RNA–Protein interactions for RNA: YKR081C

RPF2, Transcript of Essential protein involved in rRNA maturation and ribosomal assembly, yeastyeast

Gene RPF2, Length 1,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF2YKR081C TOP2P06786 1428 aaKnown RBP1.5□□□□□ -2.17
RPF2YKR081C ECM5Q03214 1411 aa1.5□□□□□ -2.17
RPF2YKR081C RAD9P14737 1309 aa1.5□□□□□ -2.17
RPF2YKR081C VAR1P02381 398 aa1.5□□□□□ -2.17
RPF2YKR081C MATALPHA1P0CY06 175 aa1.5□□□□□ -2.17
RPF2YKR081C HMLALPHA1P0CY07 175 aa1.5□□□□□ -2.17
RPF2YKR081C MATALPHA2P0CY08 210 aa1.5□□□□□ -2.17
RPF2YKR081C HMLALPHA2P0CY09 210 aa1.5□□□□□ -2.17
RPF2YKR081C RPO26P20435 155 aa1.5□□□□□ -2.17
RPF2YKR081C LIA1P47120 325 aaKnown RBP1.5□□□□□ -2.17
RPF2YKR081C CGR1P53188 120 aa1.5□□□□□ -2.17
RPF2YKR081C NOP13P53883 403 aaKnown RBP RIP-Chip data1.5□□□□□ -2.17not detected
RPF2YKR081C YPD1Q07688 167 aa1.5□□□□□ -2.17
RPF2YKR081C RFU1Q08003 200 aa1.5□□□□□ -2.17
RPF2YKR081C YCL012CQ8J0M4 134 aa1.5□□□□□ -2.17
RPF2YKR081C TCB3Q03640 1545 aaKnown RBP1.5□□□□□ -2.17
RPF2YKR081C YSP2Q06681 1438 aa1.49□□□□□ -2.17
RPF2YKR081C SPT3P06844 337 aa1.49□□□□□ -2.17
RPF2YKR081C YCR016WP25617 290 aaKnown RBP1.49□□□□□ -2.17
RPF2YKR081C RPC19P28000 142 aaKnown RBP1.49□□□□□ -2.17
RPF2YKR081C YBL010CP32788 280 aa1.49□□□□□ -2.17
RPF2YKR081C CLG1P35190 452 aa1.49□□□□□ -2.17
RPF2YKR081C UMP1P38293 148 aa1.49□□□□□ -2.17
RPF2YKR081C POP4P38336 279 aa1.49□□□□□ -2.17
RPF2YKR081C VMA22P38784 181 aa1.49□□□□□ -2.17
RPF2YKR081C EGD2P38879 174 aaKnown RBP1.49□□□□□ -2.17
RPF2YKR081C RIO2P40160 425 aaKnown RBP1.49□□□□□ -2.17
RPF2YKR081C HPM1P40481 377 aa1.49□□□□□ -2.17
RPF2YKR081C LSM1P47017 172 aaKnown RBP1.49□□□□□ -2.17
RPF2YKR081C TMA22P47089 198 aaPredicted RBP1.49□□□□□ -2.17
RPF2YKR081C RBL2P48606 106 aaKnown RBP1.49□□□□□ -2.17
RPF2YKR081C NUP57P48837 541 aa1.49□□□□□ -2.17
RPF2YKR081C YIP3P53633 176 aa1.49□□□□□ -2.17
RPF2YKR081C RUB1Q03919 77 aa1.49□□□□□ -2.17
RPF2YKR081C CDC123Q05791 360 aa1.49□□□□□ -2.17
RPF2YKR081C GET4Q12125 312 aa1.49□□□□□ -2.17
RPF2YKR081C NCB2Q92317 146 aa1.49□□□□□ -2.17
RPF2YKR081C YCL001W-BQ96VH2 84 aa1.49□□□□□ -2.17
RPF2YKR081C SNT2P53127 1403 aa1.49□□□□□ -2.17
RPF2YKR081C NSP1P14907 823 aaKnown RBP1.48□□□□□ -2.17
RPF2YKR081C HSP30P25619 332 aa1.48□□□□□ -2.17
RPF2YKR081C UBC8P28263 218 aa1.48□□□□□ -2.17
RPF2YKR081C TFC1P32367 649 aa1.48□□□□□ -2.17
RPF2YKR081C SSO1P32867 290 aa1.48□□□□□ -2.17
RPF2YKR081C NTF2P33331 125 aaKnown RBP1.48□□□□□ -2.17
RPF2YKR081C LDB7P38210 180 aa1.48□□□□□ -2.17
RPF2YKR081C YAP3P38749 330 aa1.48□□□□□ -2.17
RPF2YKR081C CYC2P38909 366 aa1.48□□□□□ -2.17
RPF2YKR081C GIM4P40005 111 aaKnown RBP1.48□□□□□ -2.17
RPF2YKR081C YER076CP40049 302 aa1.48□□□□□ -2.17
RPF2YKR081C FMC1P40491 155 aa1.48□□□□□ -2.17
RPF2YKR081C YNR077CP53758 84 aa1.48□□□□□ -2.17
RPF2YKR081C CUS2P53830 285 aaPredicted RBP1.48□□□□□ -2.17
RPF2YKR081C TMA20P89886 181 aaPredicted RBP1.48□□□□□ -2.17
RPF2YKR081C UBC7Q02159 165 aa1.48□□□□□ -2.17
RPF2YKR081C PET117Q02771 107 aa1.48□□□□□ -2.17
RPF2YKR081C RPO31P04051 1460 aa1.48□□□□□ -2.17
RPF2YKR081C TSC11P40061 1430 aa1.48□□□□□ -2.17
RPF2YKR081C TRM732Q03496 1420 aa1.48□□□□□ -2.17
RPF2YKR081C MMS1Q06211 1407 aa1.48□□□□□ -2.17
RPF2YKR081C CDC33P07260 213 aaKnown RBP1.47□□□□□ -2.17
RPF2YKR081C YLR156WP0CE96 114 aa1.47□□□□□ -2.17
RPF2YKR081C YLR159WP0CE97 114 aa1.47□□□□□ -2.17
RPF2YKR081C YLR161WP0CE98 114 aa1.47□□□□□ -2.17
RPF2YKR081C PBN1P25580 416 aa1.47□□□□□ -2.17
RPF2YKR081C TCA17P32613 152 aa1.47□□□□□ -2.17
RPF2YKR081C GSP1P32835 219 aaKnown RBP1.47□□□□□ -2.17
RPF2YKR081C GSP2P32836 220 aaKnown RBP1.47□□□□□ -2.17
RPF2YKR081C SUI1P32911 108 aaKnown RBP1.47□□□□□ -2.17
RPF2YKR081C CPR5P35176 225 aa1.47□□□□□ -2.17
RPF2YKR081C FIG1P38224 298 aa1.47□□□□□ -2.17
RPF2YKR081C AME1P38313 324 aa1.47□□□□□ -2.17
RPF2YKR081C ERG28P40030 148 aa1.47□□□□□ -2.17
RPF2YKR081C RGI1P40043 161 aaPredicted RBP1.47□□□□□ -2.17
RPF2YKR081C FAR7P43592 221 aa1.47□□□□□ -2.17
RPF2YKR081C YGR042WP53227 271 aa1.47□□□□□ -2.17
RPF2YKR081C NOP19P53317 196 aaPredicted RBP1.47□□□□□ -2.17
RPF2YKR081C RTR2Q12378 196 aa1.47□□□□□ -2.17
RPF2YKR081C SEY1Q99287 776 aa1.47□□□□□ -2.17
RPF2YKR081C QCR7P00128 127 aa1.46□□□□□ -2.18
RPF2YKR081C KIN28P06242 306 aa1.46□□□□□ -2.18
RPF2YKR081C RHO1P06780 209 aaKnown RBP1.46□□□□□ -2.18
RPF2YKR081C CBF1P17106 351 aa1.46□□□□□ -2.18
RPF2YKR081C CNB1P25296 175 aa1.46□□□□□ -2.18
RPF2YKR081C LHP1P33399 275 aaKnown RBP1.46□□□□□ -2.18
RPF2YKR081C RPS1AP33442 255 aaKnown RBP1.46□□□□□ -2.18
RPF2YKR081C TAF14P35189 244 aa1.46□□□□□ -2.18
RPF2YKR081C MRPL28P36527 147 aa1.46□□□□□ -2.18
RPF2YKR081C ECM31P38122 312 aa1.46□□□□□ -2.18
RPF2YKR081C SEC72P39742 193 aaKnown RBP1.46□□□□□ -2.18
RPF2YKR081C SOK1P40317 901 aa1.46□□□□□ -2.18
RPF2YKR081C RFC2P40348 353 aa1.46□□□□□ -2.18
RPF2YKR081C YGR201CP42936 225 aa1.46□□□□□ -2.18
RPF2YKR081C YGL204CP53089 101 aa1.46□□□□□ -2.18
RPF2YKR081C YNL140CP53910 189 aa1.46□□□□□ -2.18
RPF2YKR081C YKR005CQ02203 525 aa1.46□□□□□ -2.18
RPF2YKR081C SWP1Q02795 286 aa1.46□□□□□ -2.18
RPF2YKR081C NHP10Q03435 203 aa1.46□□□□□ -2.18
RPF2YKR081C LDB18Q07887 179 aa1.46□□□□□ -2.18
RPF2YKR081C YLR036CQ07986 203 aa1.46□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 34.2 ms