RNA–Protein interactions for RNA: YEL048C

TCA17, Transcript of Component of transport protein particle (TRAPP) complex II, yeastyeast

Gene TCA17, Length 459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TCA17YEL048C YLR031WQ07978 186 aa2.12□□□□□ -2.07
TCA17YEL048C YLR036CQ07986 203 aa2.12□□□□□ -2.07
TCA17YEL048C CMC2Q3E7A4 109 aa2.12□□□□□ -2.07
TCA17YEL048C YHR214C-EQ8TGK0 99 aa2.12□□□□□ -2.07
TCA17YEL048C IGO2Q9P305 131 aa2.12□□□□□ -2.07
TCA17YEL048C FBA1P14540 359 aaKnown RBP2.11□□□□□ -2.07
TCA17YEL048C MRPL17P36528 281 aa2.11□□□□□ -2.07
TCA17YEL048C ERV15P38312 142 aa2.11□□□□□ -2.07
TCA17YEL048C YHR180WP38868 163 aa2.11□□□□□ -2.07
TCA17YEL048C GVP36P40531 326 aaKnown RBP2.11□□□□□ -2.07
TCA17YEL048C ERG10P41338 398 aaKnown RBP2.11□□□□□ -2.07
TCA17YEL048C ARO80Q04052 950 aa2.11□□□□□ -2.07
TCA17YEL048C HNT1Q04344 158 aaKnown RBP2.11□□□□□ -2.07
TCA17YEL048C NOC4Q06512 552 aaPredicted RBP2.11□□□□□ -2.07
TCA17YEL048C YOL024WQ08172 172 aa2.11□□□□□ -2.07
TCA17YEL048C YOL160WQ08321 113 aa2.11□□□□□ -2.07
TCA17YEL048C MBF1O14467 151 aaKnown RBP2.1□□□□□ -2.07
TCA17YEL048C TIM9O74700 87 aa2.1□□□□□ -2.07
TCA17YEL048C MGT1P26188 188 aa2.1□□□□□ -2.07
TCA17YEL048C TRR1P29509 319 aaKnown RBP2.1□□□□□ -2.07
TCA17YEL048C SHE2P36068 246 aaKnown RBP RIP-Chip data2.1□□□□□ -2.07not detected
TCA17YEL048C PHO88P38264 188 aaPredicted RBP2.1□□□□□ -2.07
TCA17YEL048C SVP26P38869 228 aa2.1□□□□□ -2.07
TCA17YEL048C AIM2P39721 246 aa2.1□□□□□ -2.07
TCA17YEL048C FMP32P43557 207 aa2.1□□□□□ -2.07
TCA17YEL048C SKI6P46948 246 aaPredicted RBP2.1□□□□□ -2.07
TCA17YEL048C ERG25P53045 309 aa2.1□□□□□ -2.07
TCA17YEL048C YNL184CP53876 108 aa2.1□□□□□ -2.07
TCA17YEL048C NRK1P53915 240 aa2.1□□□□□ -2.07
TCA17YEL048C MRPS8Q03799 155 aa2.1□□□□□ -2.07
TCA17YEL048C GIM5Q04493 163 aa2.1□□□□□ -2.07
TCA17YEL048C PET9P18239 318 aaKnown RBP2.09□□□□□ -2.07
TCA17YEL048C TAH1P25638 111 aaPredicted RBP2.09□□□□□ -2.07
TCA17YEL048C YCR090CP25654 182 aaKnown RBP2.09□□□□□ -2.07
TCA17YEL048C YET1P35723 206 aa2.09□□□□□ -2.07
TCA17YEL048C YBR285WP38354 144 aa2.09□□□□□ -2.07
TCA17YEL048C YER034WP40022 185 aaKnown RBP2.09□□□□□ -2.07
TCA17YEL048C RPL33BP41056 107 aaKnown RBP2.09□□□□□ -2.07
TCA17YEL048C TMA22P47089 198 aaPredicted RBP2.09□□□□□ -2.07
TCA17YEL048C UBC12P52491 188 aa2.09□□□□□ -2.07
TCA17YEL048C DOC1P53068 250 aa2.09□□□□□ -2.07
TCA17YEL048C DYN3Q04949 312 aa2.09□□□□□ -2.07
TCA17YEL048C BOL1Q3E793 110 aa2.09□□□□□ -2.07
TCA17YEL048C YFR032C-BQ8TGU2 87 aa2.09□□□□□ -2.07
TCA17YEL048C SCL1P21243 252 aaKnown RBP2.08□□□□□ -2.08
TCA17YEL048C LSM4P40070 187 aaKnown RBP2.08□□□□□ -2.08
TCA17YEL048C TIR3P40552 269 aa2.08□□□□□ -2.08
TCA17YEL048C YNR062CP53748 327 aa2.08□□□□□ -2.08
TCA17YEL048C SNO1Q03144 224 aa2.08□□□□□ -2.08
TCA17YEL048C YMR315WQ04869 349 aaKnown RBP2.08□□□□□ -2.08
TCA17YEL048C FSF1Q12029 327 aaKnown RBP2.08□□□□□ -2.08
TCA17YEL048C ODC2Q99297 307 aa2.08□□□□□ -2.08
TCA17YEL048C QCR6P00127 147 aa2.07□□□□□ -2.08
TCA17YEL048C RPL35AP0CX84 120 aaKnown RBP2.07□□□□□ -2.08
TCA17YEL048C RPL35BP0CX85 120 aaKnown RBP2.07□□□□□ -2.08
TCA17YEL048C GCY1P14065 312 aaKnown RBP RIP-Chip data2.07□□□□□ -2.08not detected
TCA17YEL048C OCH1P31755 480 aa2.07□□□□□ -2.08
TCA17YEL048C ARP3P47117 449 aaKnown RBP2.07□□□□□ -2.08
TCA17YEL048C TDA4P47153 279 aa2.07□□□□□ -2.08
TCA17YEL048C JAC1P53193 184 aa2.07□□□□□ -2.08
TCA17YEL048C SPG3Q04398 127 aaPredicted RBP2.07□□□□□ -2.08
TCA17YEL048C YPR014CQ6B0W2 109 aa2.07□□□□□ -2.08
TCA17YEL048C CPA1P07258 411 aaKnown RBP2.06□□□□□ -2.08
TCA17YEL048C ATP15P21306 62 aa2.06□□□□□ -2.08
TCA17YEL048C TRX3P25372 127 aa2.06□□□□□ -2.08
TCA17YEL048C ECM4P36156 370 aa2.06□□□□□ -2.08
TCA17YEL048C MAK5P38112 773 aaPredicted RBP2.06□□□□□ -2.08
TCA17YEL048C YER134CP40081 178 aa2.06□□□□□ -2.08
TCA17YEL048C YNL217WP40152 326 aa2.06□□□□□ -2.08
TCA17YEL048C ARO8P53090 500 aaKnown RBP2.06□□□□□ -2.08
TCA17YEL048C GRX8Q05926 109 aa2.06□□□□□ -2.08
TCA17YEL048C DGA1Q08650 418 aa2.06□□□□□ -2.08
TCA17YEL048C SEC14P24280 304 aaKnown RBP2.05□□□□□ -2.08
TCA17YEL048C KDX1P36005 433 aa2.05□□□□□ -2.08
TCA17YEL048C DSE2P38844 325 aa2.05□□□□□ -2.08
TCA17YEL048C SRP14P38985 146 aa2.05□□□□□ -2.08
TCA17YEL048C VTC1P40046 129 aaRIP-Chip data2.05□□□□□ -2.08not detected
TCA17YEL048C YNL247WP53852 767 aaKnown RBP2.05□□□□□ -2.08
TCA17YEL048C PGA1P53896 198 aa2.05□□□□□ -2.08
TCA17YEL048C YLR460CP54007 376 aa2.05□□□□□ -2.08
TCA17YEL048C NUP49Q02199 472 aa2.05□□□□□ -2.08
TCA17YEL048C PLP1Q04004 230 aa2.05□□□□□ -2.08
TCA17YEL048C HPT1Q04178 221 aaKnown RBP2.05□□□□□ -2.08
TCA17YEL048C RPS24AP0CX31 135 aaKnown RBP2.04□□□□□ -2.08
TCA17YEL048C RPS24BP0CX32 135 aaKnown RBP2.04□□□□□ -2.08
TCA17YEL048C RAD51P25454 400 aa2.04□□□□□ -2.08
TCA17YEL048C AHC2P25649 128 aa2.04□□□□□ -2.08
TCA17YEL048C FMP23P38231 175 aa2.04□□□□□ -2.08
TCA17YEL048C YBR209WP38311 105 aa2.04□□□□□ -2.08
TCA17YEL048C YHR022CP38763 256 aa2.04□□□□□ -2.08
TCA17YEL048C SER2P42941 309 aa2.04□□□□□ -2.08
TCA17YEL048C BOL2P53082 120 aa2.04□□□□□ -2.08
TCA17YEL048C YIP3P53633 176 aa2.04□□□□□ -2.08
TCA17YEL048C YNL140CP53910 189 aa2.04□□□□□ -2.08
TCA17YEL048C YDR274CP87283 123 aa2.04□□□□□ -2.08
TCA17YEL048C AIM34Q03673 198 aa2.04□□□□□ -2.08
TCA17YEL048C SHH4Q06236 168 aa2.04□□□□□ -2.08
TCA17YEL048C YLR050CQ12155 161 aaKnown RBP2.04□□□□□ -2.08
TCA17YEL048C MPD1Q12404 318 aaKnown RBP2.04□□□□□ -2.08
TCA17YEL048C ATG40Q99325 256 aa2.04□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 42.8 ms