□ 0.26
COL17A1-202ENST00000369733 NDUFA13Q9P0J0 144 aa16.67■□□□□ 0.26
COL17A1-202ENST00000369733 DAGLAQ9Y4D2 1042 aa16.67■□□□□ 0.26
COL17A1-202ENST00000369733 E2F8A0AVK6 867 aa16.67■□□□□ 0.26
COL17A1-202ENST00000369733 DGKIO75912 1065 aa16.67■□□□□ 0.26
COL17A1-202ENST00000369733 RBP3P10745 1247 aa16.67■□□□□ 0.26
COL17A1-202ENST00000369733 ADORA2BP29275 332 aa16.67■□□□□ 0.26
COL17A1-202ENST00000369733 IFI35P80217 286 aaPredicted RBP16.67■□□□□ 0.26
COL17A1-202ENST00000369733 WASHC2DQ5SRD0 308 aa16.67■□□□□ 0.26
COL17A1-202ENST00000369733 CDYLQ9Y232 598 aa16.67■□□□□ 0.26
COL17A1-202ENST00000369733 Q3C1V9 767 aa16.67■□□□□ 0.26
COL17A1-202ENST00000369733 DSTYKQ6XUX3 929 aa16.67■□□□□ 0.26
COL17A1-202ENST00000369733 ZNF668Q96K58 619 aaPredicted RBP16.67■□□□□ 0.26
COL17A1-202ENST00000369733 CDY2AQ9Y6F7 541 aa16.67■□□□□ 0.26
COL17A1-202ENST00000369733 CDY1Q9Y6F8 540 aa16.67■□□□□ 0.26
COL17A1-202ENST00000369733 RSPH10B2B2RC85 870 aa16.67■□□□□ 0.26
COL17A1-202ENST00000369733 RSPH10BP0C881 870 aa16.67■□□□□ 0.26
COL17A1-202ENST00000369733 SERPINB10P48595 397 aa16.67■□□□□ 0.26
COL17A1-202ENST00000369733 IZUMO2Q6UXV1 221 aa16.67■□□□□ 0.26
COL17A1-202ENST00000369733 CATSPER4Q7RTX7 472 aa16.67■□□□□ 0.26
COL17A1-202ENST00000369733 MED24O75448 989 aa16.66■□□□□ 0.26
COL17A1-202ENST00000369733 CACNA2D1P54289 1103 aa16.66■□□□□ 0.26
COL17A1-202ENST00000369733 WDR72Q3MJ13 1102 aa16.66■□□□□ 0.26
COL17A1-202ENST00000369733 KCTD17Q8N5Z5 321 aa16.66■□□□□ 0.26
COL17A1-202ENST00000369733 ACSF2Q96CM8 615 aaPredicted RBP16.66■□□□□ 0.26
COL17A1-202ENST00000369733 MAGEB5Q9BZ81 275 aa16.66■□□□□ 0.26
COL17A1-202ENST00000369733 KIF17Q9P2E2 1029 aa16.66■□□□□ 0.26
COL17A1-202ENST00000369733 TNFRSF8P28908 595 aa16.66■□□□□ 0.26
COL17A1-202ENST00000369733 SCFD1Q8WVM8 642 aa16.66■□□□□ 0.26
COL17A1-202ENST00000369733 TMEM120AQ9BXJ8 343 aa16.66■□□□□ 0.26
COL17A1-202ENST00000369733 NAALADL1Q9UQQ1 740 aa16.66■□□□□ 0.26
COL17A1-202ENST00000369733 LRRC10BA6NIK2 292 aa16.66■□□□□ 0.26
COL17A1-202ENST00000369733 DEAF1O75398 565 aaPredicted RBP16.66■□□□□ 0.26
COL17A1-202ENST00000369733 MYBL2P10244 700 aa16.66■□□□□ 0.26
COL17A1-202ENST00000369733 HSPA13P48723 471 aa16.66■□□□□ 0.26
COL17A1-202ENST00000369733 ALDH5A1P51649 535 aaPredicted RBP16.66■□□□□ 0.26
COL17A1-202ENST00000369733 SNRPFP62306 86 aaKnown RBP16.66■□□□□ 0.26
COL17A1-202ENST00000369733 DPP9Q86TI2 863 aa16.66■□□□□ 0.26
COL17A1-202ENST00000369733 KIAA2013Q8IYS2 634 aa16.66■□□□□ 0.26
COL17A1-202ENST00000369733 TASP1Q9H6P5 420 aa16.66■□□□□ 0.26
COL17A1-202ENST00000369733 RSAD1Q9HA92 442 aa16.66■□□□□ 0.26
COL17A1-202ENST00000369733 KRT16P08779 473 aa16.66■□□□□ 0.26
COL17A1-202ENST00000369733 SF3B3Q15393 1217 aaKnown RBP16.66■□□□□ 0.26
COL17A1-202ENST00000369733 ANGPTL8Q6UXH0 198 aa16.66■□□□□ 0.26
COL17A1-202ENST00000369733 SRP72O76094 671 aaKnown RBP16.66■□□□□ 0.26
COL17A1-202ENST00000369733 AGAP3Q96P47 875 aa16.66■□□□□ 0.26
COL17A1-202ENST00000369733 HUS1O60921 280 aa16.65■□□□□ 0.26
COL17A1-202ENST00000369733 NDUFB10O96000 172 aa16.65■□□□□ 0.26
COL17A1-202ENST00000369733 DAB2P98082 770 aa16.65■□□□□ 0.26
COL17A1-202ENST00000369733 SLC44A4Q53GD3 710 aa16.65■□□□□ 0.26
COL17A1-202ENST00000369733 PODNQ7Z5L7 613 aa16.65■□□□□ 0.26
COL17A1-202ENST00000369733 FBXO33Q7Z6M2 555 aa16.65■□□□□ 0.26
COL17A1-202ENST00000369733 C1orf131Q8NDD1 294 aaKnown RBP16.65■□□□□ 0.26
COL17A1-202ENST00000369733 FBXO36Q8NEA4 188 aa16.65■□□□□ 0.26
COL17A1-202ENST00000369733 CAAP1Q9H8G2 361 aa16.65■□□□□ 0.26
COL17A1-202ENST00000369733 FAM237AA0A1B0GTK4 181 aa16.65■□□□□ 0.26
COL17A1-202ENST00000369733 DGAT1O75907 488 aa16.65■□□□□ 0.26
COL17A1-202ENST00000369733 ESRRBO95718 433 aa16.65■□□□□ 0.26
COL17A1-202ENST00000369733 TMED10P49755 219 aaKnown RBP16.65■□□□□ 0.26
COL17A1-202ENST00000369733 SETD3Q86TU7 594 aaPredicted RBP16.65■□□□□ 0.26
COL17A1-202ENST00000369733 CD302Q8IX05 232 aa16.65■□□□□ 0.26
COL17A1-202ENST00000369733 BEST2Q8NFU1 509 aa16.65■□□□□ 0.26
COL17A1-202ENST00000369733 PALMDQ9NP74 551 aa16.65■□□□□ 0.26
COL17A1-202ENST00000369733 BMP6P22004 513 aa16.65■□□□□ 0.26
COL17A1-202ENST00000369733 RPL21P46778 160 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms