RNA–Protein interactions for RNA: ENST00000336057.9

HDAC5-202, Transcript of histone deacetylase 5, humanhuman

TSL 1 (best) BASIC

Gene HDAC5, Length 5,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-202ENST00000336057 CYB5D1Q6P9G0 228 aa16.51■□□□□ 0.23
HDAC5-202ENST00000336057 MTHFD1LQ6UB35 978 aa16.51■□□□□ 0.23
HDAC5-202ENST00000336057 KCNK18Q7Z418 384 aa16.51■□□□□ 0.23
HDAC5-202ENST00000336057 SCN4BQ8IWT1 228 aa16.51■□□□□ 0.23
HDAC5-202ENST00000336057 TMC2Q8TDI7 906 aa16.51■□□□□ 0.23
HDAC5-202ENST00000336057 CCDC124Q96CT7 223 aaKnown RBP16.51■□□□□ 0.23
HDAC5-202ENST00000336057 ATXN7L3BQ96GX2 97 aa16.51■□□□□ 0.23
HDAC5-202ENST00000336057 CLGNO14967 610 aa16.51■□□□□ 0.23
HDAC5-202ENST00000336057 PPFIA2O75334 1257 aa16.51■□□□□ 0.23
HDAC5-202ENST00000336057 EEF1B2P24534 225 aaKnown RBP16.51■□□□□ 0.23
HDAC5-202ENST00000336057 ANO5Q75V66 913 aa16.51■□□□□ 0.23
HDAC5-202ENST00000336057 ANLNQ9NQW6 1124 aa16.51■□□□□ 0.23
HDAC5-202ENST00000336057 MTO1Q9Y2Z2 717 aaKnown RBP16.51■□□□□ 0.23
HDAC5-202ENST00000336057 SPATA31A6Q5VVP1 1343 aa16.51■□□□□ 0.23
HDAC5-202ENST00000336057 RGL2O15211 777 aa16.51■□□□□ 0.23
HDAC5-202ENST00000336057 KLRC4O43908 158 aa16.51■□□□□ 0.23
HDAC5-202ENST00000336057 GRAP2O75791 330 aa16.51■□□□□ 0.23
HDAC5-202ENST00000336057 ZBTB7AO95365 584 aa16.51■□□□□ 0.23
HDAC5-202ENST00000336057 GARTP22102 1010 aa16.51■□□□□ 0.23
HDAC5-202ENST00000336057 ITIH4Q14624 930 aa16.51■□□□□ 0.23
HDAC5-202ENST00000336057 NT5C1AQ9BXI3 368 aa16.51■□□□□ 0.23
HDAC5-202ENST00000336057 MAP3K20Q9NYL2 800 aaKnown RBP16.51■□□□□ 0.23
HDAC5-202ENST00000336057 VEGFAP15692 232 aaPredicted RBP16.51■□□□□ 0.23
HDAC5-202ENST00000336057 SERPINB4P48594 390 aa16.51■□□□□ 0.23
HDAC5-202ENST00000336057 C2CD6Q53TS8 623 aa16.51■□□□□ 0.23
HDAC5-202ENST00000336057 CYP4A22Q5TCH4 519 aa16.51■□□□□ 0.23
HDAC5-202ENST00000336057 TAS1R2Q8TE23 839 aa16.51■□□□□ 0.23
HDAC5-202ENST00000336057 CDC42EP4Q9H3Q1 356 aaKnown RBP16.51■□□□□ 0.23
HDAC5-202ENST00000336057 ERVK-9P63128 1117 aa16.5■□□□□ 0.23
HDAC5-202ENST00000336057 CUL3Q13618 768 aa16.5■□□□□ 0.23
HDAC5-202ENST00000336057 KIAA1841Q6NSI8 718 aa16.5■□□□□ 0.23
HDAC5-202ENST00000336057 CLMNQ96JQ2 1002 aa16.5■□□□□ 0.23
HDAC5-202ENST00000336057 BATF3Q9NR55 127 aa16.5■□□□□ 0.23
HDAC5-202ENST00000336057 ADA2Q9NZK5 511 aa16.5■□□□□ 0.23
HDAC5-202ENST00000336057 MARCOQ9UEW3 520 aaPredicted RBP16.5■□□□□ 0.23
HDAC5-202ENST00000336057 RRM1P23921 792 aa16.5■□□□□ 0.23
HDAC5-202ENST00000336057 DNAL1Q4LDG9 190 aa16.5■□□□□ 0.23
HDAC5-202ENST00000336057 RABGAP1LQ5R372 815 aa16.5■□□□□ 0.23
HDAC5-202ENST00000336057 SLC47A2Q86VL8 602 aa16.5■□□□□ 0.23
HDAC5-202ENST00000336057 FAM71DQ8N9W8 422 aa16.5■□□□□ 0.23
HDAC5-202ENST00000336057 DTX3LQ8TDB6 740 aa16.5■□□□□ 0.23
HDAC5-202ENST00000336057 FAM163AQ96GL9 167 aaPredicted RBP16.5■□□□□ 0.23
HDAC5-202ENST00000336057 SIK2Q9H0K1 926 aa16.5■□□□□ 0.23
HDAC5-202ENST00000336057 MANSC1Q9H8J5 431 aa16.5■□□□□ 0.23
HDAC5-202ENST00000336057 PCMTD2Q9NV79 361 aa16.5■□□□□ 0.23
HDAC5-202ENST00000336057 SCAF8Q9UPN6 1271 aaKnown RBP16.5■□□□□ 0.23
HDAC5-202ENST00000336057 FAM153BP0C7A2 387 aa16.5■□□□□ 0.23
HDAC5-202ENST00000336057 GPD1P21695 349 aa16.5■□□□□ 0.23
HDAC5-202ENST00000336057 FAM153CQ494X1 144 aa16.5■□□□□ 0.23
HDAC5-202ENST00000336057 FASTKD1Q53R41 847 aaKnown RBP16.5■□□□□ 0.23
HDAC5-202ENST00000336057 TEX2Q8IWB9 1127 aa16.5■□□□□ 0.23
HDAC5-202ENST00000336057 LRRC43Q8N309 656 aa16.5■□□□□ 0.23
HDAC5-202ENST00000336057 LRRC71Q8N4P6 559 aa16.5■□□□□ 0.23
HDAC5-202ENST00000336057 CYP2W1Q8TAV3 490 aa16.5■□□□□ 0.23
HDAC5-202ENST00000336057 AGR3Q8TD06 166 aa16.5■□□□□ 0.23
HDAC5-202ENST00000336057 MYOZ2Q9NPC6 264 aa16.5■□□□□ 0.23
HDAC5-202ENST00000336057 FAM153AQ9UHL3 310 aa16.5■□□□□ 0.23
HDAC5-202ENST00000336057 ARHGAP23Q9P227 1491 aa16.5■□□□□ 0.23
HDAC5-202ENST00000336057 TTC36A6NLP5 189 aa16.5■□□□□ 0.23
HDAC5-202ENST00000336057 FAM86B1E9PN63 330 aa16.5■□□□□ 0.23
HDAC5-202ENST00000336057 MAGEB2O15479 319 aa16.5■□□□□ 0.23
HDAC5-202ENST00000336057 FAM86B2P0C5J1 330 aa16.5■□□□□ 0.23
HDAC5-202ENST00000336057 SULT1E1P49888 294 aa16.5■□□□□ 0.23
HDAC5-202ENST00000336057 POP1Q99575 1024 aaKnown RBP16.5■□□□□ 0.23
HDAC5-202ENST00000336057 METTL5Q9NRN9 209 aaKnown RBP16.5■□□□□ 0.23
HDAC5-202ENST00000336057 ELF1P32519 619 aa16.49■□□□□ 0.23
HDAC5-202ENST00000336057 TSTA3Q13630 321 aaPredicted RBP16.49■□□□□ 0.23
HDAC5-202ENST00000336057 FASTKD5Q7L8L6 764 aaKnown RBP16.49■□□□□ 0.23
HDAC5-202ENST00000336057 ACSF2Q96CM8 615 aaPredicted RBP16.49■□□□□ 0.23
HDAC5-202ENST00000336057 TRPV6Q9H1D0 765 aa16.49■□□□□ 0.23
HDAC5-202ENST00000336057 GDF3Q9NR23 364 aa16.49■□□□□ 0.23
HDAC5-202ENST00000336057 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.49■□□□□ 0.23
HDAC5-202ENST00000336057 TPI1P60174 286 aa16.49■□□□□ 0.23
HDAC5-202ENST00000336057 MDH1BQ5I0G3 518 aa16.49■□□□□ 0.23
HDAC5-202ENST00000336057 TEDDM1Q5T9Z0 273 aa16.49■□□□□ 0.23
HDAC5-202ENST00000336057 TMCO4Q5TGY1 634 aa16.49■□□□□ 0.23
HDAC5-202ENST00000336057 ICA1LQ8NDH6 482 aa16.49■□□□□ 0.23
HDAC5-202ENST00000336057 CHST13Q8NET6 341 aa16.49■□□□□ 0.23
HDAC5-202ENST00000336057 EPAS1Q99814 870 aa16.49■□□□□ 0.23
HDAC5-202ENST00000336057 NOD2Q9HC29 1040 aa16.49■□□□□ 0.23
HDAC5-202ENST00000336057 SLC24A3Q9HC58 644 aa16.49■□□□□ 0.23
HDAC5-202ENST00000336057 PRMT7Q9NVM4 692 aaPredicted RBP16.49■□□□□ 0.23
HDAC5-202ENST00000336057 RASSF10A6NK89 507 aa16.49■□□□□ 0.23
HDAC5-202ENST00000336057 DDX3XO00571 662 aaKnown RBP eCLIP16.49■□□□□ 0.23
HDAC5-202ENST00000336057 CTCFP49711 727 aaPredicted RBP16.49■□□□□ 0.23
HDAC5-202ENST00000336057 WDR59Q6PJI9 974 aa16.49■□□□□ 0.23
HDAC5-202ENST00000336057 AGBL3Q8NEM8 1001 aa16.49■□□□□ 0.23
HDAC5-202ENST00000336057 IFT43Q96FT9 208 aa16.49■□□□□ 0.23
HDAC5-202ENST00000336057 AGAP3Q96P47 875 aa16.49■□□□□ 0.23
HDAC5-202ENST00000336057 SLC4A9Q96Q91 983 aa16.49■□□□□ 0.23
HDAC5-202ENST00000336057 KRT4P19013 534 aa16.48■□□□□ 0.23
HDAC5-202ENST00000336057 PPARGP37231 505 aaPredicted RBP16.48■□□□□ 0.23
HDAC5-202ENST00000336057 SCTRP47872 440 aa16.48■□□□□ 0.23
HDAC5-202ENST00000336057 EFTUD2Q15029 972 aaKnown RBP eCLIP16.48■□□□□ 0.237e-7■■■■■ 28.7
HDAC5-202ENST00000336057 C4orf19Q8IY42 314 aa16.48■□□□□ 0.23
HDAC5-202ENST00000336057 FRMD8Q9BZ67 464 aaPredicted RBP16.48■□□□□ 0.23
HDAC5-202ENST00000336057 NVLO15381 856 aaKnown RBP16.48■□□□□ 0.23
HDAC5-202ENST00000336057 STIP1P31948 543 aaKnown RBP16.48■□□□□ 0.23
HDAC5-202ENST00000336057 IL17AQ16552 155 aa16.48■□□□□ 0.23
HDAC5-202ENST00000336057 TTC39BQ5VTQ0 682 aaPredicted RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms