RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 TMEM270Q6UE05 265 aa11.72□□□□□ -0.53
BRCC3-204ENST00000369462 FAM71AQ8IYT1 594 aa11.72□□□□□ -0.53
BRCC3-204ENST00000369462 SYN2Q92777 582 aaPredicted RBP11.72□□□□□ -0.53
BRCC3-204ENST00000369462 JAKMIP2Q96AA8 810 aa11.72□□□□□ -0.53
BRCC3-204ENST00000369462 FAXDC2Q96IV6 333 aa11.72□□□□□ -0.53
BRCC3-204ENST00000369462 BAG1Q99933 345 aaPredicted RBP11.72□□□□□ -0.53
BRCC3-204ENST00000369462 SDCBP2Q9H190 292 aa11.72□□□□□ -0.53
BRCC3-204ENST00000369462 GDAP2Q9NXN4 497 aa11.72□□□□□ -0.53
BRCC3-204ENST00000369462 I3L4J1 428 aa11.71□□□□□ -0.53
BRCC3-204ENST00000369462 CYB561D2O14569 222 aa11.71□□□□□ -0.53
BRCC3-204ENST00000369462 NRP1O14786 923 aa11.71□□□□□ -0.53
BRCC3-204ENST00000369462 CYP26A1O43174 497 aa11.71□□□□□ -0.53
BRCC3-204ENST00000369462 BRCC3P46736 316 aa11.71□□□□□ -0.53
BRCC3-204ENST00000369462 ASIC2Q16515 512 aa11.71□□□□□ -0.53
BRCC3-204ENST00000369462 SOWAHAQ2M3V2 549 aa11.71□□□□□ -0.53
BRCC3-204ENST00000369462 TIGD5Q53EQ6 642 aa11.71□□□□□ -0.53
BRCC3-204ENST00000369462 ZNF394Q53GI3 561 aa11.71□□□□□ -0.53
BRCC3-204ENST00000369462 IRF2BP2Q7Z5L9 587 aa11.71□□□□□ -0.53
BRCC3-204ENST00000369462 SENP8Q96LD8 212 aa11.71□□□□□ -0.53
BRCC3-204ENST00000369462 CHP1Q99653 195 aa11.71□□□□□ -0.53
BRCC3-204ENST00000369462 MTIF3Q9H2K0 278 aaKnown RBP11.71□□□□□ -0.53
BRCC3-204ENST00000369462 RC3H2Q9HBD1 1191 aaKnown RBP11.71□□□□□ -0.53
BRCC3-204ENST00000369462 ACP6Q9NPH0 428 aa11.71□□□□□ -0.53
BRCC3-204ENST00000369462 NT5C1B-RDH14C9J2C7 533 aa11.71□□□□□ -0.54
BRCC3-204ENST00000369462 HUS1O60921 280 aa11.71□□□□□ -0.54
BRCC3-204ENST00000369462 SLC11A1P49279 550 aa11.71□□□□□ -0.54
BRCC3-204ENST00000369462 CD300LGQ6UXG3 332 aa11.71□□□□□ -0.54
BRCC3-204ENST00000369462 DSTYKQ6XUX3 929 aa11.71□□□□□ -0.54
BRCC3-204ENST00000369462 APPL2Q8NEU8 664 aa11.71□□□□□ -0.54
BRCC3-204ENST00000369462 TRIM44Q96DX7 344 aaPredicted RBP11.71□□□□□ -0.54
BRCC3-204ENST00000369462 KCNF1Q9H3M0 494 aa11.71□□□□□ -0.54
BRCC3-204ENST00000369462 CYP3A43Q9HB55 503 aa11.71□□□□□ -0.54
BRCC3-204ENST00000369462 FAN1Q9Y2M0 1017 aa11.71□□□□□ -0.54
BRCC3-204ENST00000369462 FNDC1Q4ZHG4 1894 aaPredicted RBP11.71□□□□□ -0.54
BRCC3-204ENST00000369462 GALTP07902 379 aa11.7□□□□□ -0.54
BRCC3-204ENST00000369462 PLEKP08567 350 aaPredicted RBP11.7□□□□□ -0.54
BRCC3-204ENST00000369462 FERP16591 822 aa11.7□□□□□ -0.54
BRCC3-204ENST00000369462 ATP2A2P16615 1042 aaKnown RBP11.7□□□□□ -0.54
BRCC3-204ENST00000369462 CLCN1P35523 988 aa11.7□□□□□ -0.54
BRCC3-204ENST00000369462 ALDH7A1P49419 539 aaKnown RBP11.7□□□□□ -0.54
BRCC3-204ENST00000369462 KLHL30Q0D2K2 578 aa11.7□□□□□ -0.54
BRCC3-204ENST00000369462 MEA1Q16626 185 aa11.7□□□□□ -0.54
BRCC3-204ENST00000369462 TDRD12Q587J7 1177 aaKnown RBP11.7□□□□□ -0.54
BRCC3-204ENST00000369462 C9orf50Q5SZB4 431 aa11.7□□□□□ -0.54
BRCC3-204ENST00000369462 SPOUT1Q5T280 376 aaKnown RBP11.7□□□□□ -0.54
BRCC3-204ENST00000369462 TMEM139Q8IV31 216 aa11.7□□□□□ -0.54
BRCC3-204ENST00000369462 L1RE1Q9UN81 338 aa11.7□□□□□ -0.54
BRCC3-204ENST00000369462 TIMM13Q9Y5L4 95 aaPredicted RBP11.7□□□□□ -0.54
BRCC3-204ENST00000369462 TADA2AO75478 443 aa11.7□□□□□ -0.54
BRCC3-204ENST00000369462 AARSP49588 968 aaKnown RBP eCLIP11.7□□□□□ -0.54
BRCC3-204ENST00000369462 BCAR1P56945 870 aa11.7□□□□□ -0.54
BRCC3-204ENST00000369462 YWHAEP62258 255 aaKnown RBP11.7□□□□□ -0.54
BRCC3-204ENST00000369462 HGSNATQ68CP4 663 aa11.7□□□□□ -0.54
BRCC3-204ENST00000369462 SLC47A2Q86VL8 602 aa11.7□□□□□ -0.54
BRCC3-204ENST00000369462 FMNL3Q8IVF7 1028 aa11.7□□□□□ -0.54
BRCC3-204ENST00000369462 HERC6Q8IVU3 1022 aa11.7□□□□□ -0.54
BRCC3-204ENST00000369462 UBR7Q8N806 425 aa11.7□□□□□ -0.54
BRCC3-204ENST00000369462 RBBP8NLQ8NC74 664 aaPredicted RBP11.7□□□□□ -0.54
BRCC3-204ENST00000369462 MRPL45Q9BRJ2 306 aaKnown RBP11.7□□□□□ -0.54
BRCC3-204ENST00000369462 HAUS4Q9H6D7 363 aa11.7□□□□□ -0.54
BRCC3-204ENST00000369462 CWH43Q9H720 699 aa11.7□□□□□ -0.54
BRCC3-204ENST00000369462 ARHGAP20Q9P2F6 1191 aa11.7□□□□□ -0.54
BRCC3-204ENST00000369462 NRDCO43847 1150 aa11.69□□□□□ -0.54
BRCC3-204ENST00000369462 CALCAP01258 141 aa11.69□□□□□ -0.54
BRCC3-204ENST00000369462 SERPING1P05155 500 aa11.69□□□□□ -0.54
BRCC3-204ENST00000369462 CCDC172P0C7W6 258 aa11.69□□□□□ -0.54
BRCC3-204ENST00000369462 CCZ1BP86790 482 aa11.69□□□□□ -0.54
BRCC3-204ENST00000369462 CCZ1P86791 482 aaPredicted RBP11.69□□□□□ -0.54
BRCC3-204ENST00000369462 ORC1Q13415 861 aa11.69□□□□□ -0.54
BRCC3-204ENST00000369462 WSCD1Q658N2 575 aa11.69□□□□□ -0.54
BRCC3-204ENST00000369462 CYP26C1Q6V0L0 522 aa11.69□□□□□ -0.54
BRCC3-204ENST00000369462 DPH6Q7L8W6 267 aa11.69□□□□□ -0.54
BRCC3-204ENST00000369462 CMTR2Q8IYT2 770 aaKnown RBP11.69□□□□□ -0.54
BRCC3-204ENST00000369462 PDCL2Q8N4E4 241 aa11.69□□□□□ -0.54
BRCC3-204ENST00000369462 TOP6BLQ8N6T0 577 aa11.69□□□□□ -0.54
BRCC3-204ENST00000369462 CCDC112Q8NEF3 446 aa11.69□□□□□ -0.54
BRCC3-204ENST00000369462 OR6B3Q8NGW1 331 aa11.69□□□□□ -0.54
BRCC3-204ENST00000369462 SLC9A7Q96T83 725 aa11.69□□□□□ -0.54
BRCC3-204ENST00000369462 COLEC11Q9BWP8 271 aa11.69□□□□□ -0.54
BRCC3-204ENST00000369462 HMGXB4Q9UGU5 601 aa11.69□□□□□ -0.54
BRCC3-204ENST00000369462 ADAM28Q9UKQ2 775 aa11.69□□□□□ -0.54
BRCC3-204ENST00000369462 CNTN6Q9UQ52 1028 aa11.69□□□□□ -0.54
BRCC3-204ENST00000369462 INSL6Q9Y581 213 aa11.69□□□□□ -0.54
BRCC3-204ENST00000369462 SOWAHDA6NJG2 315 aa11.69□□□□□ -0.54
BRCC3-204ENST00000369462 TMEM189-UBE2V1I3L0A0 370 aa11.69□□□□□ -0.54
BRCC3-204ENST00000369462 CILPO75339 1184 aa11.69□□□□□ -0.54
BRCC3-204ENST00000369462 NDST1P52848 882 aa11.69□□□□□ -0.54
BRCC3-204ENST00000369462 PTK2Q05397 1052 aa11.69□□□□□ -0.54
BRCC3-204ENST00000369462 TMEM173Q86WV6 379 aaPredicted RBP11.69□□□□□ -0.54
BRCC3-204ENST00000369462 TMTC1Q8IUR5 882 aa11.69□□□□□ -0.54
BRCC3-204ENST00000369462 ADGRF2Q8IZF7 708 aa11.69□□□□□ -0.54
BRCC3-204ENST00000369462 PHOSPHO2Q8TCD6 241 aa11.69□□□□□ -0.54
BRCC3-204ENST00000369462 KBTBD7Q8WVZ9 684 aa11.69□□□□□ -0.54
BRCC3-204ENST00000369462 TWNKQ96RR1 684 aa11.69□□□□□ -0.54
BRCC3-204ENST00000369462 TMEM175Q9BSA9 504 aa11.69□□□□□ -0.54
BRCC3-204ENST00000369462 SLC24A3Q9HC58 644 aa11.69□□□□□ -0.54
BRCC3-204ENST00000369462 BARX2Q9UMQ3 279 aaPredicted RBP11.69□□□□□ -0.54
BRCC3-204ENST00000369462 MRPL42Q9Y6G3 142 aaKnown RBP11.69□□□□□ -0.54
BRCC3-204ENST00000369462 FECHP22830 423 aa11.68□□□□□ -0.54
BRCC3-204ENST00000369462 PRKCIP41743 596 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms