RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 CASQ2O14958 399 aaPredicted RBP3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 RASA4O43374 803 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 ZEB2O60315 1214 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 LPXNO60711 386 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 CLASP2O75122 1294 aaKnown RBP3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 UFL1O94874 794 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 LTFP02788 710 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 C1QTNF9P0C862 333 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 EEF2P13639 858 aaKnown RBP3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 POU3F2P20265 443 aaPredicted RBP3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 CCT2P78371 535 aaKnown RBP3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 AKAP17AQ02040 695 aaKnown RBP3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 SLBPQ14493 270 aaKnown RBP eCLIP3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 SLC14A2Q15849 920 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 INF2Q27J81 1249 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 SUPT20HL1Q3ZLR7 823 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 SLC45A4Q5BKX6 768 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 RRP12Q5JTH9 1297 aaKnown RBP3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 CFAP58Q5T655 872 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 TRIM68Q6AZZ1 485 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 RALYLQ86SE5 291 aaKnown RBP3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 ZAR1Q86SH2 424 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 VSIG1Q86XK7 387 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 MCATQ8IVS2 390 aaKnown RBP3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 SLC44A2Q8IWA5 706 aaPredicted RBP3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 TTC5Q8N0Z6 440 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 CBARPQ8N350 705 aaPredicted RBP3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 MYCT1Q8N699 235 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 TOP6BLQ8N6T0 577 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 TRIML1Q8N9V2 468 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 MFSD2AQ8NA29 543 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 BICD2Q8TD16 824 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 ADAMTS18Q8TE60 1221 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 ZNF606Q8WXB4 792 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 CENPIQ92674 756 aaPredicted RBP3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 COA7Q96BR5 231 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 CNDP2Q96KP4 475 aaKnown RBP3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 UBXN10Q96LJ8 280 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 TBC1D32Q96NH3 1257 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 LZTS2Q9BRK4 669 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 KIAA1683Q9H0B3 1180 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 CCDC68Q9H2F9 335 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 RWDD1Q9H446 243 aaPredicted RBP3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 ANLNQ9NQW6 1124 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 AIPL1Q9NZN9 384 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 GMIPQ9P107 970 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 KLHL3Q9UH77 587 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 IGSF10Q6WRI0 2623 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 RRN3P2A6NIE6 340 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 H7C0S8 307 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 NDC80O14777 642 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 DYNC1LI2O43237 492 aaPredicted RBP3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 NEMFO60524 1076 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 PQBP1O60828 265 aaKnown RBP3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 TBCAO75347 108 aaKnown RBP3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 DNTTP04053 509 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 CYP17A1P05093 508 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 CA3P07451 260 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 MYCLP12524 364 aaPredicted RBP3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 CSF2RAP15509 400 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 XBP1P17861 261 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 KCNJ6P48051 423 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 CYP27A1Q02318 531 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 TNFAIP2Q03169 654 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 NFIAQ12857 509 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 CDK5R2Q13319 367 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 SCARB2Q14108 478 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 SETMARQ53H47 684 aaPredicted RBP3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 PRAMEF13Q5VWM6 474 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 OVOS1Q6IE37 1185 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 CRTC1Q6UUV9 634 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 ENOSF1Q7L5Y1 443 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 KRT74Q7RTS7 529 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 KDELC2Q7Z4H8 507 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 DZIP1Q86YF9 867 aaKnown RBP3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 PCYOX1LQ8NBM8 494 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 GDPD5Q8WTR4 605 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 TMEM40Q8WWA1 233 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 ARHGEF2Q92974 986 aaKnown RBP3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 RADILQ96JH8 1075 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 ZNF396Q96N95 335 aaPredicted RBP3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 BBC3Q96PG8 261 aaPredicted RBP3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 NEK1Q96PY6 1258 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 PARK7Q99497 189 aaKnown RBP3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 CHCHD6Q9BRQ6 235 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 PI4K2AQ9BTU6 479 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 TTLL2Q9BWV7 592 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 MRPL4Q9BYD3 311 aaKnown RBP3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 TRPV4Q9HBA0 871 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 C1GALT1Q9NS00 363 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 HPF1Q9NWY4 346 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 MKS1Q9NXB0 559 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 CCDC39Q9UFE4 941 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 FBXL5Q9UKA1 691 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 CFAP45Q9UL16 551 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 APOBEC2Q9Y235 224 aaKnown RBP3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 C2CD3Q4AC94 2353 aa3.86□□□□□ -1.79
ECHDC1-205ENST00000368295 ZNF536O15090 1300 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 193.4 ms