RNA–Protein interactions for RNA: ENST00000268704.6

SPG7-201, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPG7, Length 3,076 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-201ENST00000268704 FAM182AQ5T1J6 154 aa18.04■□□□□ 0.48
SPG7-201ENST00000268704 C4orf19Q8IY42 314 aa18.04■□□□□ 0.48
SPG7-201ENST00000268704 GPD1LQ8N335 351 aa18.04■□□□□ 0.48
SPG7-201ENST00000268704 TTC8Q8TAM2 541 aa18.04■□□□□ 0.48
SPG7-201ENST00000268704 GRAMD1AQ96CP6 724 aa18.04■□□□□ 0.48
SPG7-201ENST00000268704 CFAP57Q96MR6 1250 aa18.04■□□□□ 0.48
SPG7-201ENST00000268704 LRMDAQ9H2I8 198 aa18.04■□□□□ 0.48
SPG7-201ENST00000268704 PSTPIP1O43586 416 aa18.04■□□□□ 0.48
SPG7-201ENST00000268704 LIASO43766 372 aa18.04■□□□□ 0.48
SPG7-201ENST00000268704 PEX11AO75192 247 aa18.04■□□□□ 0.48
SPG7-201ENST00000268704 NFX1Q12986 1120 aaKnown RBP18.04■□□□□ 0.48
SPG7-201ENST00000268704 SPARCL1Q14515 664 aa18.04■□□□□ 0.48
SPG7-201ENST00000268704 TDRD10Q5VZ19 366 aaKnown RBP18.04■□□□□ 0.48
SPG7-201ENST00000268704 MFSD7Q6UXD7 560 aa18.04■□□□□ 0.48
SPG7-201ENST00000268704 KATNAL2Q8IYT4 538 aa18.04■□□□□ 0.48
SPG7-201ENST00000268704 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.04■□□□□ 0.48
SPG7-201ENST00000268704 SLC7A6OSQ96CW6 309 aaPredicted RBP18.04■□□□□ 0.48
SPG7-201ENST00000268704 RAB3IPQ96QF0 476 aaPredicted RBP18.04■□□□□ 0.48
SPG7-201ENST00000268704 MAK16Q9BXY0 300 aaKnown RBP18.04■□□□□ 0.48
SPG7-201ENST00000268704 USH1CQ9Y6N9 552 aa18.04■□□□□ 0.48
SPG7-201ENST00000268704 LYPLA2O95372 231 aa18.03■□□□□ 0.48
SPG7-201ENST00000268704 HLA-DRAP01903 254 aa18.03■□□□□ 0.48
SPG7-201ENST00000268704 PIK3CAP42336 1068 aa18.03■□□□□ 0.48
SPG7-201ENST00000268704 YARSP54577 528 aaKnown RBP18.03■□□□□ 0.48
SPG7-201ENST00000268704 NOMO3P69849 1222 aa18.03■□□□□ 0.48
SPG7-201ENST00000268704 SYTL5Q8TDW5 730 aaPredicted RBP18.03■□□□□ 0.48
SPG7-201ENST00000268704 SMC6Q96SB8 1091 aa18.03■□□□□ 0.48
SPG7-201ENST00000268704 TBC1D10AQ9BXI6 508 aa18.03■□□□□ 0.48
SPG7-201ENST00000268704 DNALI1O14645 258 aaPredicted RBP18.03■□□□□ 0.48
SPG7-201ENST00000268704 IFNB1P01574 187 aa18.03■□□□□ 0.48
SPG7-201ENST00000268704 TAS1R3Q7RTX0 852 aa18.03■□□□□ 0.48
SPG7-201ENST00000268704 FAM160B2Q86V87 743 aa18.03■□□□□ 0.48
SPG7-201ENST00000268704 LONP2Q86WA8 852 aa18.03■□□□□ 0.48
SPG7-201ENST00000268704 LRRC8CQ8TDW0 803 aa18.03■□□□□ 0.48
SPG7-201ENST00000268704 CEP170P1Q96L14 293 aa18.03■□□□□ 0.48
SPG7-201ENST00000268704 FAM81BQ96LP2 452 aa18.03■□□□□ 0.48
SPG7-201ENST00000268704 APOBEC3GQ9HC16 384 aaKnown RBP18.03■□□□□ 0.48
SPG7-201ENST00000268704 NPHS2Q9NP85 383 aa18.03■□□□□ 0.48
SPG7-201ENST00000268704 SAE1Q9UBE0 346 aaPredicted RBP18.03■□□□□ 0.48
SPG7-201ENST00000268704 FEM1BQ9UK73 627 aa18.03■□□□□ 0.48
SPG7-201ENST00000268704 EDF1O60869 148 aaKnown RBP18.02■□□□□ 0.48
SPG7-201ENST00000268704 ENTPD5O75356 428 aa18.02■□□□□ 0.48
SPG7-201ENST00000268704 SMNDC1O75940 238 aaKnown RBP eCLIP18.02■□□□□ 0.48
SPG7-201ENST00000268704 CHRNA5P30532 468 aa18.02■□□□□ 0.48
SPG7-201ENST00000268704 SNRPFP62306 86 aaKnown RBP18.02■□□□□ 0.48
SPG7-201ENST00000268704 OVGP1Q12889 678 aa18.02■□□□□ 0.48
SPG7-201ENST00000268704 FAM43BQ6ZT52 329 aaPredicted RBP18.02■□□□□ 0.48
SPG7-201ENST00000268704 ILDR2Q71H61 639 aa18.02■□□□□ 0.48
SPG7-201ENST00000268704 RELL1Q8IUW5 271 aa18.02■□□□□ 0.48
SPG7-201ENST00000268704 OGFOD1Q8N543 542 aa18.02■□□□□ 0.48
SPG7-201ENST00000268704 BBOF1Q8ND07 529 aa18.02■□□□□ 0.48
SPG7-201ENST00000268704 C10orf82Q8WW14 230 aa18.02■□□□□ 0.48
SPG7-201ENST00000268704 KLF6Q99612 283 aaPredicted RBP18.02■□□□□ 0.48
SPG7-201ENST00000268704 TMEM121Q9BTD3 319 aa18.02■□□□□ 0.48
SPG7-201ENST00000268704 PCDHB4Q9Y5E5 795 aa18.02■□□□□ 0.48
SPG7-201ENST00000268704 MYH9P35579 1960 aaKnown RBP18.02■□□□□ 0.48
SPG7-201ENST00000268704 GOLGA8RI6L899 631 aa18.02■□□□□ 0.48
SPG7-201ENST00000268704 ZNF862O60290 1169 aa18.02■□□□□ 0.48
SPG7-201ENST00000268704 ABHD2P08910 425 aa18.02■□□□□ 0.48
SPG7-201ENST00000268704 GNA15P30679 374 aa18.02■□□□□ 0.48
SPG7-201ENST00000268704 PTGER2P43116 358 aa18.02■□□□□ 0.48
SPG7-201ENST00000268704 RAD23BP54727 409 aa18.02■□□□□ 0.48
SPG7-201ENST00000268704 NLRP11P59045 1033 aaKnown RBP18.02■□□□□ 0.48
SPG7-201ENST00000268704 RPS6P62753 249 aaKnown RBP18.02■□□□□ 0.48
SPG7-201ENST00000268704 FKBP1AP62942 108 aaKnown RBP18.02■□□□□ 0.48
SPG7-201ENST00000268704 PGM5Q15124 567 aa18.02■□□□□ 0.48
SPG7-201ENST00000268704 PDK4Q16654 411 aa18.02■□□□□ 0.48
SPG7-201ENST00000268704 TAF1BQ53T94 588 aaPredicted RBP18.02■□□□□ 0.48
SPG7-201ENST00000268704 LVRNQ6Q4G3 990 aa18.02■□□□□ 0.48
SPG7-201ENST00000268704 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.02■□□□□ 0.48
SPG7-201ENST00000268704 OTOAQ7RTW8 1153 aa18.02■□□□□ 0.48
SPG7-201ENST00000268704 EGFL6Q8IUX8 553 aa18.02■□□□□ 0.48
SPG7-201ENST00000268704 ALG13Q9NP73 1137 aaKnown RBP18.02■□□□□ 0.48
SPG7-201ENST00000268704 TMOD2Q9NZR1 351 aa18.02■□□□□ 0.48
SPG7-201ENST00000268704 SYNPO2Q9UMS6 1093 aa18.02■□□□□ 0.48
SPG7-201ENST00000268704 IVNS1ABPQ9Y6Y0 642 aa18.02■□□□□ 0.48
SPG7-201ENST00000268704 DOCK5Q9H7D0 1870 aa18.02■□□□□ 0.47
SPG7-201ENST00000268704 KRT1P04264 644 aa18.02■□□□□ 0.47
SPG7-201ENST00000268704 PTP4A2Q12974 167 aa18.02■□□□□ 0.47
SPG7-201ENST00000268704 PDIA2Q13087 525 aaKnown RBP18.02■□□□□ 0.47
SPG7-201ENST00000268704 PLEKHG4Q58EX7 1191 aa18.02■□□□□ 0.47
SPG7-201ENST00000268704 BRDTQ58F21 947 aaPredicted RBP18.02■□□□□ 0.47
SPG7-201ENST00000268704 ZBTB41Q5SVQ8 909 aa18.02■□□□□ 0.47
SPG7-201ENST00000268704 SUPT20HQ8NEM7 779 aa18.02■□□□□ 0.47
SPG7-201ENST00000268704 EXD1Q8NHP7 514 aa18.02■□□□□ 0.47
SPG7-201ENST00000268704 ZNF341Q9BYN7 854 aa18.02■□□□□ 0.47
SPG7-201ENST00000268704 RNPEPL1Q9HAU8 725 aa18.02■□□□□ 0.47
SPG7-201ENST00000268704 BATF3Q9NR55 127 aa18.02■□□□□ 0.47
SPG7-201ENST00000268704 DCTN4Q9UJW0 460 aa18.02■□□□□ 0.47
SPG7-201ENST00000268704 PPP1R12AO14974 1030 aaPredicted RBP18.01■□□□□ 0.47
SPG7-201ENST00000268704 VNN1O95497 513 aa18.01■□□□□ 0.47
SPG7-201ENST00000268704 KRT4P19013 534 aa18.01■□□□□ 0.47
SPG7-201ENST00000268704 GNAZP19086 355 aa18.01■□□□□ 0.47
SPG7-201ENST00000268704 ACO1P21399 889 aaKnown RBP18.01■□□□□ 0.47
SPG7-201ENST00000268704 LIN9Q5TKA1 542 aa18.01■□□□□ 0.47
SPG7-201ENST00000268704 C15orf39Q6ZRI6 1047 aa18.01■□□□□ 0.47
SPG7-201ENST00000268704 SPIRE2Q8WWL2 714 aa18.01■□□□□ 0.47
SPG7-201ENST00000268704 NAF1Q96HR8 494 aaKnown RBP18.01■□□□□ 0.47
SPG7-201ENST00000268704 SLITRK1Q96PX8 696 aa18.01■□□□□ 0.47
SPG7-201ENST00000268704 UBN1Q9NPG3 1134 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 165.9 ms