RNA–Protein interactions for RNA: YKR059W

TIF1, Transcript of Translation initiation factor eIF4A, yeast

Gene TIF1, Length 1,188 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIF1	YKR059W	HOM6	P31116	359 aa	Known RBP	5.21	□□□□□ -1.58
TIF1	YKR059W	ALK2	P32789	676 aa	Predicted RBP	5.21	□□□□□ -1.58
TIF1	YKR059W	LHP1	P33399	275 aa	Known RBP	5.21	□□□□□ -1.58
TIF1	YKR059W	YKL102C	P34249	101 aa		5.21	□□□□□ -1.58
TIF1	YKR059W	YBR096W	P38256	230 aa		5.21	□□□□□ -1.58
TIF1	YKR059W	EGD2	P38879	174 aa	Known RBP	5.21	□□□□□ -1.58
TIF1	YKR059W	SEC72	P39742	193 aa	Known RBP	5.21	□□□□□ -1.58
TIF1	YKR059W	ADO1	P47143	340 aa	Known RBP	5.21	□□□□□ -1.58
TIF1	YKR059W	NUP57	P48837	541 aa		5.21	□□□□□ -1.58
TIF1	YKR059W	YTH1	Q06102	208 aa	Predicted RBP	5.21	□□□□□ -1.58
TIF1	YKR059W	YPL119C-A	Q3E751	87 aa		5.21	□□□□□ -1.58
TIF1	YKR059W	YKL183C-A	Q3E765	70 aa		5.21	□□□□□ -1.58
TIF1	YKR059W	MDN1	Q12019	4910 aa	Known RBP	5.21	□□□□□ -1.58
TIF1	YKR059W	YOL163W	P0CF20	169 aa		5.2	□□□□□ -1.58
TIF1	YKR059W	CCA1	P21269	546 aa		5.2	□□□□□ -1.58
TIF1	YKR059W	GIT1	P25346	518 aa		5.2	□□□□□ -1.58
TIF1	YKR059W	HSP30	P25619	332 aa		5.2	□□□□□ -1.58
TIF1	YKR059W	TRM5	P38793	499 aa		5.2	□□□□□ -1.58
TIF1	YKR059W	YER184C	P39961	794 aa		5.2	□□□□□ -1.58
TIF1	YKR059W	SMB1	P40018	196 aa	Known RBP	5.2	□□□□□ -1.58
TIF1	YKR059W	YJR085C	P47131	105 aa	Known RBP	5.2	□□□□□ -1.58
TIF1	YKR059W	CWC23	P52868	283 aa	Predicted RBP	5.2	□□□□□ -1.58
TIF1	YKR059W	YPS5	P53057	165 aa		5.2	□□□□□ -1.58
TIF1	YKR059W	YNL046W	P53956	172 aa		5.2	□□□□□ -1.58
TIF1	YKR059W	PRM15	Q03262	622 aa		5.2	□□□□□ -1.58
TIF1	YKR059W	YML018C	Q03730	393 aa		5.2	□□□□□ -1.58
TIF1	YKR059W	YPR098C	Q06089	161 aa		5.2	□□□□□ -1.58
TIF1	YKR059W	RPL28	P02406	149 aa	Known RBP	5.19	□□□□□ -1.58
TIF1	YKR059W	RPS23A	P0CX29	145 aa	Known RBP	5.19	□□□□□ -1.58
TIF1	YKR059W	RPS23B	P0CX30	145 aa		5.19	□□□□□ -1.58
TIF1	YKR059W	TIM12	P32830	109 aa		5.19	□□□□□ -1.58
TIF1	YKR059W	JEN1	P36035	616 aa		5.19	□□□□□ -1.58
TIF1	YKR059W	ECM14	P38836	430 aa		5.19	□□□□□ -1.58
TIF1	YKR059W	EGT2	P42835	1041 aa		5.19	□□□□□ -1.58
TIF1	YKR059W	RMR1	P53060	241 aa		5.19	□□□□□ -1.58
TIF1	YKR059W	ATG17	Q06410	417 aa		5.19	□□□□□ -1.58
TIF1	YKR059W	YPR202W	Q08993	238 aa		5.19	□□□□□ -1.58
TIF1	YKR059W	PPT2	Q12036	173 aa		5.19	□□□□□ -1.58
TIF1	YKR059W	YHR214C-E	Q8TGK0	99 aa		5.19	□□□□□ -1.58
TIF1	YKR059W	APA2	P22108	325 aa		5.18	□□□□□ -1.58
TIF1	YKR059W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	5.18	□□□□□ -1.58	not detected
TIF1	YKR059W	YBR241C	P38142	488 aa		5.18	□□□□□ -1.58
TIF1	YKR059W	PET8	P38921	284 aa		5.18	□□□□□ -1.58
TIF1	YKR059W	TPN1	P53099	579 aa		5.18	□□□□□ -1.58
TIF1	YKR059W	SED1	Q01589	338 aa		5.18	□□□□□ -1.58
TIF1	YKR059W	PBA1	Q05778	276 aa		5.18	□□□□□ -1.58
TIF1	YKR059W	ARC18	Q05933	178 aa	Known RBP	5.18	□□□□□ -1.58
TIF1	YKR059W	HEM25	Q07534	307 aa		5.18	□□□□□ -1.58
TIF1	YKR059W	IRC25	Q07951	179 aa		5.18	□□□□□ -1.58
TIF1	YKR059W	MSA1	Q08471	629 aa		5.18	□□□□□ -1.58
TIF1	YKR059W	KRE29	P40026	464 aa		5.17	□□□□□ -1.58
TIF1	YKR059W	MIC26	P50087	233 aa		5.17	□□□□□ -1.58
TIF1	YKR059W	CRH1	P53301	507 aa		5.17	□□□□□ -1.58
TIF1	YKR059W	YDR391C	Q04170	232 aa		5.17	□□□□□ -1.58
TIF1	YKR059W	GIM5	Q04493	163 aa		5.17	□□□□□ -1.58
TIF1	YKR059W	RTR2	Q12378	196 aa		5.17	□□□□□ -1.58
TIF1	YKR059W	IZH2	Q12442	317 aa		5.17	□□□□□ -1.58
TIF1	YKR059W	YMR316C-A	I2HB70	103 aa		5.16	□□□□□ -1.58
TIF1	YKR059W	PET494	P07390	489 aa	Predicted RBP	5.16	□□□□□ -1.58
TIF1	YKR059W	CDC10	P25342	322 aa	Known RBP	5.16	□□□□□ -1.58
TIF1	YKR059W	CLB6	P32943	380 aa		5.16	□□□□□ -1.58
TIF1	YKR059W	YBL059W	P34224	193 aa		5.16	□□□□□ -1.58
TIF1	YKR059W	CHL4	P38907	458 aa		5.16	□□□□□ -1.58
TIF1	YKR059W	MTW1	P39731	289 aa		5.16	□□□□□ -1.58
TIF1	YKR059W	PEX10	Q05568	337 aa		5.16	□□□□□ -1.58
TIF1	YKR059W	FIT3	Q08907	204 aa		5.16	□□□□□ -1.58
TIF1	YKR059W	AST1	P35183	429 aa		5.15	□□□□□ -1.59
TIF1	YKR059W	YNR066C	P53752	436 aa		5.15	□□□□□ -1.59
TIF1	YKR059W	DYN3	Q04949	312 aa		5.15	□□□□□ -1.59
TIF1	YKR059W	RNH202	Q05635	350 aa		5.15	□□□□□ -1.59
TIF1	YKR059W	DCN1	Q12395	269 aa		5.15	□□□□□ -1.59
TIF1	YKR059W	MRX4	Q12467	430 aa		5.15	□□□□□ -1.59
TIF1	YKR059W	YCL021W-A	Q96VH3	125 aa		5.15	□□□□□ -1.59
TIF1	YKR059W	IKI1	P38874	309 aa		5.14	□□□□□ -1.59
TIF1	YKR059W	GLR1	P41921	483 aa	Known RBP	5.14	□□□□□ -1.59
TIF1	YKR059W	RNH201	P53942	307 aa		5.14	□□□□□ -1.59
TIF1	YKR059W	DIA1	P54005	336 aa		5.14	□□□□□ -1.59
TIF1	YKR059W	YMR279C	Q03263	540 aa		5.14	□□□□□ -1.59
TIF1	YKR059W	DPM1	P14020	267 aa	Known RBP	5.13	□□□□□ -1.59
TIF1	YKR059W	BGL2	P15703	313 aa	Known RBP	5.13	□□□□□ -1.59
TIF1	YKR059W	DBF2	P22204	572 aa		5.13	□□□□□ -1.59
TIF1	YKR059W	NUF2	P33895	451 aa		5.13	□□□□□ -1.59
TIF1	YKR059W	MPM1	P40364	252 aa		5.13	□□□□□ -1.59
TIF1	YKR059W	ATG18	P43601	500 aa		5.13	□□□□□ -1.59
TIF1	YKR059W	BAT2	P47176	376 aa	Known RBP	5.13	□□□□□ -1.59
TIF1	YKR059W	TPS1	Q00764	495 aa	Known RBP	5.13	□□□□□ -1.59
TIF1	YKR059W	MIM1	Q08176	113 aa		5.13	□□□□□ -1.59
TIF1	YKR059W	MCT1	Q12283	360 aa		5.13	□□□□□ -1.59
TIF1	YKR059W	WTM1	Q12363	437 aa	Known RBP	5.13	□□□□□ -1.59
TIF1	YKR059W	YDR157W	A0A023PZE8	133 aa		5.12	□□□□□ -1.59
TIF1	YKR059W	RPS8A	P0CX39	200 aa	Known RBP	5.12	□□□□□ -1.59
TIF1	YKR059W	RPS8B	P0CX40	200 aa	Known RBP	5.12	□□□□□ -1.59
TIF1	YKR059W	ARO2	P28777	376 aa	Known RBP	5.12	□□□□□ -1.59
TIF1	YKR059W	MED8	P38304	223 aa		5.12	□□□□□ -1.59
TIF1	YKR059W	SUR2	P38992	349 aa		5.12	□□□□□ -1.59
TIF1	YKR059W	YER121W	P40076	114 aa		5.12	□□□□□ -1.59
TIF1	YKR059W	STB1	P42845	420 aa		5.12	□□□□□ -1.59
TIF1	YKR059W	NSA1	P53136	463 aa	Predicted RBP	5.12	□□□□□ -1.59
TIF1	YKR059W	SDS23	P53172	527 aa		5.12	□□□□□ -1.59
TIF1	YKR059W	YNR062C	P53748	327 aa		5.12	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 32.8 ms