RNA–Protein interactions for RNA: YHR154W

RTT107, Transcript of Protein implicated in Mms22-dependent DNA repair during S phase, yeastyeast

Gene RTT107, Length 3,213 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT107YHR154W EPT1P22140 391 aa1.66□□□□□ -2.14
RTT107YHR154W FUN26P31381 517 aa1.66□□□□□ -2.14
RTT107YHR154W GPX1P36014 167 aa1.66□□□□□ -2.14
RTT107YHR154W OM14P38325 134 aa1.66□□□□□ -2.14
RTT107YHR154W YHL044WP38727 235 aa1.66□□□□□ -2.14
RTT107YHR154W PTH1P38876 190 aaKnown RBP1.66□□□□□ -2.14
RTT107YHR154W EDC3P39998 551 aaKnown RBP1.66□□□□□ -2.14
RTT107YHR154W YIL086CP40503 102 aa1.66□□□□□ -2.14
RTT107YHR154W MCM22P47167 239 aa1.66□□□□□ -2.14
RTT107YHR154W OST3P48439 350 aa1.66□□□□□ -2.14
RTT107YHR154W FMP41P53889 259 aaKnown RBP1.66□□□□□ -2.14
RTT107YHR154W IGO1P53897 168 aa1.66□□□□□ -2.14
RTT107YHR154W YMD8Q03697 442 aa1.66□□□□□ -2.14
RTT107YHR154W YHC1Q05900 231 aaKnown RBP1.66□□□□□ -2.14
RTT107YHR154W YOR292CQ08743 309 aa1.66□□□□□ -2.14
RTT107YHR154W YPR063CQ12160 140 aa1.66□□□□□ -2.14
RTT107YHR154W AEP1P32493 518 aa1.66□□□□□ -2.14
RTT107YHR154W YER137CP40083 148 aaKnown RBP1.66□□□□□ -2.14
RTT107YHR154W RPE1P46969 238 aa1.66□□□□□ -2.14
RTT107YHR154W INP1Q03694 420 aa1.66□□□□□ -2.14
RTT107YHR154W SDH7Q04401 133 aa1.66□□□□□ -2.14
RTT107YHR154W FAR10Q06001 478 aa1.66□□□□□ -2.14
RTT107YHR154W YTH1Q06102 208 aaPredicted RBP1.66□□□□□ -2.14
RTT107YHR154W YDR018CQ12185 396 aa1.66□□□□□ -2.14
RTT107YHR154W AAT2P23542 418 aaKnown RBP1.66□□□□□ -2.14
RTT107YHR154W RPS1AP33442 255 aaKnown RBP1.66□□□□□ -2.14
RTT107YHR154W TIP20P33891 701 aa1.66□□□□□ -2.14
RTT107YHR154W NUF2P33895 451 aa1.66□□□□□ -2.14
RTT107YHR154W APS1P35181 156 aa1.66□□□□□ -2.14
RTT107YHR154W FRM2P37261 193 aa1.66□□□□□ -2.14
RTT107YHR154W OXA1P39952 402 aa1.66□□□□□ -2.14
RTT107YHR154W RPR2P40571 144 aa1.66□□□□□ -2.14
RTT107YHR154W YGR201CP42936 225 aa1.66□□□□□ -2.14
RTT107YHR154W YDC1Q02896 317 aa1.66□□□□□ -2.14
RTT107YHR154W MIM1Q08176 113 aa1.66□□□□□ -2.14
RTT107YHR154W YLR053CQ12026 108 aa1.66□□□□□ -2.14
RTT107YHR154W DAS2Q12084 232 aa1.66□□□□□ -2.14
RTT107YHR154W YPR011CQ12251 326 aa1.66□□□□□ -2.14
RTT107YHR154W TPI1P00942 248 aaKnown RBP1.65□□□□□ -2.14
RTT107YHR154W ATR1P13090 542 aa1.65□□□□□ -2.14
RTT107YHR154W IDP1P21954 428 aaKnown RBP1.65□□□□□ -2.14
RTT107YHR154W YCR025CP25352 136 aa1.65□□□□□ -2.14
RTT107YHR154W MDH3P32419 343 aaKnown RBP RIP-Chip data1.65□□□□□ -2.14not detected
RTT107YHR154W LSM4P40070 187 aaKnown RBP1.65□□□□□ -2.14
RTT107YHR154W ILM1P47155 203 aa1.65□□□□□ -2.14
RTT107YHR154W SWT21P53873 357 aaPredicted RBP1.65□□□□□ -2.14
RTT107YHR154W MRX11Q03079 207 aa1.65□□□□□ -2.14
RTT107YHR154W ADD37Q03233 198 aa1.65□□□□□ -2.14
RTT107YHR154W YMR166CQ03829 368 aa1.65□□□□□ -2.14
RTT107YHR154W YDR124WQ04608 324 aa1.65□□□□□ -2.14
RTT107YHR154W RFU1Q08003 200 aa1.65□□□□□ -2.14
RTT107YHR154W YLR050CQ12155 161 aaKnown RBP1.65□□□□□ -2.14
RTT107YHR154W IZH2Q12442 317 aa1.65□□□□□ -2.14
RTT107YHR154W YLR412C-AQ3E742 68 aa1.65□□□□□ -2.14
RTT107YHR154W MRS1P07266 363 aa1.65□□□□□ -2.15
RTT107YHR154W MRS3P10566 314 aa1.65□□□□□ -2.15
RTT107YHR154W MCK1P21965 375 aaKnown RBP1.65□□□□□ -2.15
RTT107YHR154W RNA14P25298 677 aaKnown RBP1.65□□□□□ -2.15
RTT107YHR154W OCH1P31755 480 aa1.65□□□□□ -2.15
RTT107YHR154W TFC1P32367 649 aa1.65□□□□□ -2.15
RTT107YHR154W UPS2P35200 230 aa1.65□□□□□ -2.15
RTT107YHR154W GLE2P40066 365 aa1.65□□□□□ -2.15
RTT107YHR154W YOL019WQ08157 551 aa1.65□□□□□ -2.15
RTT107YHR154W NSL1Q12143 216 aa1.65□□□□□ -2.15
RTT107YHR154W CYR1P08678 2026 aaKnown RBP1.65□□□□□ -2.15
RTT107YHR154W DYN1P36022 4092 aa1.65□□□□□ -2.15
RTT107YHR154W BUD23P25627 275 aaPredicted RBP1.64□□□□□ -2.15
RTT107YHR154W MGT1P26188 188 aa1.64□□□□□ -2.15
RTT107YHR154W POP8P38208 133 aa1.64□□□□□ -2.15
RTT107YHR154W BDH1P39714 382 aa1.64□□□□□ -2.15
RTT107YHR154W CAT5P41735 233 aa1.64□□□□□ -2.15
RTT107YHR154W MPA43P53583 542 aaPredicted RBP1.64□□□□□ -2.15
RTT107YHR154W SRY1P36007 326 aa1.64□□□□□ -2.15
RTT107YHR154W SMP1P38128 452 aa1.64□□□□□ -2.15
RTT107YHR154W ECM14P38836 430 aa1.64□□□□□ -2.15
RTT107YHR154W CHL4P38907 458 aa1.64□□□□□ -2.15
RTT107YHR154W FCY21P40039 528 aa1.64□□□□□ -2.15
RTT107YHR154W APS3P47064 194 aa1.64□□□□□ -2.15
RTT107YHR154W YGL118CP53132 145 aa1.64□□□□□ -2.15
RTT107YHR154W RPL15BP54780 204 aaPredicted RBP1.64□□□□□ -2.15
RTT107YHR154W RAV2Q03956 351 aa1.64□□□□□ -2.15
RTT107YHR154W PLP1Q04004 230 aa1.64□□□□□ -2.15
RTT107YHR154W HNT1Q04344 158 aaKnown RBP1.64□□□□□ -2.15
RTT107YHR154W EMI1Q04406 187 aa1.64□□□□□ -2.15
RTT107YHR154W YOL029CQ08187 201 aa1.64□□□□□ -2.15
RTT107YHR154W TMC1Q08422 150 aaPredicted RBP1.64□□□□□ -2.15
RTT107YHR154W PST1Q12355 444 aa1.64□□□□□ -2.15
RTT107YHR154W YPR170W-BP0C5R9 85 aa1.64□□□□□ -2.15
RTT107YHR154W SUI1P32911 108 aaKnown RBP1.64□□□□□ -2.15
RTT107YHR154W YKL075CP36083 450 aa1.64□□□□□ -2.15
RTT107YHR154W BUD13P46947 266 aaPredicted RBP1.64□□□□□ -2.15
RTT107YHR154W MDM34P53083 459 aa1.64□□□□□ -2.15
RTT107YHR154W ERV29P53337 310 aa1.64□□□□□ -2.15
RTT107YHR154W BOR1P53838 576 aa1.64□□□□□ -2.15
RTT107YHR154W NUP49Q02199 472 aa1.64□□□□□ -2.15
RTT107YHR154W MSA1Q08471 629 aa1.64□□□□□ -2.15
RTT107YHR154W RTR2Q12378 196 aa1.64□□□□□ -2.15
RTT107YHR154W RPL15AP05748 204 aaKnown RBP1.63□□□□□ -2.15
RTT107YHR154W CPA1P07258 411 aaKnown RBP1.63□□□□□ -2.15
RTT107YHR154W YCR023CP25351 611 aa1.63□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 54.5 ms