RNA–Protein interactions for RNA: ENST00000298564.14

TSPAN17-201, Transcript of tetraspanin 17, humanhuman

TSL 2 BASIC

Gene TSPAN17, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-201ENST00000298564 NINJ2Q9NZG7 142 aa18.88■□□□□ 0.61
TSPAN17-201ENST00000298564 WDR91A4D1P6 747 aa18.87■□□□□ 0.61
TSPAN17-201ENST00000298564 EPHB2P29323 1055 aa18.87■□□□□ 0.61
TSPAN17-201ENST00000298564 WDR4P57081 412 aaKnown RBP18.87■□□□□ 0.61
TSPAN17-201ENST00000298564 SP2Q02086 613 aa18.87■□□□□ 0.61
TSPAN17-201ENST00000298564 BRDTQ58F21 947 aaPredicted RBP18.87■□□□□ 0.61
TSPAN17-201ENST00000298564 MCPH1Q8NEM0 835 aa18.87■□□□□ 0.61
TSPAN17-201ENST00000298564 DDX1Q92499 740 aaKnown RBP18.87■□□□□ 0.61
TSPAN17-201ENST00000298564 POLR3FQ9H1D9 316 aaPredicted RBP18.87■□□□□ 0.61
TSPAN17-201ENST00000298564 KLHL11Q9NVR0 708 aa18.87■□□□□ 0.61
TSPAN17-201ENST00000298564 NKIRAS1Q9NYS0 192 aa18.87■□□□□ 0.61
TSPAN17-201ENST00000298564 PCK1P35558 622 aa18.87■□□□□ 0.61
TSPAN17-201ENST00000298564 GRIK3Q13003 919 aa18.87■□□□□ 0.61
TSPAN17-201ENST00000298564 TMEM63BQ5T3F8 832 aa18.87■□□□□ 0.61
TSPAN17-201ENST00000298564 ABHD15Q6UXT9 468 aa18.87■□□□□ 0.61
TSPAN17-201ENST00000298564 RUNDC3BQ96NL0 473 aa18.87■□□□□ 0.61
TSPAN17-201ENST00000298564 ANAPC5Q9UJX4 755 aa18.87■□□□□ 0.61
TSPAN17-201ENST00000298564 COL11A1P12107 1806 aaPredicted RBP18.87■□□□□ 0.61
TSPAN17-201ENST00000298564 DPPA5A6NC42 116 aa18.87■□□□□ 0.61
TSPAN17-201ENST00000298564 DKC1O60832 514 aaKnown RBP eCLIP18.87■□□□□ 0.61
TSPAN17-201ENST00000298564 UNC5CO95185 931 aa18.87■□□□□ 0.61
TSPAN17-201ENST00000298564 OAZ1P54368 228 aa18.87■□□□□ 0.61
TSPAN17-201ENST00000298564 RWDD2BP57060 319 aa18.87■□□□□ 0.61
TSPAN17-201ENST00000298564 USP37Q86T82 979 aa18.87■□□□□ 0.61
TSPAN17-201ENST00000298564 TAB3Q8N5C8 712 aaPredicted RBP18.87■□□□□ 0.61
TSPAN17-201ENST00000298564 ZNF516Q92618 1163 aa18.87■□□□□ 0.61
TSPAN17-201ENST00000298564 CD101Q93033 1021 aa18.87■□□□□ 0.61
TSPAN17-201ENST00000298564 TMEM109Q9BVC6 243 aa18.87■□□□□ 0.61
TSPAN17-201ENST00000298564 TEX13BQ9BXU2 312 aa18.87■□□□□ 0.61
TSPAN17-201ENST00000298564 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.87■□□□□ 0.61
TSPAN17-201ENST00000298564 KIAA1217Q5T5P2 1943 aa18.86■□□□□ 0.61
TSPAN17-201ENST00000298564 DOCK5Q9H7D0 1870 aa18.86■□□□□ 0.61
TSPAN17-201ENST00000298564 SPDYE5A6NIY4 337 aa18.86■□□□□ 0.61
TSPAN17-201ENST00000298564 GRIN3BO60391 1043 aa18.86■□□□□ 0.61
TSPAN17-201ENST00000298564 MTA2O94776 668 aa18.86■□□□□ 0.61
TSPAN17-201ENST00000298564 CYP1A2P05177 515 aa18.86■□□□□ 0.61
TSPAN17-201ENST00000298564 RRM1P23921 792 aa18.86■□□□□ 0.61
TSPAN17-201ENST00000298564 SSR1P43307 286 aaKnown RBP18.86■□□□□ 0.61
TSPAN17-201ENST00000298564 SERPINB12Q96P63 405 aa18.86■□□□□ 0.61
TSPAN17-201ENST00000298564 WNT8AQ9H1J5 351 aa18.86■□□□□ 0.61
TSPAN17-201ENST00000298564 ACAD9Q9H845 621 aa18.86■□□□□ 0.61
TSPAN17-201ENST00000298564 CHKBQ9Y259 395 aa18.86■□□□□ 0.61
TSPAN17-201ENST00000298564 GTF2H1P32780 548 aa18.86■□□□□ 0.61
TSPAN17-201ENST00000298564 FSTL1Q12841 308 aa18.86■□□□□ 0.61
TSPAN17-201ENST00000298564 PRKG1Q13976 671 aa18.86■□□□□ 0.61
TSPAN17-201ENST00000298564 CATSPERGQ6ZRH7 1159 aa18.86■□□□□ 0.61
TSPAN17-201ENST00000298564 TRMT10CQ7L0Y3 403 aaKnown RBP18.86■□□□□ 0.61
TSPAN17-201ENST00000298564 ZNF526Q8TF50 670 aaPredicted RBP18.86■□□□□ 0.61
TSPAN17-201ENST00000298564 TMEM143Q96AN5 459 aa18.86■□□□□ 0.61
TSPAN17-201ENST00000298564 PIDD1Q9HB75 910 aa18.86■□□□□ 0.61
TSPAN17-201ENST00000298564 ARHGAP28Q9P2N2 729 aa18.86■□□□□ 0.61
TSPAN17-201ENST00000298564 GRID1Q9ULK0 1009 aa18.86■□□□□ 0.61
TSPAN17-201ENST00000298564 PARP14Q460N5 1801 aa18.86■□□□□ 0.61
TSPAN17-201ENST00000298564 SPATA31C2B4DYI2 1134 aa18.85■□□□□ 0.61
TSPAN17-201ENST00000298564 GARTP22102 1010 aa18.85■□□□□ 0.61
TSPAN17-201ENST00000298564 CLUL1Q15846 466 aa18.85■□□□□ 0.61
TSPAN17-201ENST00000298564 CDCA2Q69YH5 1023 aaPredicted RBP18.85■□□□□ 0.61
TSPAN17-201ENST00000298564 LONP2Q86WA8 852 aa18.85■□□□□ 0.61
TSPAN17-201ENST00000298564 C12orf42Q96LP6 360 aa18.85■□□□□ 0.61
TSPAN17-201ENST00000298564 ROPN1BQ9BZX4 212 aaPredicted RBP18.85■□□□□ 0.61
TSPAN17-201ENST00000298564 ROPN1Q9HAT0 212 aaPredicted RBP18.85■□□□□ 0.61
TSPAN17-201ENST00000298564 ALG13Q9NP73 1137 aaKnown RBP18.85■□□□□ 0.61
TSPAN17-201ENST00000298564 BATF3Q9NR55 127 aa18.85■□□□□ 0.61
TSPAN17-201ENST00000298564 ANAPC7Q9UJX3 599 aa18.85■□□□□ 0.61
TSPAN17-201ENST00000298564 GTF3C4Q9UKN8 822 aa18.85■□□□□ 0.61
TSPAN17-201ENST00000298564 NFASCO94856 1347 aa18.85■□□□□ 0.61
TSPAN17-201ENST00000298564 PEX10O60683 326 aa18.85■□□□□ 0.61
TSPAN17-201ENST00000298564 AP1G2O75843 785 aa18.85■□□□□ 0.61
TSPAN17-201ENST00000298564 IVDP26440 423 aa18.85■□□□□ 0.61
TSPAN17-201ENST00000298564 ACOT2P49753 483 aa18.85■□□□□ 0.61
TSPAN17-201ENST00000298564 LIG4P49917 911 aa18.85■□□□□ 0.61
TSPAN17-201ENST00000298564 WNT7BP56706 349 aa18.85■□□□□ 0.61
TSPAN17-201ENST00000298564 ACAD10Q6JQN1 1059 aa18.85■□□□□ 0.61
TSPAN17-201ENST00000298564 CDHR1Q96JP9 859 aa18.85■□□□□ 0.61
TSPAN17-201ENST00000298564 NUDCD1Q96RS6 583 aa18.85■□□□□ 0.61
TSPAN17-201ENST00000298564 METTL5Q9NRN9 209 aaKnown RBP18.85■□□□□ 0.61
TSPAN17-201ENST00000298564 RLFQ13129 1914 aa18.84■□□□□ 0.61
TSPAN17-201ENST00000298564 DOCK1Q14185 1865 aa18.84■□□□□ 0.61
TSPAN17-201ENST00000298564 C19orf81C9J6K1 198 aa18.84■□□□□ 0.61
TSPAN17-201ENST00000298564 ZSCAN5DPP0CG00 497 aa18.84■□□□□ 0.61
TSPAN17-201ENST00000298564 RFX8Q6ZV50 586 aa18.84■□□□□ 0.61
TSPAN17-201ENST00000298564 GBP7Q8N8V2 638 aaPredicted RBP18.84■□□□□ 0.61
TSPAN17-201ENST00000298564 FAM13CQ8NE31 585 aa18.84■□□□□ 0.61
TSPAN17-201ENST00000298564 PHTF1Q9UMS5 762 aa18.84■□□□□ 0.61
TSPAN17-201ENST00000298564 WDR81Q562E7 1941 aa18.84■□□□□ 0.61
TSPAN17-201ENST00000298564 ATF2P15336 505 aa18.84■□□□□ 0.61
TSPAN17-201ENST00000298564 ATP4AP20648 1035 aa18.84■□□□□ 0.61
TSPAN17-201ENST00000298564 POLGP54098 1239 aaPredicted RBP18.84■□□□□ 0.61
TSPAN17-201ENST00000298564 RTP1P59025 263 aa18.84■□□□□ 0.61
TSPAN17-201ENST00000298564 FASTKD3Q14CZ7 662 aaKnown RBP18.84■□□□□ 0.61
TSPAN17-201ENST00000298564 MTFR1Q15390 333 aa18.84■□□□□ 0.61
TSPAN17-201ENST00000298564 GLIS1Q8NBF1 620 aa18.84■□□□□ 0.61
TSPAN17-201ENST00000298564 CPA5Q8WXQ8 436 aa18.84■□□□□ 0.61
TSPAN17-201ENST00000298564 ZCWPW1Q9H0M4 648 aa18.84■□□□□ 0.61
TSPAN17-201ENST00000298564 NUMBLQ9Y6R0 609 aa18.84■□□□□ 0.61
TSPAN17-201ENST00000298564 FZD9O00144 591 aa18.83■□□□□ 0.61
TSPAN17-201ENST00000298564 LGR5O75473 907 aa18.83■□□□□ 0.61
TSPAN17-201ENST00000298564 BANF1O75531 89 aa18.83■□□□□ 0.61
TSPAN17-201ENST00000298564 SUPT20HL2P0C7V6 817 aa18.83■□□□□ 0.61
TSPAN17-201ENST00000298564 TNNI1P19237 187 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms